Trichomycterus rosablanca: 134309821
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Entry
134309821 CDS
T09921
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134309821 (rreb1a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
134309821 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-H2C2_5
zf-C2H2_6
zf-met
zf-C2H2_11
zf-C2H2_8
zf-C2H2_REST
Actin_micro
Motif
Other DBs
NCBI-GeneID:
134309821
NCBI-ProteinID:
XP_062847235
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All DBs
Position
3:31699293..31769515
Genome browser
AA seq
1684 aa
AA seq
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MSRRKQSNPNKVKLMDSLMEDKKTKEEVSITKGAQKSEEMEKHKESQRESEDRLQDGQIR
EDDEMEGSDGADLSSINSMMSNVMKAAQLNGEVEVPIKTPNKTSSKSPSATRYARKSQEA
NDDASPLVCPLCEKICQNQHQLTMHIRQHNTDTGGTDHSCSICGKSLSSASSLDRHMLVH
SGERPYKCRVCGQTFTTNGNMHRHMKIHNKDPAMSVPTSPPSPIKRRRSSTAISKRKPSQ
NDDGERTDEPASKKVAEDTGGDEPIQSKGQEETLPCPICFKNLSCKYELETHMETHPESA
LRCELCCISFRTHRGLVRHNVAIHKQLPTDPNGRPFIQNNPSIALGFDDLAFIDFSCHKF
PHIAQLWCETNLRRCTSNLHRFVCETCDKAFPLRLALDLHKSTHETSKAAQESVSSKSST
VDSAVSHKSSFMDSLGLQHISKIKPVPSESEALQAELDSIRTIHVDPSSVPKETGIIGGF
GLSLVDPSSLRGLPQHEALKLLSLQPFQTGFLVQPDGGMVVKPVSGETGMELADIKQILK
VASAAPNQISLPPLSKAPCSAMQTGFKQMPPLKQKPLVAPRTNMTTSTLPPLLSTQQASL
GCISPSLPPPAGHSLNAAKKLSPSSSSSSSSCNQASIEKMQMEAECMGDAHTPMETDEQQ
TKQAEDNTNESPTKKGVGRKGSYSCRFCDQVFAYSGVLQAHVRYHLGILPHQCNICDYVA
PDKATLIRHLRTHSGERPYVCRVCHYPFTVKANCERHLRKKHMKNNRKDIEKNIKYVTSS
TSTPDALEQVGSGETTCRLCNEDLKTSRALQNHMHNHNGYQQKPFECKRCGAAFLAKRNC
IHHLLKQHPEVKEQEIEEQIATLLSAPSQTSPNHSPLSGISPSALIHPIKVEDLSFYGVD
QDQPLDFSNKKRGSTNSGSIAVSPGIKVEHVTYGDSMEPIDLSIPKNPEKKIKSDMQAVL
PQEVKKEQPSFKIMDHQLSQGMFNDRPIDEKSQQLGCYQLPIALTTLKAANATSRVLRLK
PLLPKPTSAGVKELPPLASIAQIISSVVGAPDLLKRENSNSCPSDSDAASKPEVLDLPTK
DFPKEGSKRKSNKQSPAKTAKVKLALNTTDTSIDLESSGEFASVEKMLATIGANKFSTYL
QTNTIEQARKEGEQSCQSDKKEAKDEKPAKQNSQPQQSKGKKNAYSNSVQKMICPFCPRV
FPWASSLQRHMLTHTGQKPYPCPKCEALFSTKSNCERHLLRKHGVTSRILRHNGGLPKTK
DSEDGSPDSAESMSETEFPNYEAMELINYESDKQPVSDAEKPSPAKPTEAAAVKLVLHQE
VHEDHDINEYLDTRSSDYEDDSNSNKSLDLNFATKLTDFKFSENDQPKALKFSDDEPPKS
LLSGDSSSHERTTQQEDSKLTCKSCNKSFRYAATLARHEKVHQQESAADTPVADSSVEDC
EARTEEIDEEVEKFEQKGAAESEGAGSVADSGSEEEKEEKDERSDEEEGAVEPKSGEGEP
EISRGKSDRRKKLCDVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRHQR
IHQKPRGADGYLGRAGEEEGFSGRSASEEESAATSTNPPSENESEVVKKENKSTSKVCKK
RLDKDARVTEKPETAPATATPKEPPAEQHDEQPEGYLHGLLEIHTKPNNELGLPKGEPPL
LGVE
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgaaagcagtccaacccgaacaaagtgaagctaatggatagtttaatggag
gacaaaaagacaaaagaagaggtcagcatcactaagggggctcagaaatcagaggagatg
gagaaacacaaagagagtcagagagagtcggaagacagactacaggacggtcagatccga
gaagacgacgagatggagggatcagacggagctgatctgtcatctattaactcaatgatg
agcaatgtgatgaaagcagctcagctaaatggagaagtggaggttcctatcaaaactccc
aacaagacttccagtaagagtcccagcgccacccgctatgccagaaagagccaggaagct
aatgacgatgcatcacctcttgtctgcccactgtgtgaaaagatctgtcagaaccagcac
cagcttaccatgcatattcgccagcataacacagatacaggaggtacagatcactcctgc
agtatttgtggaaagtccctgagctctgccagctctctggaccgacacatgttggtacac
agcggtgaaagaccctacaaatgcagggtgtgcggccagaccttcaccaccaatggcaac
atgcacagacacatgaagatccacaataaagatcccgccatgtccgtcccaaccagccct
ccatcacccattaaacggagacgctcatctactgctatttccaaaaggaaacccagtcaa
aatgatgacggagagcgaactgatgagcctgccagcaaaaaggttgctgaggatactgga
ggggatgagccaatccagagcaaggggcaggaggagacgctgccatgccccatctgcttc
aagaatctcagctgtaaatatgaactggaaactcatatggaaacccaccctgagtctgca
ctaaggtgtgagctctgctgtatctcatttcggactcacagaggattggtccgtcacaat
gtggctatccataagcagctgcccactgaccctaacggacgaccattcattcagaacaac
ccctctatagctctgggatttgatgatctggccttcattgacttctcctgccacaaattc
ccacacattgcccagctttggtgtgaaaccaatctacgacgctgcaccagcaaccttcat
cgatttgtgtgtgagacctgtgacaaagcattccctttgcgtttggctttagacctgcac
aagtccacacatgaaacttccaaagccgctcaggagtctgtttcttccaagtcatctact
gtagactctgcagtctctcacaaaagtagctttatggattctctgggtttgcagcatatc
tctaagatcaaacccgtgccctctgagagcgaagccttgcaggcagagcttgatagtatt
cgaaccatccacgtggatccttcatcagtccccaaggagactggcatcattggcgggttt
ggtttgtctttggtggatccatcttctctccggggtctcccccagcacgaggcccttaaa
cttctgtctttacagccctttcagactggttttcttgtccagcctgatggtggcatggta
gtaaagccagtcagtggtgagacgggaatggaactggctgacataaagcagatcctcaaa
gtggcttctgccgcgccgaatcagatcagccttccacccttgtccaaggcgccgtgcagt
gcaatgcagacaggcttcaagcagatgcccccactcaaacaaaaacccctggtggctccc
aggaccaacatgacaacttcaacccttcctcctcttctaagcacccagcaggcatcacta
ggttgcataagccccagcctaccacctcctgctggtcattccctaaacgctgccaagaaa
ctgtctccatcctcatcttcatcatcatcttcatgcaaccaggcatctattgaaaaaatg
caaatggaagcagagtgcatgggtgatgcccacacacctatggagacagacgagcaacaa
accaagcaggccgaagacaacacaaatgagtcacctacaaaaaagggagtaggtcgcaaa
ggttcttactcctgtcgtttttgtgaccaagtcttcgcatattctggggtacttcaggca
cacgtgcgttatcatctcggcatcttgccccatcagtgcaatatctgtgactatgttgcc
ccagacaaagccacgctgatccgtcatctacgcacccacagtggggagcggccttacgtc
tgcagagtctgtcattatcccttcaccgttaaagccaactgtgagcgccaccttcgcaag
aagcacatgaagaacaatcgtaaggacattgagaaaaatataaagtatgttacctcatcc
acttccacacccgacgctttagaacaggtcggctcaggtgagactacctgccgtttatgc
aatgaagacctgaagacctcacgagccctacagaaccacatgcataaccataatggctac
cagcaaaagccatttgagtgcaaacgctgtggagcagccttcctggctaaacgaaattgt
atccaccacctactgaaacagcaccctgaggttaaagagcaggaaatcgaagagcaaata
gccaccctcctttctgctccttctcagactagtcctaaccactctccactcagtggcatt
tcaccaagtgctttgattcatccaattaaagtggaggacctgagcttttatggtgtagat
caggaccaaccattagacttttcaaacaaaaaacgaggaagtactaattctggaagcatc
gctgtttctcctgggatcaaggtggaacatgtcacttatggagactctatggagcctatt
gatctttctattcccaagaatccagaaaagaagattaagtccgatatgcaagcagtgttg
cctcaagaagtgaagaaggagcaaccatcctttaaaataatggatcaccaactttcccag
ggcatgttcaatgacagacctattgatgagaagtcccaacagttagggtgctaccagctc
cccatagccttaaccactcttaaagctgccaatgcaacaagtcgggtcttgcgtctaaag
cccctgctacccaaacctacttctgctggtgtgaaggagctgccaccattggcctctatc
gcccagattatctcctctgtcgtcggtgcccctgacctcctgaaacgagagaactccaac
agctgtccgtctgattctgatgcagcatctaagccagaggtcctagacctcccaaccaag
gactttcccaaagagggatccaaaaggaaaagcaataaacagtcacctgcgaagacagct
aaggtaaagcttgcactgaatacaacagacaccagtattgatctcgagtccagtggggaa
tttgccagtgtagaaaagatgcttgccaccatcggtgccaacaagtttagcacctacttg
caaaccaacacaatcgagcaagcgagaaaagaaggtgaacaatcatgccagagcgacaag
aaagaggctaaagatgaaaaaccagccaaacagaactcacagccccagcagtccaaaggg
aaaaaaaatgcatactcaaactcagtgcaaaagatgatctgcccattctgtccccgagtc
tttccatgggccagctcactccagcgccatatgctgacgcacacaggtcagaagccgtat
ccctgtcccaaatgtgaagccctgttctcaaccaagtctaactgtgagcgacatcttttg
cgtaagcatggcgtaaccagtagaatccttcgtcacaatggtggcttacccaaaaccaag
gactcagaggacggctcaccagatagtgcagagagcatgtctgagaccgagtttcctaac
tacgaggcaatggaactaattaattatgagtccgacaagcagcccgtctccgatgctgag
aaaccctcccctgccaagccaacagaggcagctgcagtgaagcttgttctccaccaggag
gtgcacgaggaccatgacattaatgagtacctggacacgagaagctcagactatgaagac
gatagcaacagcaataaaagcttggatctgaactttgccaccaaactgactgacttcaag
ttctctgagaatgaccagccaaaagcactcaagttctctgatgatgaacctccgaaatcc
ttgttatccggggatagcagctcacacgaaagaaccactcaacaggaagattccaagctg
acctgcaagagctgcaacaagagctttcgctatgctgcaaccctggcacgacacgagaaa
gttcaccagcaggaaagtgcagcggatacacctgttgcagactccagtgtagaagactgt
gaggcaagaaccgaggaaatagatgaggaagttgagaaatttgaacaaaagggggcggca
gaaagtgaaggagccggcagcgtagcggacagcggctctgaggaggagaaggaggagaag
gacgagaggagtgatgaagaggaaggcgcagttgaaccaaagagtggtgagggggagcct
gaaatatccagaggcaaaagtgacaggaggaagaagctctgtgatgtgtgtaacaaacgc
ttctggagtttacaggatctcaccagacatatgcgctctcacactggtgaacgaccatac
aaatgtcagacctgcgagcgcacgttcaccctgaagcacagcctggtccgacaccagcgc
atacaccagaaacctcgcggtgcagacggatatttgggtagagctggagaggaggaggga
ttcagcggccgctcggccagcgaggaggaatccgccgccaccagcaccaaccctccatcc
gagaacgagagcgaagtcgtaaagaaggagaacaagtctacgtcaaaagtatgcaaaaag
agacttgataaggatgcacgtgtgaccgagaagccagaaacggcaccggctacagcgaca
cccaaagagcctccagcggaacagcatgacgagcaaccggagggctatctccacggcctg
ctggagatccacaccaagcctaacaacgagctcggtcttcccaaaggcgagccccctctg
ctgggcgtcgagtga
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integrated database retrieval system
