Trichomycterus rosablanca: 134310075
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Entry
134310075 CDS
T09921
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134310075 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134310075 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134310075 (taf2)
03036 Chromosome and associated proteins [BR:
trn03036
]
134310075 (taf2)
Peptidases and inhibitors [BR:
trn01002
]
Metallo peptidases
Family M1
134310075 (taf2)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134310075 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
134310075 (taf2)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134310075 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
AP3D1
Motif
Other DBs
NCBI-GeneID:
134310075
NCBI-ProteinID:
XP_062847661
LinkDB
All DBs
Position
3:10192224..10217886
Genome browser
AA seq
1225 aa
AA seq
DB search
MAECGESVSCERYSLSDNTTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLNSKQ
CRIYRVRVNDLEVPFIYNDPTLEVCHHESKQRNLNYFSSAYAAAVSAVDADAGNGELSIK
VPSEIWKLGDEIKVLKVYIEFSLDQPKGGLHFVVPDMEGSMAEKGAHVFSCGYQNSTRFW
FPCVDSYSELCTWKLEFTVDASMVAVSGGDLIETIYTHDMRKKTYHYLLPIPTAAPNISL
AIGPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEVFEFYEEILTCRYPYSCFKTVFV
DEAYVQVSSYASMSIFSTNLLHSSVIIDQTPLTRRCLAQGLAQQFFGCYISRMSWSDEWV
LKGISGYIYGLYLKKTFGVNEYRYWIREELDKIVEYELKTGGVLLHPTFIGGKEKDSPTP
HLHFSIKHSHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQ
SHMWSQMLLSTSGFLKSISNVSGKDIGPLMKQWVDQSGVVKFFGSFAFNRKRNVLELEIR
QDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNG
EEVDMDLSAMEAERGSRGRAGRDRIGAELSRRASTTFFSQGADSPLLWIRIDPDMSVLRK
VDLAQADFMWQYQLRYERDVVAQEEAIVALEKFPSASSRLALTDILEYEPCFYKVRMQAC
FCLAKIANAMMSTWSGPPAMKSLFTRMFCCKSCPNIVKTNNFINFQSYFLQKTMPVAMAL
LRDIQNLCPKEVLNFILDLIKYNDNSKNKFSDNYYRAELIDALTNSLTPAISINNEVRTI
DNLSADIKFILEEVTRYLNMEKLLPSYRNIVTVSCLRAIRMLQKNGHIPSDPSLFKAYAA
YGHFVDVRVAALEAVVDYTRVDRSAEELQWLLDLVQNDPAHYVRHKILSMMSKNPPFTKA
AESPLCTEALVDQLWKLMNSGTSHDWRLRCDAVNVYHTLFGLTRPACLPLPELGLVLNLK
EKKAVLNPTIKSEQEGPELMPEMIFTGSIKDDQIVIEPALGSMALATQGLKRKAETPLAS
PPEPGQVLQDEPMVKATVKSRFPTQDEEDIDMDTVHDSQAFIYHHLNMLERPSTPGREPP
AVEQVAMSMPATPVPGFIKEGTTSSSSKHHHHHHHHHHEHKKKKKKHKHKHKHKHKHESK
DREKDRDFMGFSNSPASIRSPSLSD
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatgtggagagtcggtgtcgtgtgagcgttattctttatctgataacacaacc
catcaggtggtgtgcatcaacaacatcaacttccagaggaaatcagtcattggctttgtg
gagctgaccatctttcccaccgtggtgaacctgaaccgcattaagctaaacagcaagcag
tgtcgcatttacagggtgcgagtgaatgatctggaggtgccctttatttataacgacccc
acacttgaggtctgccatcatgaatccaaacagaggaacctgaactatttttccagtgcg
tacgctgcagctgtgagtgctgtggatgcggatgctgggaatggagagctgtccattaaa
gtaccctctgagatatggaagcttggagatgagattaaagttctgaaggtgtacatcgag
ttctcactggaccagcctaagggtgggctccattttgttgtacctgacatggagggcagc
atggctgaaaagggagcacacgtcttctcctgcggatatcagaattccacaaggttctgg
tttccatgcgtggactcgtactcggagctgtgcacgtggaagttggagtttactgtggac
gcctcaatggtggcagtgtctggcggtgacctcatcgagaccatctacacacatgacatg
cgcaagaagacctatcactatctgctgcccatccccactgctgcccccaacatctcactg
gctatagggcccttcgagattcttgtggacccgtacatgcatgaggttacacatttctgc
ctgccgcagctgctgcctctgctgaagcacaccatgtcgtacctgcacgaggtgtttgag
ttctacgaggagatcctgacatgccgctacccatactcctgcttcaaaacggtttttgtt
gatgaagcctatgtgcaggtctcctcctacgcctccatgagtatctttagtacaaacctg
ctccacagtagtgtgatcattgaccagaccccactgacacgccgctgcttggcacagggc
ctggcacaacagttttttggctgctacatctcccgtatgtcatggtctgatgaatgggtc
ctgaagggcatctcaggctacatatatggcctctacctcaaaaagacgtttggagtcaat
gagtatcggtactggatccgtgaggagctggataagattgtggaatatgagctgaagaca
ggaggtgtcctactgcaccctactttcattggaggaaaggaaaaagacagcccgactccc
cacctgcatttctccatcaaacactcacacacactttcctgggagtactacaaaatgttc
cagtgcaaagctcacctggtcatgaggctgatcgagaaccgaatcagcatggagtttatg
ctgcaggttttcaacaaactgctgagtctggccagcactgcatcgtcacagaagtaccag
tcacacatgtggagccagatgctcttatccacctccggctttctcaagtccatctccaac
gtgtcggggaaagacatcggacccttgatgaagcaatgggtagatcaaagtggggtggtg
aagttttttggcagctttgcttttaacaggaaaaggaacgtgctggagctggagatccgc
caggactatacttcttctggcacccagaaatatgtgggccccataaaggtgacggttcag
gagttggacggatccttcaaccacacgctacagatagaagagaacagccttaaacatgac
ataccctgccattccaaaagcagaagaaacaagaagaagaaaatccctttgatgaatggt
gaggaggttgacatggacctatcagccatggaagcagagagaggcagtagaggcagggct
ggtagagacaggattggtgcagaactaagcagaagagcatccaccacattcttcagccaa
ggtgccgactctccactgttgtggattcggatcgacccggacatgtcggttctgcggaag
gtggatttagcccaagctgacttcatgtggcagtaccagctgcggtacgagcgggacgtg
gtggcacaggaggaggctatcgtggcgctggagaaattcccctctgcttcctcacgcctc
gccctcacagacattctggagtacgagccgtgcttctacaaagtgcgcatgcaggcctgc
ttttgcctggccaagatcgccaacgccatgatgagtacatggtccggtcctccagcaatg
aagtccctcttcacacgcatgttctgctgtaagagctgtcccaacattgtcaagaccaat
aactttatcaacttccaaagctacttcctgcagaagaccatgccagtggctatggcattg
ctcagggacatacagaatctttgccccaaagaggtgcttaacttcattctggacctcatc
aaatacaatgataacagcaagaacaagttttctgataactactaccgtgctgagttgatt
gatgccttgaccaactcattaacaccagccatcagcatcaataacgaggtgcgcactata
gacaatctgagcgcagacatcaagtttatcttggaggaagtgactcgctaccttaacatg
gagaaactgctgcccagctacagaaacattgtcaccgtcagctgcctacgggccatcagg
atgctgcagaagaacggccacattcccagtgaccccagcctatttaaggcatacgctgca
tacgggcattttgtggatgtgagggttgctgctctggaggctgtggtcgactataccaga
gtggacaggagcgctgaagagcttcagtggttgctggacctggtccagaacgatccagca
cactacgtcagacataagattcttagcatgatgtccaagaatccgcccttcaccaaagct
gctgagtcgcccctgtgcaccgaggctctggtggaccaactatggaagctgatgaactct
ggtacatctcatgattggcgtttacgttgtgatgctgtaaacgtctaccacactcttttt
ggcctgacgagaccagcctgcctgcctctccctgagctcggccttgttctcaatctgaaa
gaaaagaaggctgtccttaaccccaccattaaatcagaacaggagggtccggagctaatg
ccagagatgatcttcaccggcagtatcaaggatgatcaaatcgttatagagccggcattg
ggtagcatggcccttgctactcagggcctgaaaaggaaggcagagactcccctggcttcg
ccaccagagcctggacaagtgctgcaggatgaaccaatggtcaaagcaactgtcaagagc
cgatttcccactcaggatgaagaggacatagatatggatacagttcatgacagtcaggcg
ttcatttaccaccacctaaacatgctggagaggccttccacaccaggtcgagaacccccg
gcagtagagcaggttgcgatgtccatgccagccactccagtgcccggttttatcaaggaa
ggcaccacctcttcctcgtccaaacaccaccaccatcatcaccaccatcaccatgagcac
aagaaaaagaagaagaagcacaaacacaagcacaagcataaacacaagcatgagagcaag
gacagagaaaaggaccgtgattttatgggcttctcaaatagtccagccagcattcgctca
ccctctctgtctgactga
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integrated database retrieval system
