Trichomycterus rosablanca: 134309969
Help
Entry
134309969 CDS
T09921
Symbol
ecm1b
Name
(RefSeq) extracellular matrix protein 1 isoform X1
KO
K23867
extracellular matrix protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
134309969 (ecm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECM1
Motif
Other DBs
NCBI-GeneID:
134309969
NCBI-ProteinID:
XP_062847537
LinkDB
All DBs
Position
3:complement(53238187..53264892)
Genome browser
AA seq
576 aa
AA seq
DB search
MDGMRAHLLLCLLLVVRAAEDPFTDLRDEIFTPLGPEFEGLAVQKPIESFLPIDLLDEWM
QRTVARDESPAVEEKGPTRPPVSHQLHDYYVPFPLGRPTLNNIFAICHYSGRRSWYPKEK
LPDSGFGSIIRQIKANNKLEYWFPVCCGNNSTQDEELTLCCAEQAWKESLADFCWEELSI
KTIPFHCCKLDGSEIWKCFEKFAVDHDYLPTNQSLWTPSPSIIENFDFNPSTCKRTSIQE
DVPEVLRERETLRPRSKPSDLDLSMYSGMEQRMVIPDIPLTVSERAPERPPVDDSIPIIK
GLRFPPARPTASDILTICQYGDRRPRRSISESLRSPVVRKLNIVFPPGRPTSANIASICT
NRERRPLYPSGGLTGLGAHQWRAMDMLDKAFAKCCKEKTNIHACAMKKWKRMVRNFCRKE
QQHSEKPFDCCGRTTRNDQYDCFAAASPNPGYTLVNVNFAALRTTPTSNMFCNTYTKYKY
GSDSDYKFNEMAEECCSLPDGMKLTCIQMKLNNVCKNQQRLFCCGMRRSECLNKLLLRYM
AASNILTTKGTICPMSFDKVMSVVSSDAFDPNGILS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatgagagctcatctcctgctgtgtctgctgctggtggtcagggcggcggaa
gatccttttacagacctaagagacgagattttcaccccactgggtccagaatttgaaggt
ttagcagtccagaagccaattgaaagttttttaccaattgatctcctggatgaatggatg
cagagaacggtggcacgtgacgagtctccggctgtagaggagaaaggtcccacacgccct
cctgtgtcccatcagctccatgactattatgttccctttcctctcggccgtccaaccctc
aacaacatctttgccatttgtcactacagtggccgacgttcctggtatcctaaagaaaaa
ctaccagacagtggttttggtagtataatccgtcagatcaaggctaacaataaactggag
tactggttcccagtgtgctgcggtaataacagtacccaggatgaagaactgaccctgtgc
tgtgctgagcaagcgtggaaggaatctcttgctgacttctgttgggaggaactctctata
aagaccattccctttcactgctgcaagctggacgggtcagaaatatggaaatgctttgag
aagtttgctgtagaccacgattacctgcctactaaccagagcttgtggactccgtccccc
tccatcattgaaaactttgactttaatcccagtacctgcaagagaacaagcattcaagaa
gacgtacctgaagttctgagagagagggagaccttgagacctcgatctaaaccttcagac
ctcgacctgtccatgtattcaggcatggagcaaagaatggtgatccctgacattccttta
acagtgagtgagagagctcctgaacgcccccctgtggacgattccattccgattattaaa
ggccttcggttccctcctgcccgtccaaccgccagcgatatcctcaccatttgccagtac
ggtgaccgtcgaccccgtcgcagcatttcagaatctctcagatctcctgtggttagaaag
ctgaacatcgtcttcccccctggtcgcccgacttctgccaacatcgcctccatttgcact
aatcgcgagcgtcgccctctctacccatccggcggtctgactggtttgggcgcccaccag
tggagagccatggacatgctggacaaagccttcgctaagtgttgtaaagagaaaacaaac
atacacgcctgcgctatgaagaagtggaagaggatggtgaggaatttctgtcggaaagaa
cagcagcacagcgagaagccgttcgattgctgcggacgcacaacgagaaacgatcagtac
gactgtttcgccgccgcctccccgaacccgggctacacgctagtcaatgttaactttgcg
gcgttacgaacgactcccacttcgaacatgttctgcaacacctacaccaaatataaatat
gggtctgattcagattataaattcaatgagatggctgaagagtgctgcagcctaccagac
ggaatgaagctgacgtgtattcagatgaagctgaataatgtttgtaaaaaccaacagcgg
ctcttctgttgcgggatgagacgctccgaatgcctcaacaagctgctcttacgctacatg
gctgcatcaaatattctcaccaccaagggcacgatatgcccgatgtccttcgataaagtt
atgagcgtcgtgtcttcagacgcttttgacccgaatggaatcctgagttga
DBGET
integrated database retrieval system
