Trichomycterus rosablanca: 134309960
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Entry
134309960 CDS
T09921
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
trn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134309960 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134309960 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134309960 (amfra)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
134309960 (amfra)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134309960 (amfra)
Multi subunit type E3
ERAD complex
134309960 (amfra)
LMBR1L-GP78-UBAC2 complex
134309960 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
134309960
NCBI-ProteinID:
XP_062847520
LinkDB
All DBs
Position
1:complement(32475457..32488537)
Genome browser
AA seq
645 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSAVLLAGSLLSAYTAVTESEGAPSGSSDQASEETPSTSID
DVKVVQADNLGNVAASMLFYLISDSLFVWVLVNTACCVLMLIAKVIQCIVFGPLRVSEKQ
HLKDKFWNFIFYKFIFIFGVLNVQTVEEVVLWCLWFAVLIFLHLMVQLSKDRFEYLSFSP
TTPMSSHVRVLSLLVFMLVCCGGLAALCGLVDHLHGMHTIAFMAAECLLVTVRTGHVIIR
YSIHLWDLNYEGTWESKGTYVYYTDFVMDLALLCLDLMHHIHMLLFGNIWLSMASLVIFM
QLRYLFHEVQRRIRRHKNYLRVIDNMESRFSVATPEELVANNDDCAICWDSMTSARKLPC
GHLFHNSCLRSWLEQDTSCPTCRMSLNINEGGREREEGQRAPIDDNMAPGPGNDARPQFN
QHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAHANNSQLNAMAHQIQEMFPQVPYHLV
LQDLQLTRSVEVTTDNILEGRIQVPFPAQPLERAPIQANLVPEESAGASGGPELPNTETE
DLEMRGSRFSKSADERQRMLHQRKEELLQRARRRYLNKNNGASSFTSVAPEKDEDDYPED
NDDDDDNAPSSLKVEGSNSDLVTLRRRVLADAAERRLQRQPDSSI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagaggttcccttggcccagtttgcagacttacactgcactg
agcgctgtgctgctggcaggatcgcttctcagtgcctatacagctgtgacagaaagtgaa
ggagcgccatcagggtcttcagatcaggcttcagaagaaactcccagcacttccatagac
gatgttaaagtggtgcaagctgacaaccttggaaatgtggccgccagtatgttgttctat
ctgatctcagacagcctgtttgtctgggttctggtcaatacagcatgttgtgtcctgatg
ctgattgccaaggtcatccagtgcatagtttttggtccactgagggtcagcgagaagcaa
catttaaaggacaagttttggaacttcatcttctataagttcatatttatattcggagtg
ctgaatgtgcagacagtggaggaggtggtgctgtggtgtttgtggtttgctgtcctcatc
tttctccacctcatggtgcagctctctaaagatcgatttgaatatctgtcattctcccca
accacccccatgagcagccatgtgcgagttctgtccttgctagtgttcatgctggtgtgc
tgtggaggtctggctgcactctgtggtctggttgatcatctccatgggatgcatactatt
gcatttatggcagctgagtgtttacttgtcacagtgcgcactgggcatgttatcataagg
tactctattcacttgtgggacctgaattacgagggtacctgggagagcaaaggcacttat
gtctactacactgactttgttatggaccttgcccttctctgccttgatctaatgcatcac
attcacatgctgctttttggaaatatttggctgtccatggccagcctagtgatatttatg
cagcttcgttacctcttccatgaggtacaaaggagaatccgccgccacaaaaactacttg
cgtgtcattgacaacatggagtccaggttttcagtagccacccctgaggagctggttgcc
aataatgatgattgcgcaatctgctgggattcgatgacttcagcacggaagctgccctgt
ggacacctctttcacaattcatgtctacgctcatggctggaacaggacacgtcctgccca
acgtgccggatgtcgcttaatattaatgagggtggcagagagcgggaagagggccagagg
gcaccaattgatgacaacatggctccaggccctggaaatgatgctcgacctcaattcaac
cagcataaccacttctttcactttgatggttcacgaattgctagctggcttccaagtttc
tctgtagaagtaatgcacacaaccaacatcctgggcatcgcacatgccaataactctcag
ctcaatgccatggcccaccagatccaggagatgttcccccaagttccctaccacctggtg
ctgcaggatttgcagctcacccgttctgtggaggtcaccactgacaatattctggagggc
aggatccaggtgccctttcctgcccagcccctggaacgtgcacccatccaggcaaattta
gtgccagaggagtctgcaggggccagtgggggtccagagctccccaatacggagacagag
gaccttgagatgcgcggcagccgcttctccaaatctgcggatgagaggcagaggatgctg
catcagaggaaagaagagttgctacaaagagcacgcaggcgctatctgaacaaaaacaat
ggagcatcttccttcacttctgttgcaccagagaaagatgaagatgactaccctgaagac
aacgacgacgatgatgataatgctccgtcctctctgaaagttgaaggttccaactctgac
ttggtaaccttgcgccgcagggtattggcagatgcagctgagcggcgcttgcagaggcag
cctgactcatccatctga
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