Trichomycterus rosablanca: 134309656
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Entry
134309656 CDS
T09921
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
trn
Trichomycterus rosablanca
Pathway
trn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134309656 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134309656 (abcc8)
Transporters [BR:
trn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
134309656 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
nSTAND1
AAA_23
RsgA_GTPase
TraD_N
Motif
Other DBs
NCBI-GeneID:
134309656
NCBI-ProteinID:
XP_062847056
LinkDB
All DBs
Position
1:complement(28676395..28757507)
Genome browser
AA seq
1580 aa
AA seq
DB search
MSLSFCGSENNSIAYNVDRGVLNNGCFVDALSLVPHVFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPACLAFMAAITS
IVYYHNIETSNFPKLLMALLIYWVMAFITKTIKFAKYTEHSIGMRQLRYCLTVLLVLLYG
LLLAVEINVILGRRYVCFAHATEVKPPEDLQDLGVRFLQPFVNLLSKSTYWWMNTFITSA
HRRPIDLKVIGKLPIAMRALTNYLKLRRAFEAQKRPNGLQPQGPQWIWRALRKAFGKPLI
LSITFRFLADLLGFAGPLCISGIVHHISKKNRTIQQPVQFLGIYFISSQEFLANAYVLAV
LLFFALLLQRTFLQASYYTAIQTGINLRGAIQTKIYNKIMRLSTSNMSMGEMTMGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIALLAPVQYFVATK
LSQAQKSTLEYSSERLKKTNELLRGIKLLKLYSWEHIFCSSVEETRGKELTSLQSFALYT
SVSIFMNAAIPIAAVLITFAVHVHLADDSDLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALVSAQKLSEFFASDEIGEEQESKTTITAAPTNHSNYQALPLKVVNRKHPVREDWTKY
GLQSEQYIETAAEEDTDICIKITSGYFSWTDGAPTLSNVNIKIPFGQLTMIVGQVGCGKS
SLLLAALGEMQRISGIVTWNSMPKLDSDGDESPDASPDEETRKSSAVAYASQKPWLLNAS
LVENITFEMPLIKQRYKTVIEACSLQPDIDILPQGDQTEIGGRGIILSGGQRQRISVARA
LYQTTNVVFLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTHKLQYLPHADWIIAM
KDGMIQTEGTLKDIQNSEPKLFEQWKALMHRQGQEFEKETVAESTTVLERKNLRRAMYSR
EALKTEEEEEEETPESDDEDNLSQVMRQRATIPWHSCGKYLSSAGLLLLPLLLLSQILKH
SIMVAIDVWLAHWTSDVIHAKINAVLHNCTLVQDCGFSHSSYLLVFSMLCCLGIVLCLVT
SVAAEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGSLLNRFSADINTIDQHIPSTLEC
LIRSTLLCVSALGVISYVTPVFLIALAPLAIVCYFIQKYFRVAFKDLQQLEDSTQLPLLS
HFSETVEGLTTIRAFRYEPRFRQRLLDLTDANNVASLFLTAANRWLEVRMEYIGACIVLI
AAVASITNSLYNHLSTGLVGLGLTSALMVSNYLNWMVRNLADMEVQLGAVKRINNLLKTE
PENYEGLLSASQVPDGWPQKGEIQIQNLSVRYDSTLKPVLKHVNAHIRPGQKVGICGRTG
SGKSSFSLAFFRMVDAFEGRIIIDDIDIAKLPLQTLRSRFSIILQDPILFSGTIRFNLDP
EMKAIDSMLWEALEIAQLKPVVQTLPGGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSI
LIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADLVIVMKRGEILEYDK
PDVLLSTEGSTFASFVQADK
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtccttctgtggaagtgagaacaactccattgcctacaatgtagatcgaggc
gtgcttaacaatggatgctttgtagatgccctttctctggtaccccatgtctttctgctc
ttcatcaccttccccattctatttataggatggggaagccagagctccaaggttcacatc
catcacagtacctggctacattttcctggacacaatctgcgctggatcctgaccttcatt
ctcctctttgtgctagtgtgtgagattgcagagggcattgtctctgatgggttcacacag
tctcttcatctgcacctctacatgcctgcatgtctggctttcatggctgctataacttct
atagtctactaccacaacatagagacctctaactttcctaaactgctaatggctttgctg
atttattgggtcatggcgtttatcactaagaccatcaaatttgccaagtacacagagcac
agcattggtatgagacagctgcgttattgcttgactgttctcctcgtgctgctgtatgga
ctgctactggctgtggagatcaacgtcatattgggaaggcgctatgtatgtttcgctcac
gccactgaagtaaagcctcccgaagacctgcaggacctgggtgtgcgctttctgcagcca
ttcgtcaacctcctctcaaaaagcacatactggtggatgaacactttcatcacatccgca
cacagacgacccattgaccttaaggtcattggcaaacttcccattgccatgagggcactc
actaattacctgaagctacgcagagcattcgaagctcaaaagaggcctaatggtctgcag
cctcagggacctcagtggatttggagggctctgcgtaaggcatttggaaaacccttaatc
ctgagcatcaccttccggtttcttgctgacctgctgggttttgctgggccgctctgcata
tcaggaattgttcaccacatcagcaaaaagaaccgaaccattcagcaaccagtccagttt
ttggggatctattttatctcctcacaggagtttctggctaatgcatatgttcttgctgtg
ttgctcttcttcgcattgcttctgcaaagaacatttctgcaggcctcctactacactgcc
atccagactggcatcaatctgagaggagctatacagacaaagatctacaataagatcatg
cgtctaagcacctccaacatgtctatgggggagatgacaatgggtcagatctgcaaccta
gtagccatagacaccaaccagctgatgtggttcttcttcctttgccccaacctgtgggcc
atgccagtacagatcatagttggtgtgattttgctctactacctgctgggaataagtgcc
ttgataggagctactgtgattgccctcctggcccctgtacagtactttgtggctaccaaa
ttgtctcaagcacagaaaagcaccctggaatactccagtgaacggttgaaaaaaaccaat
gagctgttacgtggcatcaagctactaaagctttactcatgggagcacatcttctgttct
agtgtggaggagaccaggggaaaagagcttaccagcctgcagtcatttgctctctacacc
tctgtctctatattcatgaatgccgctatccccattgcagcagttcttattacgtttgcg
gtccacgttcacctggcggatgattcagatctgtccccagctgtagcatttgcatcactc
tccctatttcacatcctggtcacacctctcttcctcttatccagtgtagttcgctccaca
gtcaaagcccttgtcagtgcacagaagctaagtgagttttttgcgagtgatgagattgga
gaagaacaagaatccaagaccaccattacagctgcccccaccaaccacagcaattaccag
gccctgccactgaaggttgtgaatcgtaaacatccagtacgagaggactggaccaaatat
ggactgcagagtgaacagtacatagagacagctgcagaggaagatactgatatctgcatc
aagataaccagtggatatttcagttggactgacggggcaccaacactttctaatgtgaac
atcaagatcccatttggtcagctgactatgatagtgggtcaagttggatgtggaaaatct
tctctgttactggcggctctgggggagatgcagaggatctctggcattgtcacctggaac
agtatgccaaaactggattcagatggagatgagagtccagatgcatctcctgatgaggaa
accagaaaaagtagtgctgttgcatatgcttctcagaaaccctggcttcttaatgcctcc
ttggtagagaacatcacgtttgagatgcctcttatcaaacaacggtataagacagtaatt
gaagcatgctccctgcagccggacatcgatatcctgccacagggggaccagacagagatt
ggaggaaggggaatcattctgtcagggggtcagagacagcgcatcagtgtggcccgtgcc
ctctatcagaccaccaatgttgtttttctagatgatccattctcagcactggacatccac
ctgagtgatcatctgatgcaagagggcattctaaaactgctcagagaggagaagaggact
gtggtgctggtcacacacaaactgcaataccttcctcatgcagactggatcattgcaatg
aaagatggaatgatacaaacggaaggaacattaaaagacattcaaaattcagaacccaaa
ctgtttgagcagtggaaagctctgatgcatcgccaaggtcaagaatttgaaaaggaaact
gtggctgaaagtacaacagtgctggagaggaaaaacctgagaagagccatgtactccaga
gaggcactaaagacagaggaagaggaggaagaggagacgccggagagtgatgatgaagat
aacctttctcaggtgatgaggcagagagctaccatcccatggcattcttgtggaaaatac
ctgagctcggctggcctgctgctgctgcctctgctgctactttcccagatactaaaacat
tcaatcatggtggctattgacgtctggcttgctcactggacatctgatgttattcatgcc
aaaatcaatgctgttctacacaactgcacactggtgcaggattgtgggttcagtcactca
tcatatttgctggtgttcagtatgctgtgctgcctgggaattgtgctgtgtttggtcaca
tctgtggctgctgagtggacagggctgcgtgttgccaaagagctacaccacaacttactc
agtaaaatcatcctcgctcccatgagactctttgagacgactcctttgggaagccttctg
aaccgtttctctgctgacatcaatactattgaccagcatattcccagtactctggagtgt
ttgattcgttctacactactgtgtgtctctgcgttaggtgtgatctcatatgtcacacct
gtcttcctcattgctctcgcgcccctcgccattgtctgctacttcatccagaaatacttc
cgagtggccttcaaagatttacagcagctggaggatagtacgcagctgcctttactctct
catttttcagagacagtggaagggctcaccactatccgggctttcaggtatgagcccagg
tttcgtcagaggctactggatttgaccgatgctaataatgttgcatctctcttcctcacc
gctgcaaaccgttggctagaagtccgcatggagtatattggagcctgtattgtacttata
gctgctgtggcctccatcaccaattctctctacaaccatctgtccactggcttggtggga
ctgggactaacctctgctttgatggtgtcaaactacttgaactggatggtgcgtaatctt
gctgatatggaagtgcagttaggagcagtaaagaggattaacaacttgctaaaaacagag
ccagagaactacgaggggctgctttctgcgtctcaagtaccagatggctggccacagaaa
ggtgaaattcagatccagaacctgagtgtgaggtatgacagcactctgaagcccgtccta
aaacatgtcaatgcccacatcagaccaggccaaaaggttggcatatgtggtaggacagga
agtggcaagtcctccttctccttagccttcttcaggatggtagatgcatttgaagggcgg
ataatcatagatgacattgacatagccaagcttcctcttcagacactgcgcagtcgtttc
tcaatcattctccaagatcctattctcttcagtggaacaatccggtttaatctggaccca
gaaatgaaggctattgacagtatgctttgggaagctctggaaatcgcccagcttaaacca
gtagtacagaccctgcctggaggactcgacgccatggtgacagaaggtggggagaacttt
agccagggtcagcgtcagctgttctgcttagcacgagcgtttgtgcgcaaaagcagcatt
ctgatcatggatgaggccacggcatccatagacatggccacggagagtattctacagaag
gttgtaatgacagccttcgctgacagaacagtggtgactatagcgcatcgagttcacacc
atcctgaatgcagatctggtgattgtgatgaagaggggggagattctggaatatgataaa
cctgacgtccttctcagtacagagggcagcacctttgcctcgtttgttcaggcagataaa
tga
DBGET
integrated database retrieval system
