Trichomycterus rosablanca: 134310391
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Entry
134310391 CDS
T09921
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134310391 (nphp3)
Cilium and associated proteins [BR:
trn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
134310391 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3
NPHP3_hel
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_14
NPHP3_N
TPR_11
TPR_19
AAA_16
TPR_6
AAA_22
NACHT
Uso1_p115_C
DUF2225
AAA_33
AAA_19
DUF4635
14-3-3
Motif
Other DBs
NCBI-GeneID:
134310391
NCBI-ProteinID:
XP_062848041
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All DBs
Position
3:complement(21219717..21279279)
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AA seq
1301 aa
AA seq
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MGTASSLVSPGDVIEEAYGAEGGEACEIPVEVKLKPKLLRSSFRRGPRVIGSSFKSTGSM
ELEYAAEYERLRKDYEIFRVSKNNEITAMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAQ
GIQLYEPADSDSDDNHTSVTTAGTQCEYWSGGILGSEPSMGSMMQLQQAHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLIYTQETKPELNIFIQNYLP
SLKRFCEGLGHFYLNVCFPEEKATLYSHERKTEIKRSSVCVLLLKSLVSSCMVEDVEEAF
VRNPDARPLLIYLKTEEKKSECEGTSCLSLGARDLLERVNNADKGAKVKVVDHAGSAEDG
ALLINAQLEKIIKQELLGLEPDYSSTLEDRDDLDSGDVLWDLHDEQEQIEAYQHICSTAA
NLSLQKYIDGLNDMVAAPPPTPPLLVSGGPGSGKSLLLAKWMELQQKHSPNTLILYHFVG
RPLSTSAEPVLIIKRLTVKLLQHFWSLSGLSMDPCKTLEEFPRWLERLSSRHHGNIVIVI
DSIDQIQNAERHMKWLIDPLPANVRVLVSVNVETCPQAWRLWPTLHLDPLNQKEVKSVIN
TESTLTKLTKDQEKKLEKHCRSASTCNALYVSLLARLLTFSRSTWSLEKLLHHGSLCQDT
VALYRLSLKVVLDALNTDRERHVMKEFLCLLCASHNGISESELLEIFPELSFPALSSLLC
RLQNLLIISFSCGLVRFQHLQACEAVMQEFLNGGRCASYRENLIQYFSQQLSKDRVTWRV
ADELPWLLQQNGERSKLHLILLNLFVSQNLYKRGHFSELLAYWQFVGKDKVSMSAEYFDA
LKEFEQNCESEESMTRLANLYETLGRFLKDLGLLSQSVPPLQRSLEIRETALDPDHPSVA
QSLHQLAEVYVHWRKFGNAEQLYKQALEISENAYGAEHSSVARELDSLSLLYQKQNKYEQ
AEKLHKRSVKIRQEMARHKGHMYGFTLLRRRALQLEELTLGKDSADCAKTLNELGVLYYL
QNNLDAAKVFLTRSLEMRQRVLGADHPDCAQSLNNLAALHCERKDYESAEQLYEKALEIR
KRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATALVNL
AVLYCQLKKHSEALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIREAEPSLVCGKAPSHHSSSGDNFSLRSPVHLPHNHR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgcctcatctctggtaagccctggggatgtgatagaggaggcatatggagct
gagggtggagaagcatgtgagattcccgtggaagttaagcttaagccaaaattgctacgt
agctcgttccggcgtggcccacgtgtcatcggctccagcttcaaatccactggctccatg
gagctggagtacgctgctgagtatgagcgcctcaggaaagactatgaaatctttcgtgtt
agtaagaacaatgagatcactgccatgcagaagaaagaggccaaactggatgaggagaac
aagagactgcgtgctgagctccaggctttgcagaagacctaccagaagattctgagggag
aaggagagtgctttggaggcaaagtaccaggccatggaaagagcagccacctttgaacat
gacagagacaaagtaaaacgacagtttaagatcttccgtgagaccaaagaaaaggagatt
caggatttgttgcgggcgaagcgtgatttggagtccaaattgcagcagctacaagctcag
ggaatccagctgtatgagcccgctgactctgattcagatgacaaccacacaagtgttact
actgcagggactcagtgtgaatattggagtgggggcattctgggtagtgagccctccatg
ggaagtatgatgcagcttcagcaggcacacagaggccctgagtttgcccatagcctcatt
gatgtagagggtccatttgcaaatgtcagcagagatgattgggatgcggcggttgccagt
ctgttgcaggtctctcctcatgtttctcaggctttgtggagtaacacagtccgctgttac
ctcatctatacccaagaaaccaaaccagaattaaacatttttatacagaattatttaccc
agtttaaagaggttttgtgagggtttgggccatttctacctgaatgtgtgtttccctgag
gagaaagccactctgtacagccatgagcgcaagacagagatcaagagaagctcagtgtgt
gtcctgctgcttaaatccttagtgtccagctgcatggtggaagatgtagaggaggctttt
gtgcggaatccagatgctcgtcccctactaatatatctgaagacagaagaaaagaaatca
gagtgtgagggcacttcctgtctcagtttgggtgctagagatctgctagagagagtaaat
aatgcagacaaaggtgctaaggttaaggtggtggaccatgcaggctctgctgaggatgga
gctctgcttattaatgctcagctagagaagattataaagcaggaactgttgggtttggaa
cctgattacagtagcacactggaggacagagatgatttggactctggtgatgtgttgtgg
gatcttcatgatgagcaggagcagatcgaggcttaccagcacatatgcagcactgcggca
aatcttagcttgcaaaagtacattgatggcctgaatgatatggttgctgctcctcctcca
actcctccattgctggtatcgggaggaccaggctcgggcaaatcactccttcttgctaaa
tggatggagctacagcagaagcactcgcccaacacgctgatcctttatcattttgtgggt
cgtcctctatccaccagcgcagaaccggtcctcatcatcaaacgtcttactgttaagctc
ttgcagcatttctggtctctttctggcctgtctatggatccctgtaagacactggaagaa
tttccacgctggcttgagagactgtcctcacgccatcatggcaacattgtaatagtcatc
gattccatcgaccaaattcaaaatgctgaacgacacatgaagtggcttatagatccactt
cctgccaatgttagagtgctagtatctgtcaatgtggagacatgcccacaggcatggagg
ctgtggcccacgttgcacctggaccctctcaaccaaaaagaagtgaaaagtgtcatcaat
acagagagcacactgaccaaacttactaaagaccaggaaaaaaagttggagaaacactgt
cgttctgcttcaacttgcaatgcactttacgtttcacttctggccagacttcttacattc
tctagatcaacctggtctttggaaaaattactacaccatggttcactatgccaggacaca
gtggctctgtatagactcagccttaaggttgtactagatgcacttaacactgacagagaa
aggcacgtcatgaaagaattcttgtgcctgctgtgtgccagtcataatggcattagtgaa
tctgaactcttggagattttcccagagctgagttttccggcgctctcttctctcctctgc
agactgcaaaacctcctgattatctccttcagctgtggccttgtccgctttcagcacctg
caggcatgtgaggcagtaatgcaggagttcctcaatggagggagatgtgcttcatacaga
gagaaccttattcagtattttagccagcaacttagtaaggacagggtgacatggcgtgtg
gcagatgagttgccctggttgctgcagcagaacggagagagaagcaaacttcatcttatc
ttgctcaacctgtttgtctcacagaatctctacaaaagaggtcatttctcagagctgcta
gcatattggcagtttgttggaaaggacaaagtgtccatgtctgcagaatattttgatgct
ctgaaggaatttgagcagaactgcgagagtgaagaaagcatgaccagactggccaacctg
tatgagacactgggtcgattcctcaaggacctgggccttctcagtcagtctgtgcccccc
ctgcagcgctctttggagattcgcgagacggctttagacccagatcatcccagtgtggcc
cagtcactgcaccagctggccgaagtctacgtccactggagaaagtttggcaacgccgag
cagctgtacaagcaggcgctggagatcagtgagaacgcctacggagccgagcactcgagt
gtggcacgagaacttgactccctctcgcttctctaccagaaacaaaacaagtatgagcaa
gctgagaaactgcacaaaaggtcagtcaaaatcaggcaggaaatggctcggcataaaggt
cacatgtatggttttactctactgcgtcgacgagcactgcagttggaagagctgactctt
ggtaaagactcagctgactgtgccaagacactcaatgaactcggagttctctactacctt
cagaacaacctagatgcagcaaaagttttcctgactcgttcactggagatgcggcagcgt
gtgttgggtgctgatcaccctgactgtgctcagtctctgaacaacctggcagcccttcac
tgcgagaggaaggattatgagagtgctgaacagctgtatgagaaagcgctggaaatccgc
aagcgagccctcgctccggatcacccatcactcgcctacaccctcaaacacctagccatg
ctgtacaaacgcagagggaagctggagaaggccgtgcctctgtatgagctggctctggaa
ataagagagaagagctttgggcccaaacacccgagtgtggctacagctctggttaacctc
gctgtactttactgccagctgaaaaagcacagtgaggctttaccactgtatgagcgggcc
ctaaaagtgtatgaggacagcctcgggcgactgcatcctcgtgttggagagactctgaaa
aacctggctgtgctcagttatgaagaaggagattttgagaaagctgctgagctgtacaaa
cgagccatggagatcagagaggcagagccatcgctggtgtgtggtaaagctccatcacat
cactcgtccagcggggacaacttcagcctgcgtagccctgttcacctacctcacaatcat
aggtga
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integrated database retrieval system
