Trichomycterus rosablanca: 134310430
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Entry
134310430 CDS
T09921
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134310430 (trpc1)
Ion channels [BR:
trn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134310430 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
134310430
NCBI-ProteinID:
XP_062848092
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Position
3:complement(27232610..27279961)
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AA seq
793 aa
AA seq
DB search
MRLGLPVLMSALYRGPSTASPRAHLALKDVREVQEETSLDEKLFLLACEKGDYYMVKKLL
EEKKHGELNINCVDVLGRDAVTITIENENLDILQLLLDHGCKTTDALLVAIDSEVVGAVD
ILLNHRPRRSSKPSMASLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPR
PHAVGCECTLCLAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSADLKEL
SLVEVEFRTDYEELAKQCKMFAKDLLAQARNSRELEVILNHTCSEDHVDKRGLLEERMNL
SRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTGLKLLTVLGVALLWPLLSVC
YLLIPRSRVGHMIHTPFVKFIIHSASYLTFLLLLNLYSWVYNKNQKNTMGPDLEMIDYLL
ILWIIGMVWSDVKRLWYEGLEDFMEESRNQLSFVMNSLYLACFTLKVVAYLKFNHVHKSE
RKDWQASHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFLGLFL
LVLFSFTIGLTQLYGKDQKDPSMPKNDSKDCEGIFCKQQSNDTFHTFMGTCYALFWYIFS
LAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNILPSPKTLCYIVTSLSKWICSHTSTGKVKRQNSLKEW
KNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDLLG
FRTSKYAMFYPRS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcggcctccccgtgctgatgtctgcgctgtaccggggcccatccacggcctcc
ccccgcgcccacctggccctaaaagacgtgcgggaggttcaggaggagaccagcctggat
gagaagctctttctgctggcctgcgaaaaaggtgattactacatggtgaagaaactgctt
gaggagaaaaagcatggtgagcttaacattaactgtgtggacgtgctggggagagatgca
gtcaccatcactattgagaatgagaacctggacatcctgcagttgctcctggaccatgga
tgcaagacaacagatgctcttttggtggcaattgactctgaggttgtgggagctgtggac
atccttcttaaccatcggcccagacgatcctccaaaccctctatggcgtcactgatgcag
cgtatccagaacccagaatattccaccaccatggatgtggctcctgtaatcctggctgct
cacaggaataactatgagatcctgaccatgcttctgaagcaggatatctcactgccgaga
ccacatgctgtgggatgtgagtgcactctctgccttgccaagaacaagaaggacagtctc
cgtcactccagatttcgtctggatatctaccgctgcctggcaagcccatcacttatcatg
ctgacagaggaggaccccattctgcgagcctttgagctcagcgctgatctcaaggagctc
agtctggttgaggtggagttcaggactgattatgaagagctggctaagcagtgtaagatg
tttgctaaggacctgctggcccaggcacggaactctcgggagcttgaagtaatcctgaat
cacacatgcagtgaggatcatgtggataagagaggactgctggaggaacgcatgaacctc
agccgcctcaaactggccatcaagtataaccagaaggagttcgtcgctcagtctaactgt
cagcagttcctgaacacggtgtggttcggtgagatggctagttaccggcgtaaacacact
gggttgaagctgctgacggtgctgggtgtagctctgctatggcctctgctctccgtatgt
tacctgctcataccacgttcacgagtgggtcacatgatccacactcccttcgttaagttc
atcatccacagtgcctcctaccttaccttccttcttttgcttaacctctactcatgggtc
tacaacaagaaccagaagaacaccatgggcccggacctggagatgatagactacctgctt
atcctctggatcataggaatggtgtggtcggatgtgaagcgcctttggtatgagggactg
gaggatttcatggaggagtcgaggaatcagctgagttttgtcatgaattcactctatctg
gcctgcttcactctgaaggtggtggcttacctcaagtttaaccacgtccataaatctgag
cgaaaagactggcaagcatctcaccccatcctggtagctgaggggctttttgccttcgct
aatgtcctgagctatctgcgcctgtttttcatgtacaccaccagctccatcctcggccct
ttacagatatcaatgggtcagatgcttcaggagtttggaaagttcctcggcttgttcctg
ctggtcctattttccttcaccatcggcctgacgcagctctacggaaaagaccagaaagat
ccatccatgccaaaaaacgacagcaaggactgtgaaggaatcttctgtaaacagcaaagc
aacgacaccttccacacgtttatggggacgtgttatgctttgttctggtacatcttctca
ctggctcatgtagcactcttcgtaaccaggattagctacacagaggaattacgctcgttt
gtgggagctcttatagtcggcacttacaacattgtggttgtgattgttcttaccaagctt
ctggtagccatgctgcataagagcttcagacagattgctaaccatgaggataaggagtgg
aaatttgctcgtgctaagctctggctcagctactttgatgataaatgcacactgcctcca
ccgttcaacatcctcccatccccaaaaactctgtgctacatagtgacaagtctgagcaag
tggatctgctcccacacgtccacgggcaaggtgaagagacagaacagcctcaaggagtgg
aaaaacttaaagcaaaagagggatgagaactatcagaagatcatgtgctgcttggtacac
cgctatctgacctccacacgccagaagatgcagagcactgatcaggccacagtagagaac
cttaacgacctgcgccaagacctgtccaagttccgcaacgagatgagagacctgctcggc
ttccgcacatccaaatacgccatgttctaccccagaagctaa
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