Trichomycterus rosablanca: 134309402
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Entry
134309402 CDS
T09921
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
trn
Trichomycterus rosablanca
Pathway
trn04620
Toll-like receptor signaling pathway
trn04621
NOD-like receptor signaling pathway
trn04622
RIG-I-like receptor signaling pathway
trn04623
Cytosolic DNA-sensing pathway
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134309402 (irf7)
04621 NOD-like receptor signaling pathway
134309402 (irf7)
04622 RIG-I-like receptor signaling pathway
134309402 (irf7)
04623 Cytosolic DNA-sensing pathway
134309402 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134309402 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134309402 (irf7)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134309402 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134309402
NCBI-ProteinID:
XP_062847036
LinkDB
All DBs
Position
1:26683242..26695139
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AA seq
422 aa
AA seq
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MTPRSDHLIRPHFANWLIEQVQGGHYDGLYMIGKDTFRIPWKHNSRRDCRDEDNKIFQAW
AVVSGKILEYPNDRAKWKTNFRCALNSLTQFKLLQDHSKESKDPHKMYHIVWPENHQQSQ
TIHIKEMYSSADNGVEAMEYENLPNHMDTLHLSQQFAVQPWASYQEQNIDVSNNYIATSV
PDVQQTCLQNNMLAPAQQHYTTGLETPSLPNIYALEISITYRGEDMGKMCCQGPFVQLHS
QCDPSDLRGQSVPFPGTEKLSDQKQIQYTNRILDNIKRGLQLEVCQDGIFGYRQDKCNVF
VSTRDPAEIPNQPEPKKLPQNQKELLFSFDKYKKDLMDFKENRRGSPEYTICLCFGEKFP
DEKPIEKKLIIVKVVSLICRELHKAAQRDGASSLQNDNISLQFSHNSLFDLIEATFQLPT
AE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgactcccagatcagaccatctaataaggccacacttcgccaactggctcatagagcaa
gtgcaaggcggacactacgatggactttacatgatcggaaaggacacattccgcatcccg
tggaagcacaactccagaagagactgccgtgatgaagacaacaaaatattccaagcatgg
gctgtggttagtggcaagatccttgagtaccccaatgaccgagcaaaatggaaaaccaac
tttcgctgtgcactcaacagcctcacacagtttaagcttcttcaagaccactccaaggaa
tccaaggatccccataaaatgtatcacattgtctggcctgagaatcaccaacagagtcaa
actattcatattaaagaaatgtacagctcagcagacaatggagttgaagcaatggagtat
gaaaacctgccaaaccacatggacactttacatctaagtcaacagtttgcagtccaaccc
tgggcatcatatcaagagcaaaacatagatgtttcaaacaactatattgcaacctctgtg
ccagatgtgcagcagacttgccttcaaaataacatgctagctccagcacagcaacattac
actacaggtctcgagactcctagcctacctaatatttatgcactggagatctccataacc
tacaggggagaagatatgggaaagatgtgctgtcaaggtccatttgttcagcttcactcg
cagtgtgatccttctgacctaaggggccagtcagtgcctttccctggaacagagaaacta
agtgaccagaaacagattcagtacactaaccgcattctggacaacatcaaaaggggtctg
cagctggaggtatgccaagatggcatcttcggctaccgccaggacaagtgcaatgtgttc
gtcagcacacgggatcctgctgagatcccgaaccaaccagagcccaaaaagctgcctcag
aaccaaaaggagctgctgttcagctttgataaatacaagaaagatctaatggatttcaaa
gagaacaggcgtgggtctcctgagtacaccatctgtttgtgctttggtgaaaaatttcca
gacgaaaagcctatagagaaaaaactgatcatcgttaaggttgtgtctctgatttgccgt
gagcttcacaaagcagcgcagagagatggagcgtcatctctgcaaaatgacaacatcagc
ctccagttctcccataacagcctgtttgatcttattgaagccacattccaactacccaca
gcagagtga
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