Trichomycterus rosablanca: 134310600
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Entry
134310600 CDS
T09921
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134310600 (trim71)
04121 Ubiquitin system [BR:
trn04121
]
134310600 (trim71)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134310600 (trim71)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134310600 (trim71)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134310600 (trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
Beta-prop_IFT122_1st
zf-RING_2
zf-C3HC4_4
CEBP_ZZ
DUF4094
Motif
Other DBs
NCBI-GeneID:
134310600
NCBI-ProteinID:
XP_062848302
LinkDB
All DBs
Position
3:52059990..52092525
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AA seq
805 aa
AA seq
DB search
MASFPDSEVQTCPLCKELCGSSAPISSSSSTSSSSSQTSNSSTTSSTRRLHVLPCLHAFC
RPCLESLRSNGDPLKLRCPTCDQKVPMSESGVDALPSSNFLFSSLLDVVVSTDDPGTGGC
RGNGGLLRAQPSLTDPQCSSCDEGNCASSHCLDCQEYLCENCVRAHQRVRLTKDHFIESL
HMGPRTGGPCTQNSLSQAFHNFSLLPVFQDRVDYCQQHDNAVLRFFCESCSVPICRECSV
GRHVGHSVSYLQDVLHDSRALTIQLLADIQQGRQAVQLSIEKAQAIAEQVEMKAKVVQSE
VKTTTLRHKKTLEERECELLWKVEKIRQVKAKSLYLQVEKLHQNLTKLDSTIATVTKVLE
DGRSIDVLLAREHMLNQLQELKSLRCILPPQEDDRIVFTPPDQALLIAIQSMGLISSGAF
ASATKAHGEGLKRALQGKLACFTVVAYDHDGEPRLSGGDGVSVVLMNPEGNLFSADVSDN
QDGTYAVSYLPKGEGEHLLSVLICNQHIEGSPFKVMVKSGRSYGGIGLPMASFGGEGDGD
GQLCRPWGICVDKEGYVIVADRSNNRIQIFKPGGTFHHKFGTLGSRPGQFDRPAGVTCDS
QRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNPEGKILVSDTRNHR
VQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFTQEGHLVVTDFNNHRLLVIRPDCQSARF
LGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTQGSGFGQMDR
PSGIAVTPDGMIVAVDFGNNRILIF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcccagattcggaggtgcagacgtgcccgctgtgtaaggagctgtgcggc
tcctcagctccgatctcctccagctcatctacctcgtcgtcgtcgtcgcagacctccaac
tcgtccactacctcgtccacacgcaggctgcacgtcctgccgtgtctgcacgccttctgc
aggccctgcctggagagcctgaggagcaacggcgacccccttaaactccgctgccccacc
tgcgaccagaaggtgcccatgtccgagtcgggcgtggacgcgctgccgtcgtccaacttc
ctcttcagcagcttgctggacgtggtggtgtccacggatgatcctggcacggggggctgc
aggggtaacggggggctcctccgcgctcagccctcgctgacagatccgcagtgcagctcc
tgcgacgagggcaactgtgccagctcgcactgtctggactgtcaggagtacctgtgtgag
aactgcgtgagggcccatcagcgagtccgcctcaccaaagaccacttcatcgagagtctg
cacatggggccacgcaccgggggcccctgcacccagaacagcctctcccaggctttccac
aacttttccttgctgcccgttttccaggaccgtgtggattactgtcagcagcacgacaac
gcggtgctgcgttttttttgtgagagctgctccgtacccatctgtagggagtgcagcgtg
ggacgccacgtgggccacagcgtctcctacctgcaggacgtgctgcacgactccagagcg
ctgaccatccagctgctggccgacatacagcagggacgacaggccgtacagctgagtatt
gagaaagctcaagccatcgctgaacaggtggaaatgaaggccaaggtggtgcagtcggag
gtgaagaccaccacgctgcggcacaaaaaaaccctggaggagcgcgagtgtgaacttcta
tggaaggtggagaagattcggcaggtgaaggccaagtcgctgtaccttcaggtggagaag
ttacaccagaacctgaccaagctggacagcacgatagccacggtaaccaaagtgctggag
gacggccgcagcatcgacgtcctgctggcgcgcgagcacatgctgaaccagctgcaggag
ctcaaatcgctgcgctgcatcctaccgccgcaggaggacgaccgtatcgtcttcacgcct
ccggatcaggccctgctgatcgccatccagtccatgggtctgataagcagtggagccttc
gcgtcggccaccaaagcccacggagagggcctcaagagggcgctgcaggggaaactggcc
tgctttacagtggtggcatacgaccacgatggagaaccgcgcctgtccgggggtgatggc
gtatctgtggtcctgatgaatcccgaaggaaacctgttcagcgcagacgtctctgacaac
caagacggcacgtacgcggtgagctacctgcccaagggtgaaggtgagcatctgctctct
gtgcttatctgcaaccagcacattgagggaagtccattcaaagttatggtcaaatccggg
cgcagctatggaggcatcggcctccctatggcatcatttggcggggagggtgatggcgat
gggcagctgtgtcgaccctggggtatctgtgtggataaggaaggctacgtcatcgttgcc
gaccggagcaacaatcgcatacagatctttaagccaggtggcacctttcaccacaagttt
ggtactttgggctcgcggcctggccagtttgaccgaccggcaggggtcacctgcgacagc
cagaggagaatcatcgtggctgataaggacaatcaccgcatccagatcttcaccttcgag
ggccagttcctcctcaaattcggcgaaaagggaaccaaaaacgggcagttcaactacccc
tgggacgtggccgtcaaccccgaggggaagatcctggtctcggatacgcgcaaccaccga
gtacagctgttcggccccgacgggacgttcctcaacaagtacgggttcgaaggcgccctc
tggaagcattttgactccccccggggcgtcgccttcactcaagagggtcacctggtggtg
accgacttcaacaatcatcgcttgctggtcatcaggcccgactgccagtcggctcgcttc
ctgggctccgaggggacggggaacgggcagtttctgcgtccgcagggcgtggccgtggac
caggaggatcgcatcatcgtagcagactcgcgcaaccatcgaattcaggtgttcgaaccc
aacggcaacttcttatgcaagtttgggactcaaggtagcggcttcgggcagatggatcgc
ccatcgggtatagccgttacccctgacggaatgattgtagccgttgactttggtaacaat
cgaatcctcatcttctga
DBGET
integrated database retrieval system
