Trichomycterus rosablanca: 134309583
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Entry
134309583 CDS
T09921
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134309583 (zc3h12ab)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134309583 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
134309583
NCBI-ProteinID:
XP_062847053
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Position
1:13481193..13503756
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AA seq
626 aa
AA seq
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MSIDVGPVSVYFPSVLDTYSWPDSHSTVCLSSSAISDSLVWGSPSEPRVEMKPNRPEEHP
ESQEEFQTQLDLFRKLGFSEAQVRAVLLKLGLNTDTNRVLGELIQAGVEGMEERVDSGIA
PGLASRVDHTGKGHGVSSLPAETEEEVEDEDAIRPIVIDGSNVAMSHGNKEVFSCLGIQL
AVKYFLDRGHTDITVFVPSWRREQPRPDVPITDQHILRELEKKKILVFTPSRRVAGKRVV
CYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVNDKFMLPDDPLG
RHGPTLENFLRKTPRAPKKLPCPYGKKCTYGIKCKFSHPGRAKQSHRSLADELREKAKMP
SLSHGPSSTSSGPTHGASLEEVLEQKLSLDHIGPLNKSHTSENVPLIKNIPHSASPKSPS
KRDRPGQYFQTGQDSIPSSSHEYLDSGLGSYESHCEHKCRGKPRKPKHHSDGWYRYPPSC
SCCSVQSMSSNPGYHHHNVAMASSQTPNVMLHSHPHYHSYGGYPAVNFGQFSVPCNYHHT
SVPPPHSGYWSEPYQAYPHPPPGPVQGDTNPWNPPMRPEREQVRKKLRAVFNSCLVDRVM
DMFPNLMDAQKLAAEILNLQSYEVAL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagatgttggtccagtctctgtctactttccttcagttttggatacgtactct
tggcctgactctcacagcacagtgtgtttgtcctcgtctgccatttctgattcacttgta
tggggatccccatccgaacctcgcgttgaaatgaagccgaatcggcccgaggagcacccg
gaatctcaggaggagtttcagactcagttggatctgttccggaagctgggcttttctgag
gcgcaggtccgggccgtcctgctaaagctgggcctcaacacagacaccaatcgtgttctg
ggagagctgattcaggctggagtagaggggatggaggagagagttgattcaggcattgct
ccaggacttgcttctcgtgtcgaccacaccgggaaaggtcacggtgtttcgtctttacct
gcggagacagaggaggaggtggaggacgaggatgctatcaggcctattgtgatagatggc
agcaacgttgctatgagccacggcaacaaggaagttttctcctgcctgggaatccaactg
gccgtgaagtatttcctggaccgagggcatacagacatcaccgtgttcgtgccctcgtgg
aggcgggagcagccgcgcccagacgtcccaatcactgatcagcacatacttcgggagctg
gaaaagaaaaagattctggtttttactccatcgagacgcgtggcaggaaagcgggtggta
tgctacgatgaccgcttcatcgtcaagctggcgtacgagtcggacggcatcatcgtatcc
aacgatacctatcgggacctgcagggggaaaggccagagtggaaacgcttcatagaggag
aggctgcttatgtactcgtttgtcaatgacaagttcatgcttccagacgatcccctcggc
agacacggacccactctggaaaactttctccgcaagactccacgagctcctaaaaagctg
ccgtgcccatacggtaagaaatgcacctatggtatcaagtgcaagttcagccacccagga
cgtgccaagcagtcccatcgttccttggcagatgaactgcgagaaaaagcaaagatgccc
tcactttcacatgggccatcctcaaccagctcaggtcccactcatggcgcctctcttgag
gaggtattggagcaaaaacttagtctagatcacattggaccactgaacaaatcccacaca
agcgagaacgtcccactgataaagaacatcccgcattctgcttcacccaagtccccttca
aaacgtgatcgacctgggcaatacttccaaacaggtcaggactccatcccttcttcatct
catgagtatctagactcaggtttgggctcatatgagtcccactgtgagcacaaatgtaga
ggaaaaccaagaaagcccaagcatcactcagatggatggtacagatacccaccatcctgc
agctgctgctctgtacagtccatgagctctaatccagggtaccatcaccacaatgtggca
atggcttcatcccaaactccgaatgtcatgctgcactctcacccacattatcactcatat
ggaggatacccagcagtaaactttggacaatttagcgtaccctgtaattaccaccacacc
agcgtgcctccccctcacagtggttactggtcagaaccataccaagcttatccccatcct
cctccaggaccagtgcagggtgataccaacccctggaacccaccaatgcgcccagaaagg
gagcaggtcaggaagaagctacgtgctgtttttaattcctgtcttgtagacagagtgatg
gacatgtttcccaacctgatggacgctcaaaaactggctgcggagatcctcaacttgcag
tcgtatgaggtggcactgtaa
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