Trichomycterus rosablanca: 134310255
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Entry
134310255 CDS
T09921
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134310255 (irx2a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134310255 (irx2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
DUF7365
Paf1
Motif
Other DBs
NCBI-GeneID:
134310255
NCBI-ProteinID:
XP_062847872
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Position
3:8808449..8820640
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AA seq
437 aa
AA seq
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MSYPQGYLYHPGPGSLALYPLRSEELELAARCSSSSSSSSSSSSSSTGSAFTPYPASAAF
AASAAGGFASALPYTDPTTGFPSYMASPYDPPPPAMAAPLGFPPYGSAGFPPSPYQLNDP
AYRKNATRDATSTMKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
NKMTWGAQCKSDDEEEEEGTRTERKDDEEEEKHNDNGDASAEDEGISLHVDSLTDHSVES
DGEKVPCRIDGFPCKPVPDLKDKRSEIDLTSPHGSHGSLSPKPMTSSPLSGVEAPVSDPH
RDKTKVCTDTQSQNTKPKLWSLAEIATSDNKQNQNCSSTGGIWSSGQSGASPTASILARP
IYYTSPFYGNYGSYGNFGQGILRYGSIHKHSPETMLKVNHANQVQTEQHFIRASNAEAKK
ADLGEVCTLGPQYFLSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacctgtaccatcccggcccgggttctctggctctctacccg
ctccgaagtgaagaactggagctggcggctcggtgctcctcttcatcttcgtcttcttcc
tcctcttcttcatcctccaccggatccgcgtttacaccgtaccccgcatcggccgccttc
gccgcatccgccgcgggaggcttcgccagcgctctgccctacaccgacccgaccactggc
ttcccctcctacatggcctctccgtatgacccccctcccccagccatggcggctcctctg
gggttccctccgtatggcagtgctgggtttcctccttccccatatcagctaaacgacccg
gcgtacaggaagaacgccacccgtgatgccaccagcaccatgaaggcctggctacaggaa
cacaggaagaacccataccccaccaagggtgagaagatcatgctggccattatcaccaag
atgaccctcacccaggtttccacgtggtttgccaacgcccgtcggagactgaagaaagag
aacaagatgacatggggagctcagtgtaagagtgatgatgaggaggaagaggaaggaact
cgtactgagaggaaggacgatgaggaggaggaaaaacacaacgacaacggagatgcatct
gcagaggacgaaggtatcagtttgcacgtcgactccctgaccgaccactcagtcgaatca
gatggagagaaagtcccctgtaggatcgatggcttcccctgcaaacctgtacctgaccta
aaggacaaacgttctgagatcgacctgacctcgcctcacgggagtcatggcagtctgtcg
cccaaacccatgacatcatcgcccctgagcggagtggaggcgccggtctcggacccgcac
cgcgacaaaaccaaggtctgcacggacactcagagccaaaacaccaagcccaagctgtgg
tcattggccgaaattgccacttcagacaacaaacagaaccagaactgctcctcgacgggc
gggatttggtcctccggccagtcaggtgcttctcccactgcatccatcttggcaaggccc
atctattacacatcacctttttatggcaattacggcagttatgggaacttcgggcaaggg
atcctgcgctatggttcaatccataaacacagtcctgagaccatgctaaaggttaatcat
gctaatcaagtccagacggagcagcacttcatcagggcctcgaatgcagaagctaagaaa
gcagacttaggtgaagtgtgtacactcggtcctcagtacttcctgtcaagctaa
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