Trichomycterus rosablanca: 134309230
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Entry
134309230 CDS
T09921
Name
(RefSeq) protein Tob2 isoform X1
KO
K14443
protein Tob/BTG
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134309230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134309230
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134309230
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134309230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
134309230
NCBI-ProteinID:
XP_062846947
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All DBs
Position
2:44626266..44627493
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AA seq
389 aa
AA seq
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MHLEVKVALNFIVSYLYNKLPRRRADLFGEELERILVSRFEGHWYPEAPLRGSAFRCLHL
GAYGDPVVDLAAKRSGLDTEEVRANVPPELNIWIDPYEVSYQIGEKGAVKVLYMEDPPGL
GGDSEIPDEIGLSEGDMELEEGKVLGFNPDAQVFVPIRSQSSPVMLPSVSNSPTAFCQGL
FSYAGPITPTDSTVHSNTSSPSPLSTAMPYPHPANQPISQPITFTTASFAATKFGSTKMR
KTSMGSGLVGGSGSIGAPQQRMLTHSPTLSSISPPGLVKHKPLSLSMHSLVGSVSSQLSP
NAKEFVYPASRGSFYFDTEHSPLTHNALFHVPPQGPVHTHGTFDPYSSPPPGQAIGVLSS
GGGISFMDGLGGYNLQYSSQAFQPVVLAN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcatttggaggtaaaggttgcactgaacttcatagtttcctatctatacaacaaactc
cctcgacgaagagcggatctgtttggggaggaactggagcggatcttggtgtcacgattt
gaaggacactggtacccggaggcgcctctacgtggatctgctttccgttgccttcatctt
ggagcctatggagaccctgtggtggacttggccgccaaaaggagtggactagacactgag
gaggtcagagcaaatgttcctccagaactcaacatctggattgacccttatgaagtatcc
tatcagatcggtgagaagggtgctgtcaaagtcctgtacatggaggaccctccaggttta
gggggtgattccgagataccagacgaaattgggctcagtgaaggtgatatggagctggaa
gagggaaaagttttggggttcaaccctgatgctcaggtttttgtacccatcagaagccag
tcatcaccagtcatgttaccatcagtctcaaattctcctacggcattctgccaaggcctt
ttcagctatgcaggcccgattactccaaccgattccactgtgcactcaaatacctcctct
ccatctccactcagtacagcgatgccctatcctcacccagctaaccaacccatctcccaa
ccaatcacctttaccacagccagctttgccgccaccaagttcggctccaccaaaatgagg
aagacgtccatgggaagtggtctagtgggtggatcaggtagcatcggtgcccctcagcag
cgaatgctcacccattcccctactttatcatccatatcgccacctgggctggtcaagcac
aaacctctttccctctccatgcactccttggttggatcggtttctagccaactgtccccc
aatgccaaagagtttgtttaccctgcctctcgagggtctttctactttgatacagaacat
tcacccttaacccacaacgctctgtttcatgtcccacctcaaggcccggtccatacacat
ggcacctttgacccatattccagcccaccaccaggccaagctattggtgttcttagcagt
ggcggtgggatttcctttatggatggcctaggtggctacaacctgcagtactccagccaa
gctttccaacctgtagtgttggccaactga
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