Trichomycterus rosablanca: 134310623
Help
Entry
134310623 CDS
T09921
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134310623 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134310623 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
EzrA
EGF_Teneurin
BNR_6
Laminin_I
Motif
Other DBs
NCBI-GeneID:
134310623
NCBI-ProteinID:
XP_062848328
LinkDB
All DBs
Position
1:36957117..36990148
Genome browser
AA seq
1783 aa
AA seq
DB search
MILHLAALFLLGACAMAELPERGDVCTEGSCYPATGDLLIGRAHQLTATSTCGLDKAEPF
CIVSHLQEEKKCFACDSRGSYNETAHTTSHRIENVVTTFVNRLKTWWQSENGMENVTIQL
NLEAEFHFTHLIMTFKTFRPASMVIERSSDFGKTWQVYRSFAYDCESSFPTVSQGPMKKV
DDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTLGD
NLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDAGGVVVDGMVHGHCVCNHNTM
GLNCERCQDFYHDLPWKPAEGRNTNACKKCNCNQHSNACHFDMAVYRASGNVSGGVCEDC
QHNTMGHQCEQCKPFFFQHPERDIRDPNICESCDCDRVGSLNGGICDARTDVSLGLIAGQ
CRCKPNVEGERCDQCKQGHYGLSDYPLGCKPCTCNSVGTIPGGSPCDTVTGNCYCKRLVM
GRDCDQCLPQHWGLSNDIDGCRPCDCDAGGALNNNCNPETGFCQCREHMSGRRCDQVESG
FYFIALDHYVYEAEDAKFGPGVTVVQRPYPQDRTPTWTGVGFVNVPEGAYLEFSIDNIPY
SMDYDVLIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQMVSLHPGSRYVVL
PRPVCFEDGLNYTVRLSLPRYSTSSDIQSPYTLIDSLVLMPHCRNMDIFSGFGSEGSDLV
TNSAWDTFQRYRCLENSQAVVKTPMPDICKNYIFSVSALLHQGAKACQCDPQGSLSTVCD
PNGGQCQCRLNVVGRNCDRCAPATFQFGPQGCRPCECNPQGSVHAFCSEATGQCVCIPGA
HGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPHTGQCLHCRDHTNGHNCERCLNGYYGDP
VLGSGDHCRPCMCPDGPSSSRQFAGMCYKNDDSLQVFCVCNQGYKGARCDECAPGYYGNP
HEAGGECRPCQCNNNINMVDPGSCDALTGVCLKCLYHTKGESCSHCKLGYYGDALSQNCR
RCVCNHMGTMQETCPSMGDCHCNQNNGQCQCLPNVIGQHCDLCAPDTWNMASGKGCEACD
CDPNHSFSSSCNEISGHCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRRIAEEQCN
KVTGHCVCVEGVSGPRCDTCARGYFGEFPHCERCHQCFAEWDVIIGDLTNQTHRLVQKVN
TIKSNGITGPYQNTINNVERSANSIRELLAQNPATQPLTEIQSLMEQAIALMSEMNDKLN
QTDELMSQISAENNNTDSKREVLTEEAQKLQRTVKELQDQVEFIKNSDVQGASESVNRYL
KMSEAAEARVNASVSDPNSLVEQSASLRLATETMMNGTKEEFDRKQNEHSVALDNLAGQL
ETLDLSELSEQTCGSPAGSEACADSPCGGLGCLDAEGNRKCGGEGCDGLYTLANNAWQKA
KDFDQDITDAMEEVEKLSKMVSEAKVKADEAKLNAKEVLQKANETKQRVDNSNEELRMLI
KQIRDFLTQEGADLESIEAVANEVLQMQMPTTPAQLQNLTEEIRERVASLSDVEDILNQS
AADIEKAEHLLEQAQRARKEASDVRSTAEMVQKALDHADKAQSIVTEALKQASTDIKGTQ
NLLVSVESETADSEFKLSNATQRLLQLEKDVALLKEKANNISATAEKTENSTDRVNEMAE
QIKKDMDTELKDKYGTVEELITLKAQGVADAKKRAEMLQQEAKDLLLQASDKLQLLKDLE
KSYDKNQKTLEDKANQLVNLEKAVKELLQEISQKASVYSTCLF
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgatattacatctcgcagccctgttcctcctaggggcctgcgccatggcagaattgcca
gagcggggggatgtgtgcactgagggaagctgttaccctgctacaggagatctgctaatc
ggccgagcccatcaactgactgccacctccacatgtggcctagacaaagctgagccattc
tgcatcgtcagtcacttacaggaagagaagaagtgctttgcgtgtgattcaagggggtca
tacaatgagacagcacatacaaccagccacagaatcgaaaatgtagtgaccacgtttgtt
aacagacttaagacttggtggcagtcagaaaatgggatggagaatgtgaccatccagctg
aacctagaggcagagttccacttcactcatctcatcatgacctttaagacattccgacca
gcttccatggtgatagagcgctcctcagattttggaaagacctggcaagtatatcgttcc
tttgcctatgactgcgagtcttccttccccacagtctctcagggccccatgaaaaaggtg
gatgatgttatttgtgactctcgctattctgacattgagccatctactgagggcgaggtc
atttttcgagtactggatccagcatttaggattgatgatccttacagccctaggatccaa
aatatgctaaagatcactaacctgcgagtaaaattcactaagttgcacactctgggcgat
aacctgctggactcacgtattgagataaaagagaagtactactatgccatctatgacatg
gtggtgaggggtaactgcttctgctatggccacgcgtctgagtgtgcaccagttgatgca
ggaggagtggtggtggatggaatggttcatggccactgtgtgtgtaatcacaacaccatg
ggtctaaactgtgagcgctgtcaggatttctaccatgacctgccctggaagcctgcagag
ggacgcaacaccaacgcctgcaaaaagtgcaactgtaatcaacacagtaatgcttgccac
tttgacatggctgtgtaccgggcctcgggcaacgttagtggaggagtgtgtgaagactgc
cagcacaacaccatgggccaccaatgcgagcaatgcaagcccttcttcttccagcatcct
gagagggatattcgcgaccctaacatctgcgagtcctgtgactgtgatcgtgttggctct
ctaaatggaggaatctgtgatgcacgaacagatgtctcacttggactgatcgcaggccag
tgtcgctgcaagcccaatgtggaaggtgaacgctgtgaccagtgtaaacaaggccattat
ggcctcagtgattaccctctgggatgtaaaccatgcacctgtaactctgtgggtacaatt
cctggaggaagtccttgtgacacagttacaggaaactgctactgtaaacgcttggtcatg
ggaagagattgtgaccagtgcttgcctcagcactgggggctcagcaatgacatagacggc
tgcagaccatgtgactgtgatgccggaggtgctctgaataacaactgtaatccagaaaca
gggttctgtcagtgtcgggagcacatgtctggcagacgctgtgatcaggtggagtcgggt
ttttactttattgctttggaccactacgtttatgaggcagaagatgctaaatttggaccg
ggtgttacagttgtgcagagaccgtacccccaggaccgcaccccaacctggacgggtgtt
ggctttgttaacgttccagaaggggcttatctagagttcagcattgacaatattccctat
tccatggactatgatgtgcttattcgctatgaaccccagcttccggagcagtgggaagag
gtactgatgactgttattaggcctcgtgtcatcactgctgacagccgctgtgccaacacc
atgccagatgacgacaaccaaatggtatccctgcatcctggctctagatatgtggtgttg
cccaggccagtatgttttgaggatggactgaattatactgttcgcctgagtcttcctcgc
tactccaccagcagtgacatccagtccccatacactctcattgactcgctggtgctgatg
ccccactgtaggaatatggatatcttctctggttttggatcagagggcagtgacctagtg
accaacagtgcatgggacacctttcagcgctaccgctgcttagagaacagccaagctgta
gtgaagaccccaatgcctgacatctgcaagaactacatcttcagtgtgtctgcactactg
caccagggagctaaagcctgtcagtgtgaccctcaaggttctctcagtacggtgtgtgac
ccgaatggtggacagtgtcagtgtaggcttaatgtggtgggcagaaactgtgataggtgt
gctcctgctacctttcagttcggacctcaaggctgcagaccttgtgagtgcaaccctcag
ggttcagtacatgcattctgctctgaggctactggtcagtgtgtatgtattcctggagca
catggacgtcagtgtgatcgctgtcttcctggacattggggatttcctaactgccgtccc
tgtacctgtaacggtcatgcagaacagtgtgatcctcatactggccaatgcttacactgc
agggatcacaccaatggccacaactgtgaaaggtgcttgaatggttattatggtgaccca
gttctgggttctggggaccactgccgtccttgcatgtgtccagatggtccaagcagcagc
cggcaatttgctgggatgtgctataagaatgatgactcactgcaggtgttctgtgtctgc
aatcagggctataaaggtgcaaggtgtgatgagtgtgctccaggttactacggaaatcct
catgaggctggtggagagtgtcgtccatgccagtgcaataataacatcaacatggtggac
ccaggctcctgtgatgcgctgactggtgtctgccttaaatgcctgtaccacaccaagggc
gagagctgcagccattgcaaacttggttattacggtgatgccctcagccagaactgcaga
agatgtgtgtgtaaccacatgggcacgatgcaagagacctgtccttctatgggtgactgc
cactgtaaccagaacaacgggcagtgccagtgccttcctaacgtgatagggcagcactgc
gacctgtgtgccccagatacctggaacatggctagcggaaaaggctgtgaggcctgtgat
tgtgaccccaaccattctttcagctcctcctgcaatgagataagtggccattgttcatgt
aagcctggttttggagggcggacatgcagggagtgcagagaactgttttggggtaaccca
gaggtcaaatgccatgcgtgtgactgtgaccctagaagaattgcagaggagcagtgtaac
aaagtcacaggccactgtgtgtgtgtggagggtgtgtccggcccccgctgcgatacctgt
gctcgaggatatttcggagaatttccccactgtgagcgctgccaccagtgctttgctgaa
tgggatgtgataataggggacctcaccaatcagacccacagattggtgcagaaagtcaac
actattaaatccaatggcatcacaggaccctatcagaacactatcaacaatgtggagagg
agtgccaactccatccgtgaacttctggcacagaaccctgccactcagcctctcacggag
atccaaagcctgatggagcaagccatagctttgatgtctgaaatgaatgacaagttgaac
cagacggatgagcttatgtctcagatctctgctgaaaacaacaatactgactcaaagcgg
gaggtgcttactgaggaggctcagaaactgcagcggactgtcaaagagctgcaagaccaa
gttgagtttataaagaactcagatgtgcaaggagcatcagagagtgtaaacagatacttg
aaaatgtcggaagcagcagaggctcgcgtgaatgcctctgtcagcgacccaaacagcctg
gtggagcagtctgcctcactgcgcttggcaactgagaccatgatgaatggcactaaagag
gagtttgacagaaagcaaaatgagcattccgtagctctggacaatctggctggccaactt
gagacccttgatctgtctgaacttagcgagcagacctgtggcagccctgctggctctgaa
gcctgcgctgactctccatgtggaggcctgggctgtttggatgctgaaggaaacagaaag
tgtggaggagagggatgtgatggcctctacacgttggccaataatgcttggcagaaagcc
aaagactttgaccaggatatcactgatgccatggaagaagtggaaaagctttctaagatg
gtttcagaagcaaaggttaaagcggatgaggccaagctgaacgctaaagaggtgctgcag
aaggccaacgaaaccaagcagcgtgtggacaacagcaacgaggagctgcgcatgctcatc
aaacagattcgagactttcttactcaagaaggagcagatctggagagcattgaggctgta
gctaacgaggtgcttcagatgcagatgcccaccacaccggcacaactgcagaacctgaca
gaggagatcagagagcgcgtagctagcctgtctgatgtggaggacatcctaaaccagagc
gctgccgatatcgaaaaagccgagcacctgctggagcaggcccaaagagccaggaaggag
gcatcagatgtgaggagcacagcagagatggtgcagaaagctctggatcatgcagataag
gcacagtctattgtaactgaagccttaaagcaagcatccacagacatcaagggaacccag
aatctgctcgtgtctgtggagtcagagacggcagattccgagttcaagctgagcaatgct
acccagaggctgctgcagctagagaaggatgtggctctgctgaaagaaaaagccaacaac
atctccgctactgctgaaaagactgagaatagcacggatagagtcaacgagatggcagag
caaatcaaaaaggatatggatacagagctgaaagacaagtatggtactgtggaggagctg
atcactcttaaggctcaaggtgtagcagatgccaagaaaagagctgagatgcttcaacag
gaagcaaaagacctcctgctgcaagctagtgacaaactacaactccttaaagatctggag
aaatcatacgataaaaaccagaagacactggaggacaaagctaaccagctggttaacctg
gagaaagctgtgaaagagctacttcaagaaattagccagaaggccagtgtatacagcacc
tgcctgttttaa
DBGET
integrated database retrieval system