Trichomycterus rosablanca: 134309936
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Entry
134309936 CDS
T09921
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134309936 (ascc3)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134309936 (ascc3)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
134309936 (ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
134309936
NCBI-ProteinID:
XP_062847470
LinkDB
All DBs
Position
3:48332956..48616377
Genome browser
AA seq
2207 aa
AA seq
DB search
MVPPRLTGALRSFSSVSRQEDVTTEPYDLKAKRLNRQKTFASEGLTWQKVVQFFTRHQKK
REEQILSQELKGVLQAAKQIVGTEYGQEAIESAAVFLFKTFHNKDQVGHEETRAIKQMFG
PFPASAAEASCAAVGRLVAQLGESQVEAFIQTQTSSKPLDHGTSFGRNIAFSFDTYVLDT
PDTLPLDDENSDGCGLDFTSFLSNHVAGQSTGSETAGASSAGAVSQSSSADSSVLRREVD
KYLSGGNMGSSSAEELCTSLFEMLASTRSDDELQNELFEFLGVEGFEMISTLLQKRSDIV
DSLLSAPPDLRFSRPPDGKVKNESAKPTYGCQVTIQSEQEKQMVKLFRREEKRERKKERR
GDDGESSEMSFHFDPKELRLQREQALLTSRQSPVLGRHREYERIHYPHVYDAFAEATTSS
AFIGGCKMLLPEGIRKENIKMYEEVEIPPSEPMPIGFQEKPIYISELDEVGQLVFKGMKR
LNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIVY
VAPMKALAAEMTNYFSKRLEPLGISVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKS
VGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYL
DVASFLHVNPYIGLFFFDSRFRPVPLGQTFIGVKTTNKIQQLHDMEEVCYEKVLKQIKAG
HQVMVFVHARNATVRTAMSLIEMAKNRGESSYFQSDQGSDYGHCEKQVQRSRNKQMREMF
PDGFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKR
GTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFQASLA
DNLNAEVALGTVTNVAEAVKWLSYTYLYVRMRANPLVYGISHKACQMDPGLELYRQELVV
EAGRKLDKARMIRFEERTGYFGSTDLGRTASHFYIKYNTIETFNELFNAQKTEADILSIV
SKAEEFEQVKVRDEEMEELEQLLTNFCELPASGGVENGYGKINILLQTYISRGEVDGFSL
ISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFATLPG
TVLARLEDRNLSVDKLKEMRKDEIGHMLHHVNIGLKVKQCAHQIPAILMEAAIQPITRTV
LRVRLSVTPDFKWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSGEPQQVVF
TIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQQLILPERHPPHTELLDLQPLSVTALGN
REYESLYKFTHYNPIQTQIFHTLYHTDSNVLLGAPTGSGKTIAAEMAMFRVFNKYPTSKV
VYIAPLKALVRERIEDWKIRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVS
RSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSRSVRVVGLSTALAN
ARDLADWLGIGQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHSPA
KPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIATVRDSNLKLTLAFG
IGMHHAGLHERDRKTAEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTHRY
VDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHL
NAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYNLDDTNHDTINKFLSNLVEKSLRDL
ESSYCMKIQEDGSTIEPLTYGRIASYYYLKHQSVCMFKERLKSELFVQELLSILSDAEEY
AELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTNLLLQAHFSRAQLPCSDYGTDTKT
VLDNAIRICQAMLDVVANEGWLVSALSICNLVQMIVQARWLNDSSLLIVPHIDQQNLYLF
RRWSPKGGKGGARGYQGPIESIPELMAVCDGREEIFRAMVKEELQPHQIAQAWAFLSHMP
VLEVSMSVKGWWEGCKEQTERALPTAVSNIREQKSWLQVHADQEYVLQVSLQRLNTGQQR
RKQDSKAQAPHFSKPKDEGWFLVLGEVDKRELLAIKRVGYVRNRNVTSVAFYTPVQTGKC
IYTLYVMSDSYLGLDQQYDIHLNVIPASITTQVNTEVADHLGGMNLK
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggttcctcctcggcttaccggggccctgcgctctttttcctcggttagcaggcaggag
gacgtcacaaccgagccgtatgatttaaaggccaagcgactgaacaggcagaaaacgttt
gccagcgagggcctgacatggcagaaagttgtccagttcttcacacgacaccagaaaaag
agggaggaacagatcctctctcaggagctgaaaggtgttctgcaagcggccaagcaaata
gtgggtacagagtacggacaggaggctattgaaagtgccgccgtcttcttgttcaaaacg
ttccacaacaaagaccaggtcggccatgaagaaacccgagccatcaagcagatgttcggc
cctttcccggcgtcagcggctgaagcctcctgcgctgctgtgggccgtctggtggcccag
ctcggagaatcccaggtagaggcgttcatccagacccagacctccagtaaacctctggat
catgggacgtcctttgggcggaacatcgccttctctttcgacacgtacgttctagacacc
ccggacactcttcccttggacgacgagaacagcgatgggtgcggcctggacttcaccagc
ttcctgagcaaccacgttgccggacagagcactgggtcagagacggctggagctagctcc
gctggcgctgtgagccaaagcagcagtgcggacagctccgttctcaggagagaggtggac
aaatacctgtccggaggcaacatgggctcgtccagcgctgaggaactctgtacctccctg
tttgagatgctggcgtctaccaggagtgatgacgaactgcaaaacgagctgtttgaattt
cttggtgttgaaggatttgagatgatttccacccttcttcagaaaaggtctgatattgtg
gactcgcttctgtctgccccgcccgacctcagattcagtcgtccaccggatgggaaggtt
aaaaatgagtctgcgaaacccacatacggctgtcaggtgaccattcaatcggagcaggag
aagcagatggtgaagctgttccggcgggaggagaagagagagaggaagaaggagagacga
ggtgatgatggggaatcctcggaaatgtctttccattttgatcccaaagagctgcgactg
cagagggagcaggctttgctgacttcccgacagtccccggtgttgggccgtcaccgagaa
tacgagcgcattcactaccctcatgtctacgatgcgtttgctgaggctacaacgtcctcc
gcgtttattggagggtgcaagatgctgctgcccgagggcatccggaaggagaatatcaag
atgtacgaggaggttgaaattccaccctccgagcccatgcccatcggtttccaagaaaag
cccatctacatctctgagctggacgaggttgggcagctggtgtttaaaggtatgaagcgg
ctgaacaggatccagtccatcgtctttgagacggcgtacaacaccaatgagaacatgctt
atctgtgctcccactggagccggaaagaccaatatcgcaatgctcacggtcctacacgag
atccgccagcacctacagcctggaggcgtcatccgcaaggaccagttcaagattgtatat
gtagctccaatgaaagctctggctgctgagatgactaattacttcagtaaacgtctggaa
ccattgggcatctctgtcaaagagctgaccggagacatgcagctgaccaagggggaaatc
ctacgcactcagatgttggtgacgactccggagaagtgggacgtagtgacgaggaaaagc
gttggcgacgtggctttgtcgcaaatcgttcgcttgctcatcttagacgaggtccatctg
ctacatgaggacagaggtcctgtcttggagagcctggtagccaggactctgcgacaggtg
gaatcaacacagagtatgattcgcattctgggcctgtctgccactttacctaattatctg
gacgtggcttcattcctgcacgtcaacccctacatcggcctgttcttcttcgacagccgc
ttccgccctgttccactcggacaaacctttattggtgttaagaccacaaataagatccag
cagcttcatgacatggaggaggtttgttacgagaaagtactgaagcagattaaagctggg
catcaggtgatggtgtttgtgcacgcccgtaacgccacggtacgcaccgccatgtcgctg
attgagatggccaaaaaccgtggtgaatcatcttacttccagtcggatcagggctcagat
tacggtcactgcgagaagcaggttcagcgctcccggaataagcagatgagggagatgttt
cctgatggatttgggatccaccatgctgggatgctaaggcaggaccgaacactcatggaa
aacatgttctccagaggttacctgaaggttttggtgtgcacagccactctggcctggggt
gttaacctgcccgctcatgcggtcatcattaagggaacacaaatttatgatgccaagcgg
ggtactctggtggacctgggcatcctggatgtgatgcagatcttcgggcgcgctggccgg
cctcagtttgataagtacggagagggcaccatcatcaccacccatgacaagctgagtcac
tacctgactctccttactcagcagaaccccatcgagagtcagttccaggccagcctggct
gataacctgaatgcagaggtggctcttggaaccgttaccaacgttgcagaagctgttaaa
tggctgagctacacctacctgtacgtccgaatgagagctaatcctctggtttacggcatc
agtcacaaggcctgtcagatggatccagggctggagctttacaggcaggagttggtggta
gaggccgggaggaaactggataaagcccgaatgatccgttttgaggagaggaccggctat
tttggctccacagatcttggcagaacagccagccacttctacatcaagtataacacaatt
gagacttttaatgagctcttcaatgcccagaaaacagaagctgacattttgagtatagtc
tctaaagcggaggaatttgagcaggttaaggtccgtgatgaggagatggaggaactggag
cagttattgactaacttctgcgagttgccagcatctggaggagtggagaacggctacggc
aagatcaacatcctgctacagacctacatcagccgcggtgaggtggacggcttctccctc
atctctgatctgtcatatgtagcccagaacgctgcccgtatcgtgagggctctttttgag
atcgctctgaggaagcgctggccagccatgacctaccggctgctcaacctttgcaaggta
atcgataagcgcctgtggggctgggcacaccccctgcgtcagtttgctacactgccgggc
accgtgctcgctagactggaggacagaaacctcagcgtggacaaactcaaagaaatgcgc
aaggatgagatcggtcacatgttgcaccacgtaaacatcggactgaaggtaaagcagtgc
gcccaccagattcctgccatactcatggaagctgccatccagcccatcacgaggaccgtc
ctgcgcgtgcgcctctccgtgacccctgactttaagtggaacgaccaggtgcatggctca
gtcggggaaccatggtggctgtgggttgaagaccccatcaacgaccacatttaccactca
gagtattttctcctgcaaaagaaacaggtggtgagtggggagcctcagcaggtggtgttc
accatccccatctttgagcccatgccttctcagtactacatccgtgccgtttctgaccgc
tggctgggctctgaggccgtatgcatcatcaacttccagcagctcattttacctgagaga
caccccccacacacagaactgctggacctgcagccgctatcagtaacggcactgggaaat
agggaatatgagagtctgtacaagttcacccattacaaccccattcagacccagatcttt
cacacactctaccacactgatagcaacgtgctgctcggggcgccgaccggctcgggaaaa
accatcgctgcagagatggctatgttcagagtctttaacaagtacccaacctccaaggtg
gtgtacattgctcctctgaaagcgctggtcagagagaggattgaagactggaaaatcaga
attgaggaaaagctcggaaggaaggtggtggagctgacgggtgatgtgactccagacatg
cgggccatagcccaggccgatctgatcgtcaccactccggagaagtgggacggagtcagt
cgcagctggcagaaccgcagctacgttcagaaagtcgccatcctcatcatcgatgaaata
catctgctgggggaggacagagggcctgttctggaggtcattgtatcccggaccaacttt
atctcatcccacacttccaggtctgtgcgagtggttggactctccacagcactcgccaat
gcacgcgacctggcagactggctgggcatcggacagatgggattgtttaatttccgaccc
tcagttcggccggtcccattggaggtgcacatccaaggttttcctgggcagcattactgt
cctcgtatggccagcatgaataaaccagttttccaagctatccgtagccattcccctgcc
aagcctgtcctgatattcgtatcatcacggcggcagacacgtctcaccgcactcgacctg
atcgccttcctggccacagaagacgacccaaaacagtggttgcaccaggatgagagagag
atgacagacatcatcgctacagtgagagattcaaacctgaagctgacgctggcctttggg
atcggtatgcatcatgctgggctgcatgagagagacagaaagaccgcggaagagctgttt
gttaactgcaagattcaggtcctgatcgccactagcactctcgcctggggagtaaatttc
ccagcccatctggtgattgtaaagggtacagagtactacgatgggaagactcaccgctat
gtggattacccaatcacagatgttctgcagatgatggggagggcagggagacctcagttc
gatgaccagggcaaagctgtcattctagtacatgacatcaagaaagacttctacaaaaag
tttctctatgagccgttccccgtcgagtccagtttgcttggtgtgctgtctgatcacttg
aacgcagaaatagctgcagggaccattacttccaagcaggatgcgatggattacatcacc
tggacgtacttcttccgtagactggtcatgaatcccagctactacaatttggacgacaca
aatcatgacacaatcaacaagttcctgtccaatctggtggaaaaaagtctcagagatctg
gagagttcttactgtatgaaaatacaagaggatgggagcaccatcgagcctcttacatac
ggccgaatcgcatcctattattacctgaagcaccagtctgtttgcatgttcaaggagagg
cttaaatcagaactgttcgtccaggagctgctgtctatcctgtcggatgcggaggagtac
gctgaactaccggtgcgccacaacgaggatcagctgaacagcgaactggcccagcggctt
ccactgcaagtcaacccacattcgtacgacagcgcccacaccaaaactaacctgctcctg
caggcccacttcagccgagcccagctgccctgcagcgattacggcacggacaccaagacc
gtcctggacaacgccatccgtatctgccaggccatgttggatgtggtagcaaacgaaggc
tggctagtatccgctctgagcatctgtaatctggtgcagatgattgttcaggccaggtgg
ctcaatgactcctccctgctcatcgtgccacatatcgaccagcagaacctctacctcttc
aggagatggagccccaaaggtgggaagggcggagccaggggttatcaaggcccaatcgaa
agcattcctgagctaatggctgtctgtgatggaagagaggagatcttcagagctatggtg
aaggaggagcttcagccccatcagattgctcaggcgtgggcttttctgagtcacatgccg
gtgctggaggtcagtatgagtgtgaagggctggtgggaaggctgtaaggagcagactgag
cgcgctctacctactgctgtgtccaacatcagggagcagaaaagttggttgcaagtacat
gctgaccaggagtatgtactacaggtgtccctacagaggctcaacacaggccagcaaaga
aggaagcaggatagcaaggctcaggctccacatttttccaaacccaaagatgagggctgg
ttcctggtgctgggtgaggtggacaagagggagcttctggccatcaaacgagtgggatat
gtgcgcaaccgcaacgtgacttcagtggccttctatacacctgtgcagactggcaagtgt
atctacacactttacgtgatgagcgacagttacctaggcttggatcagcagtacgacatc
cacctgaatgtgattccagccagcatcactacacaggtcaacacagaggttgcagatcat
ctgggtggaatgaacttgaagtga
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integrated database retrieval system
