Trichomycterus rosablanca: 134309976
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Entry
134309976 CDS
T09921
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134309976 (nop2)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
134309976 (nop2)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
134309976 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
PCMT
Methyltransf_31
FtsJ
DUF723
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
134309976
NCBI-ProteinID:
XP_062847549
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Position
3:53727953..53746843
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AA seq
776 aa
AA seq
DB search
MGRKFDPTNKVKRGPGRKARKQRGAETELAKFLVHDAEPKKLSSRARKRAVKRTQVTAAP
TETKPPKQGFTDENSKWLKPAGRKRKLEEPAEDEDSDSQWEEEEDEELGAAKAKLEESGG
EEEEEEDEEMVDDYGAMEASSDAEEHEEADSDGEELLPIERAARKLKQRQEARPSEEDDD
EDEDGEEDESEDGEMDGTQEEEDEEEDTVQANIDATESFKLPVSAEKEGLLSLDLQSIHQ
RIKDVVDVLSHFSERREEGRERSEYVALLKSDLCTYYSYNDFLMSKLMELFPHSELIEFL
EANEVQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEY
LAGHYMLQGASSLLPVMALSPQEGESVLDMSSAPGGKTTYMAQLMKNTGVIVANDASADR
LKSVVGNIHRLGVINTIICNYDGRQFPKVMGGFDRVLLDAPCAGTGVIAKDPAVKTSKDE
SDILRSAHLQKELILAAIDSVNADSQTGGYLVYCTCSITVEENEWVVDYALKKRNVKLVP
TGLDFGKEGFTRFREKRFHPSLKLTRRVYPHSHNMDGFFVAKLKKFSNAIPSVPTDKEEK
EEATDKTETPGTSSEKNPKSGSKKHTEGAAQQKSADNKQPKSPKNAQKPAQKPAQKPAQK
TAQKPAQKTAQKPAQKTAQKPAQKTAQKQQTVVTSKRLKAEGPQKKKKAKLGGQNSNKGK
DPEEGKVKTNEENLLKKKNQKQKQNQKSLLKTRKNQLGKNKFKKLKNVLKKQEAGE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaattcgatcccaccaacaaggtgaaacgcggcccgggacgcaaagccagg
aaacagagaggagccgagaccgagctggccaagtttttagtgcacgatgccgagcctaaa
aaactgtcgagccgagcgaggaagcgagcggtgaagagaacgcaggtcactgctgcaccc
acagagacaaaaccacccaaacaaggattcacagacgagaacagcaagtggttaaaacct
gcggggcgaaaacgcaaactggaggaaccggcggaggacgaggacagtgacagtcagtgg
gaggaagaggaggatgaagagctgggagctgcaaaagcaaaactagaggagagcggcgga
gaggaggaggaggaggaggatgaagagatggtggatgattacggagcgatggaggccagc
agtgacgccgaggagcatgaggaagccgacagtgacggggaggagttgttacccatcgaa
cgagcggctagaaaactgaaacagcgccaggaggctcgaccgagtgaggaagacgacgat
gaagacgaggacggagaggaagatgaaagtgaagatggggagatggatggtacacaggag
gaggaagatgaagaggaggacaccgtgcaggcgaatatcgacgccaccgaaagcttcaaa
cttcctgtttcggctgagaaagagggacttttatcgctagacctgcagagcatccaccag
aggatcaaggacgtggtggacgtgctgtcccacttcagtgagaggagggaggagggcagg
gagaggtccgagtacgtggccctgctgaagtctgacctctgcacctactacagctataac
gacttcctcatgagcaagctgatggaactgttcccccactctgagctcatagaatttctg
gaggcgaatgaagtccagaggccagtaaccatcagaaccaacacgctcaaaaccaggagg
agagacctggctcaggctctgatcaacaggggtgtaaaccttgatcctttgggaaagtgg
tccaaagtgggtctggtcatctttgactcctcagtacccatcggtgcgactccggagtat
ctagccggacactacatgctgcagggggcgtcgtcgctgctccctgtaatggcgctctca
ccgcaggagggcgagtccgtgctggacatgagttcagctccaggaggcaaaaccacgtat
atggctcagctgatgaagaacacgggtgtaatcgtggctaacgacgccagcgctgacagg
ctgaagagtgtggtggggaacattcaccgactgggagtcatcaacaccatcatctgtaac
tacgacggcagacagttccctaaggtgatgggaggttttgaccgggtgctgttggacgcc
ccgtgcgctggtacaggagtcatcgccaaagatccagcagtaaaaactagcaaggacgag
tcggatatcctgcgctcggctcacctacagaaggagctgattctggcggccatcgactcg
gtgaacgccgactcgcagaccggcggctacctggtgtactgtacctgctccatcacggta
gaggagaacgagtgggtggtggactatgccctgaagaagagaaacgtcaaactggttccc
actggattagactttggcaaggagggtttcaccagatttcgagagaagcgcttccatccc
tccctcaagctgactcgacgcgtctacccacactcgcacaacatggacgggttctttgtc
gcgaagctgaagaaattctccaacgccatcccgtccgtacctacagataaagaagaaaaa
gaagaagcgacagataaaacggagacgccgggtacgtcctcggagaagaacccaaaatcc
ggatccaaaaaacacaccgaaggtgcagcgcagcagaaatcagcagacaacaagcaaccc
aaaagccccaaaaacgcccagaaacccgcccagaaacccgcccagaaacccgcccagaaa
accgcccagaaacccgcccagaaaaccgcccagaaacccgcccagaaaaccgcccagaaa
cccgcccagaaaaccgcccagaaacaacagactgtagtaacgagtaaacgattaaaagct
gaaggtcctcagaagaagaagaaggccaaactgggtggtcagaactcaaacaagggcaag
gacccagaggagggcaaagtgaaaacaaacgaggagaacctgctcaagaagaaaaaccag
aagcagaagcagaatcagaagagcctgctgaaaaccagaaagaaccagttggggaaaaac
aaattcaagaagttaaaaaacgtgctgaagaaacaggaggctggagagtaa
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