Trichomycterus rosablanca: 134309753
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Entry
134309753 CDS
T09921
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
trn
Trichomycterus rosablanca
Pathway
trn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134309753 (jarid2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134309753 (jarid2a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134309753 (jarid2a)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
134309753 (jarid2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
zf-C5HC2
JmjN
Phage-MuB_C
Motif
Other DBs
NCBI-GeneID:
134309753
NCBI-ProteinID:
XP_062847088
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Position
3:20673918..20800646
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AA seq
1212 aa
AA seq
DB search
MSKERPKRNIIQKKFDDNDGIPWSEERVVRRVLYLSLKEFKRAQKGKADNSTGIIKRSFA
NGHLNGSGVKPGLFSSSCKAERPRRSTQIDSEFSGEGPVRKRPRLQAQRKFAQSQPSSPN
ATPVKLLEAIPPTSSLPPSDLTKCKPKTEDFLTFLCLRGSAALPSNMKYFGSARAEEADE
EEEDDDNQLTEQVASNSLTSSQVTPRKNKAQSGVVANGHVLNGYSRATGERERSLRVRGK
EGAQGKDKRPEMTRASSTHNLRPSKPVLQQKKQHHIIHRPQRASTTNSRKARKEDLRPLS
LTKAVKYPKGHVTYTKARLLKEAKLELSAPRRHMNSQNHNTQFQHTNSGKTQPGPSRTHK
QVLLSFAARRNGLRQSKRQLEMAAVSASQAGKEVSVKKMKVPVIPKDTRSRRVAQQATQS
ARRMELRAKGAKRPKRASAGTFILKWTQRKATTRGKSGPATSAIPPTRVAPKLVTIPKPA
RSTRPNKPNKTTNPPDPGDPDDISKPPKPAETKVAQDKERGKRAAVDETIEMTEVSVFHP
SPREFHDPLSFVELVRERTEPFGLFRVVPPAGWQPECKLKEELRFVSHVQHVHKLGRRWG
PNVQQLACIKKHLRTQGINMEEPPLIGGCELDLARFFQLLNDMGGMQQVTDLKTWGRLAD
LLGIPRSAQDRLAKLQEAYCQYLLSYDSLSPAQQAQLEKDILTEKEILEKRYGPLEGQAD
TSQHAALLLPRCEPKNGLVNGALHRSGVRERLRELDPMSRTSRQTRQEKREEDGVLSELH
KCIYKGKSFSLMTFYRAARNTMNMCFSTEPDTVEVEKEYWRLVEEKECHVAVHCGRVDTK
THGSGFPVSKSEPFSKHGWNLTVLSNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRD
QNSLPYIDYLHTGADCIWYCIPATEKSKLDKVVHTLLQANGTPGLEMLEKNIMISPEVLR
RAGVKVHRTVQQSGQFMVCFPGTFVSKVCCGYSVSETVHFATAEWMKLGYEAAKDLKRKR
IEEPFSTEKLLCQIVMSESRHKDKQFLSAASPLIVELRDTEISQRRQLFNAGLRLSARYG
NQPDSQVSLERKRIQRTRLSEDTADRRCQVCQHLCYLSMVVHESDNVVFCLECALRYIQK
RRSPRGLKMMFRYTEEQLDSLVSQVCGKVSERAGEKRKAGNPSTPPTKRSPRNRNPSQVS
NSRSALKNTPRS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaaggccgaagagaaatatcattcaaaagaaattcgatgacaatgatggg
attccctggtcagaggagcgagtggtacgccgggtgctctacctctcgcttaaagagttc
aagagagcacaaaagggaaaggctgacaatagcacaggaataataaaacggtccttcgcg
aatggccatctcaatgggtcaggagtgaaaccaggacttttttccagcagctgtaaagcc
gagaggcccagacgctcgactcagatcgacagcgaattctcaggagaagggcccgtgaga
aagagaccaaggctgcaagcacagaggaaatttgcccagtctcagccgagctcacccaac
gccactccagtaaaacttttggaggccattccacccacttctagccttcctcccagcgat
ctcaccaagtgcaaacccaaaacagaggactttctgacctttctgtgtctaagaggttct
gctgcgttgcccagcaacatgaagtactttgggagtgcacgggctgaagaagcagatgag
gaggaagaagatgacgacaaccagctaaccgaacaggttgcctctaattcccttacttcc
agtcaggtcactccacgcaagaacaaagcccagagcggagttgtcgcaaacggacacgta
ctaaatgggtattcccgggccacaggtgaacgagaaaggagtctaagggtcaggggaaaa
gaaggcgcccaagggaaggacaaacgtcctgaaatgaccagggcttcaagcacacataat
ctacgacccagcaagcctgtactgcaacagaaaaaacagcaccatataattcaccggccc
cagcgagcctctacaaccaacagccggaaagcgcggaaggaagatttgcgaccgctctct
ttgaccaaagctgtgaaatacccgaagggccatgtgacctacaccaaagccagactgcta
aaagaggccaagctcgaactgagtgcacccaggcggcacatgaactcacaaaaccacaac
acacaatttcagcacactaactcaggaaaaacccaacctggccccagcaggacacacaaa
caggtgctattgtcatttgcagcgagacgaaatggactgcgacagtcgaagaggcagctg
gaaatggcggcggttagtgctagccaagcagggaaagaggtgtcggtcaaaaaaatgaaa
gtgccggtcattccaaaggacacgcggagcaggagagtagctcagcaggcaacacagtct
gccagaagaatggaactgcgagcaaagggtgctaagagacctaaacgggcttctgctggg
acgttcattctgaaatggacacaacgtaaagccacaactcggggcaagagcggccccgct
acctcagcaattcctcccaccagggttgccccaaaactagtcacaattcctaaaccagcc
agatcaaccagacccaacaagcccaacaaaacaaccaaccctcctgaccctggtgaccct
gatgacatatccaaacctcctaaaccagcagagactaaagtcgctcaggacaaggagaga
ggcaaacgtgctgctgtagatgagacaatagagatgacagaggtctccgtgtttcacccg
agcccacgtgagttccatgacccactgtcatttgtagaactggtacgtgagcgcaccgag
ccgttcggcctcttccgagtggttccacctgctggttggcagcccgagtgcaagttgaaa
gaggagttgcgctttgtctcacatgtacagcatgtgcacaagctaggccgccgttggggt
cccaatgtccagcagcttgcctgcatcaagaaacatctgcgtactcaaggcattaacatg
gaggagccaccactaatagggggctgtgaactggatctagcccgcttcttccagctctta
aacgacatgggcggcatgcagcaggtgacggaccttaagacgtggggccgtttggccgac
ctgctgggcatcccacgctctgcccaggatcgactggccaagttgcaggaggcctattgc
cagtacctgctctcctacgactcgctgtccccagcgcagcaggcacagctagaaaaagac
atcctgaccgagaaggagatccttgagaagaggtacgggcccctggagggccaggcggac
acgtcccagcatgcagctctgcttttgccacgttgcgagcccaaaaatggcctggtaaat
ggagctctgcatcggagtggtgtgcgtgagcgcctccgagagctcgaccccatgtccagg
actagccgccagacacggcaggagaaaagagaagaagatggcgtgctgagtgagctgcac
aagtgcatatacaagggaaaatcgttctctttaatgacgttctaccgggcagccaggaac
actatgaatatgtgctttagcactgagccagatacggttgaagtagagaaagagtactgg
agactagtggaagaaaaagaatgccatgttgcagtgcactgtgggcgagtggacactaag
actcatgggagtggatttcctgtaagcaagtccgagccattttcaaagcacggatggaat
ctcactgtcctttccaataactcaggatccatcttgcgtcatcttggtgctgtgccagga
gtgaccatcccctggctgaacattggcatggtgttttctacctcatgttggtcaagggac
cagaatagccttccatatatagattatctacacactggtgctgattgcatttggtactgt
attcctgccactgagaagtcaaaacttgacaaagtggtacacacactactgcaagccaat
ggaaccccaggactcgagatgctggagaagaatatcatgatctctccagaggtgctacgt
cgagcgggggtaaaagtgcaccggacagtgcagcagagtggccagttcatggtgtgtttc
cctggtactttcgtgtccaaggtgtgttgtggctacagtgtgtctgagacagtgcatttt
gccacagctgagtggatgaaactgggctacgaggcagcaaaggacctgaagagaaagcgc
atagaggagccgttctccacagagaaacttctctgtcagatagtcatgtctgaatccagg
cacaaagacaaacagtttttgagtgcagcttcccctctcattgtggagctcagggacaca
gagattagccagcggcggcagctttttaatgccggtctcaggctatctgcacgttatgga
aaccagcctgacagccaggtgtccttagagaggaagagaatacagcgtaccaggctgagc
gaagacaccgccgaccgacgctgccaggtgtgccagcacctctgctacctctctatggtg
gttcatgagagtgataacgtggtgttctgtctggagtgcgctcttcgctatatccagaag
cgcaggtcccctcgagggctaaaaatgatgtttcgttacactgaggagcagctggacagt
ttggtcagtcaggtgtgtggaaaagtgtcagaaagggctggtgagaagcggaaagcgggt
aaccccagtactccaccaacaaaacgaagtcctcgaaacaggaacccaagccaggtctcc
aactcacgctcggccttgaaaaacactccccgctcctga
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