Trichomycterus rosablanca: 134309953
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Entry
134309953 CDS
T09921
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134309953 (ptbp2a)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134309953 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
134309953
NCBI-ProteinID:
XP_062847500
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All DBs
Position
3:50693837..50735841
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AA seq
511 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSSSMYSGTTLGMSSISDSTSNGSDSKKLRVEERVGDAPPSR
VLHIRKLPNEVSEAEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HVRNVPVFIQYSNHKELKTETNQSGGTTTSGSGDGTLATPSSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQYNDAASAQQAKVALDGQNIYNACCTLRIDYSK
LVNLNVKYNNDKSRDYTRPELPAGDGQPTVDPSVAAAFGKDTNSLLGKIPGALSPLSAAA
AAAAVAGRVALSGHSGNGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALI
QMADLNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFK
KPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFTNSGGTVKAFKFFQDRKMALIQLST
VEESIQCLIDLHNYNMGNNHHLRVSFSKSTI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcggttggtgtaaagagggggtctgatgagctgttgtcc
agtagtatgtacagcggtaccactttggggatgagcagtatcagcgacagcacgtcgaat
ggaagtgacagcaagaagttgagagtagaagagagggtgggagacgctccgccatcacgt
gtcctgcacatcagaaaactacccaatgaagtctcggaggcagaaatcatcgcattaggg
ctgccgtttggaaaggtcactaatatcctcacactgaagggcaaaaaccaggcattcctc
gagctcagcacagaggaagcagccatcaccatggtgaactactactccgcggttacaccg
cacgtacgaaacgtcccggtgttcatccagtattcaaatcacaaagaactcaagaccgaa
acaaaccagtcgggtggaacgaccacgtccggctccggtgatggaacgctcgcgacgccc
agcagtccagtcctgaggattatcatcgacaacatgttctaccccgtcactctagatgtg
ttgcagcagatcttttcaaagtttggcacagttatgaaaatcatcacgttcactaagaac
aatcagtttcaggccctgctgcagtacaatgacgcggcgagcgcccagcaagccaaagtg
gcgctggacggtcagaacatatacaacgcttgctgcacgctgaggatagactactccaaa
ctcgtcaacctgaatgtaaagtacaacaacgataagagcagggactataccagaccagag
ctgcctgcgggcgatggccagcctaccgtggacccatcggtggcagcggcttttggcaag
gatacgaactccctgctcggtaagatcccaggtgctttaagtcctctgagtgcagcggcc
gcggcggcagcagtggcgggtcgagtggcgctgtcgggacacagcggtaacggcgtcctc
ctggtcagcaatctaaacgaagagatggttacgccccaaagtctgtttaccctcttcggg
gtgtacggtgacgtgcagcgcgtgaagatcctctataataaaaaagacagcgcgttaata
cagatggccgatttgaatcaagcccaacttgcaatgagccatctgaatggtcagaagatg
tattcgaagatcatccgtgtgaccatgtccaagcatcagacggttcagttgcccagggat
ggcttggatgatcaaggtctcaccaaggatttcaccaactcccctctccatcgtttcaaa
aagcccggctccaagaacttccagaacatcttccctccctcagccacgctgcatttgtcc
aacatcccgcaagacatcacagaagaagatctcagagttttgttcaccaactccggagga
accgtcaaagccttcaagtttttccaggatcgtaaaatggctctcatccagctgtcaaca
gtcgaagagtccattcagtgcttgatcgacctccacaactacaacatgggcaacaaccac
cacctgagggtctccttctccaaatcgaccatttaa
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