Trichomycterus rosablanca: 134309219
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Entry
134309219 CDS
T09921
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn04060
Cytokine-cytokine receptor interaction
trn04217
Necroptosis
trn04620
Toll-like receptor signaling pathway
trn04621
NOD-like receptor signaling pathway
trn04622
RIG-I-like receptor signaling pathway
trn04623
Cytosolic DNA-sensing pathway
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134309219
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134309219
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134309219
04621 NOD-like receptor signaling pathway
134309219
04622 RIG-I-like receptor signaling pathway
134309219
04623 Cytosolic DNA-sensing pathway
134309219
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134309219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134309219
Cytokines and neuropeptides [BR:
trn04052
]
Cytokines
Interferons
134309219
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Ribosomal_S15
HEF_HK
Motif
Other DBs
NCBI-GeneID:
134309219
NCBI-ProteinID:
XP_062846927
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Position
2:43366459..43369871
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AA seq
181 aa
AA seq
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MISLSCWNGAGGCTWMKSQNKASLSNFQVLSNSSIWHLQQACRHAVHDGSLSLAFPNKLY
NVVSQQQANDHILFILKTLKSVMKIYRRKYEEVGCDQHKLQIFLLDVDRQIVELEQCAKN
VVANKAQKRIFKKMETHFKRLISHLKKQDYSADGWNDIAGALLKHLRRLDLLATKTKASL
H
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcttagctgttggaacggcgcgggtggatgcacatggatgaaatcacagaat
aaagcttcactcagtaatttccaggttttaagcaacagctcgatttggcatcttcagcag
gcgtgtaggcatgctgtgcatgatggcagtttaagcttggcgttccccaacaaactgtac
aacgttgtatctcaacaacaggcaaatgatcacatactgtttattttgaaaactctaaaa
agtgtaatgaagatctatagaaggaaatatgaggaggtgggatgtgaccaacataaactg
cagattttcctccttgatgttgaccgtcaaatcgtggagttggagcaatgcgcaaaaaac
gttgtagccaataaagcacaaaaaagaatatttaagaagatggaaacgcactttaaacgt
ctgatttctcacctaaaaaagcaggattacagtgccgatggctggaacgacattgcaggt
gcgctgctgaaacatctcagacgactcgatttactggccaccaaaactaaagccagcctt
cattaa
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