KEGG   Trichomycterus rosablanca: 134309583
Entry
134309583         CDS       T09921                                 
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trn03019]
    134309583 (zc3h12ab)
Messenger RNA biogenesis [BR:trn03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     134309583 (zc3h12ab)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_4 zf-CCCH_2 UBA_N4BP1 zf-CCCH
Other DBs
NCBI-GeneID: 134309583
NCBI-ProteinID: XP_062847053
LinkDB
Position
1:13481193..13503756
AA seq 626 aa
MSIDVGPVSVYFPSVLDTYSWPDSHSTVCLSSSAISDSLVWGSPSEPRVEMKPNRPEEHP
ESQEEFQTQLDLFRKLGFSEAQVRAVLLKLGLNTDTNRVLGELIQAGVEGMEERVDSGIA
PGLASRVDHTGKGHGVSSLPAETEEEVEDEDAIRPIVIDGSNVAMSHGNKEVFSCLGIQL
AVKYFLDRGHTDITVFVPSWRREQPRPDVPITDQHILRELEKKKILVFTPSRRVAGKRVV
CYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVNDKFMLPDDPLG
RHGPTLENFLRKTPRAPKKLPCPYGKKCTYGIKCKFSHPGRAKQSHRSLADELREKAKMP
SLSHGPSSTSSGPTHGASLEEVLEQKLSLDHIGPLNKSHTSENVPLIKNIPHSASPKSPS
KRDRPGQYFQTGQDSIPSSSHEYLDSGLGSYESHCEHKCRGKPRKPKHHSDGWYRYPPSC
SCCSVQSMSSNPGYHHHNVAMASSQTPNVMLHSHPHYHSYGGYPAVNFGQFSVPCNYHHT
SVPPPHSGYWSEPYQAYPHPPPGPVQGDTNPWNPPMRPEREQVRKKLRAVFNSCLVDRVM
DMFPNLMDAQKLAAEILNLQSYEVAL
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagtatagatgttggtccagtctctgtctactttccttcagttttggatacgtactct
tggcctgactctcacagcacagtgtgtttgtcctcgtctgccatttctgattcacttgta
tggggatccccatccgaacctcgcgttgaaatgaagccgaatcggcccgaggagcacccg
gaatctcaggaggagtttcagactcagttggatctgttccggaagctgggcttttctgag
gcgcaggtccgggccgtcctgctaaagctgggcctcaacacagacaccaatcgtgttctg
ggagagctgattcaggctggagtagaggggatggaggagagagttgattcaggcattgct
ccaggacttgcttctcgtgtcgaccacaccgggaaaggtcacggtgtttcgtctttacct
gcggagacagaggaggaggtggaggacgaggatgctatcaggcctattgtgatagatggc
agcaacgttgctatgagccacggcaacaaggaagttttctcctgcctgggaatccaactg
gccgtgaagtatttcctggaccgagggcatacagacatcaccgtgttcgtgccctcgtgg
aggcgggagcagccgcgcccagacgtcccaatcactgatcagcacatacttcgggagctg
gaaaagaaaaagattctggtttttactccatcgagacgcgtggcaggaaagcgggtggta
tgctacgatgaccgcttcatcgtcaagctggcgtacgagtcggacggcatcatcgtatcc
aacgatacctatcgggacctgcagggggaaaggccagagtggaaacgcttcatagaggag
aggctgcttatgtactcgtttgtcaatgacaagttcatgcttccagacgatcccctcggc
agacacggacccactctggaaaactttctccgcaagactccacgagctcctaaaaagctg
ccgtgcccatacggtaagaaatgcacctatggtatcaagtgcaagttcagccacccagga
cgtgccaagcagtcccatcgttccttggcagatgaactgcgagaaaaagcaaagatgccc
tcactttcacatgggccatcctcaaccagctcaggtcccactcatggcgcctctcttgag
gaggtattggagcaaaaacttagtctagatcacattggaccactgaacaaatcccacaca
agcgagaacgtcccactgataaagaacatcccgcattctgcttcacccaagtccccttca
aaacgtgatcgacctgggcaatacttccaaacaggtcaggactccatcccttcttcatct
catgagtatctagactcaggtttgggctcatatgagtcccactgtgagcacaaatgtaga
ggaaaaccaagaaagcccaagcatcactcagatggatggtacagatacccaccatcctgc
agctgctgctctgtacagtccatgagctctaatccagggtaccatcaccacaatgtggca
atggcttcatcccaaactccgaatgtcatgctgcactctcacccacattatcactcatat
ggaggatacccagcagtaaactttggacaatttagcgtaccctgtaattaccaccacacc
agcgtgcctccccctcacagtggttactggtcagaaccataccaagcttatccccatcct
cctccaggaccagtgcagggtgataccaacccctggaacccaccaatgcgcccagaaagg
gagcaggtcaggaagaagctacgtgctgtttttaattcctgtcttgtagacagagtgatg
gacatgtttcccaacctgatggacgctcaaaaactggctgcggagatcctcaacttgcag
tcgtatgaggtggcactgtaa

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