KEGG   Trichomycterus rosablanca: 134309402
Entry
134309402         CDS       T09921                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
trn  Trichomycterus rosablanca
Pathway
trn04620  Toll-like receptor signaling pathway
trn04621  NOD-like receptor signaling pathway
trn04622  RIG-I-like receptor signaling pathway
trn04623  Cytosolic DNA-sensing pathway
trn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:trn00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    134309402 (irf7)
   04621 NOD-like receptor signaling pathway
    134309402 (irf7)
   04622 RIG-I-like receptor signaling pathway
    134309402 (irf7)
   04623 Cytosolic DNA-sensing pathway
    134309402 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134309402 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:trn03000]
    134309402 (irf7)
Transcription factors [BR:trn03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    134309402 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 134309402
NCBI-ProteinID: XP_062847036
LinkDB
Position
1:26683242..26695139
AA seq 422 aa
MTPRSDHLIRPHFANWLIEQVQGGHYDGLYMIGKDTFRIPWKHNSRRDCRDEDNKIFQAW
AVVSGKILEYPNDRAKWKTNFRCALNSLTQFKLLQDHSKESKDPHKMYHIVWPENHQQSQ
TIHIKEMYSSADNGVEAMEYENLPNHMDTLHLSQQFAVQPWASYQEQNIDVSNNYIATSV
PDVQQTCLQNNMLAPAQQHYTTGLETPSLPNIYALEISITYRGEDMGKMCCQGPFVQLHS
QCDPSDLRGQSVPFPGTEKLSDQKQIQYTNRILDNIKRGLQLEVCQDGIFGYRQDKCNVF
VSTRDPAEIPNQPEPKKLPQNQKELLFSFDKYKKDLMDFKENRRGSPEYTICLCFGEKFP
DEKPIEKKLIIVKVVSLICRELHKAAQRDGASSLQNDNISLQFSHNSLFDLIEATFQLPT
AE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgactcccagatcagaccatctaataaggccacacttcgccaactggctcatagagcaa
gtgcaaggcggacactacgatggactttacatgatcggaaaggacacattccgcatcccg
tggaagcacaactccagaagagactgccgtgatgaagacaacaaaatattccaagcatgg
gctgtggttagtggcaagatccttgagtaccccaatgaccgagcaaaatggaaaaccaac
tttcgctgtgcactcaacagcctcacacagtttaagcttcttcaagaccactccaaggaa
tccaaggatccccataaaatgtatcacattgtctggcctgagaatcaccaacagagtcaa
actattcatattaaagaaatgtacagctcagcagacaatggagttgaagcaatggagtat
gaaaacctgccaaaccacatggacactttacatctaagtcaacagtttgcagtccaaccc
tgggcatcatatcaagagcaaaacatagatgtttcaaacaactatattgcaacctctgtg
ccagatgtgcagcagacttgccttcaaaataacatgctagctccagcacagcaacattac
actacaggtctcgagactcctagcctacctaatatttatgcactggagatctccataacc
tacaggggagaagatatgggaaagatgtgctgtcaaggtccatttgttcagcttcactcg
cagtgtgatccttctgacctaaggggccagtcagtgcctttccctggaacagagaaacta
agtgaccagaaacagattcagtacactaaccgcattctggacaacatcaaaaggggtctg
cagctggaggtatgccaagatggcatcttcggctaccgccaggacaagtgcaatgtgttc
gtcagcacacgggatcctgctgagatcccgaaccaaccagagcccaaaaagctgcctcag
aaccaaaaggagctgctgttcagctttgataaatacaagaaagatctaatggatttcaaa
gagaacaggcgtgggtctcctgagtacaccatctgtttgtgctttggtgaaaaatttcca
gacgaaaagcctatagagaaaaaactgatcatcgttaaggttgtgtctctgatttgccgt
gagcttcacaaagcagcgcagagagatggagcgtcatctctgcaaaatgacaacatcagc
ctccagttctcccataacagcctgtttgatcttattgaagccacattccaactacccaca
gcagagtga

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