Trichomycterus rosablanca: 134310686
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Entry
134310686 CDS
T09921
Symbol
grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134310686 (grik3)
04082 Neuroactive ligand signaling
134310686 (grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134310686 (grik3)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Glutamate (ionotropic)
134310686 (grik3)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
134310686
NCBI-ProteinID:
XP_062848384
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All DBs
Position
3:complement(46553627..46682295)
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AA seq
1040 aa
AA seq
DB search
MVRPPDSLGLLMKKRVDLLRAIDAENRLTQLSHRGTRERLQFSPGHGEASWDAFAGIYFD
KARRAEDRGGGGWNGMGGGIFEQTEGPVSLVSAEELAFKFAVNNINRNRTLLPNTTLTYD
IQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRWKHHPM
DNRDTFYANLYPDYSSLSYAILDLVQFLKWKTATVVYDDSTGLIRLQELIMAPSRYNIRL
KIRQLPLDSTDTRPLLKEMKRSREFRIIFDCSHTMAAQILKQAQMMGMMTEYYHYIFTTL
DLMAINLEPYRFCGVNMTGFRILNVDNPQVASVVEKWSTEKHITPKPDSGLLEGIMTTDA
ALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRFMSFIKESHWDGLTGRLCFNKT
TGLRTDFDLDIVSLKEDGLEKVGKWSASGGLNITELPKRNGMNITDSLANRSLVITTILE
EPYVMLKKSDRALVGNERFEGFCIDLLKELAGILGFSFEIRLVPDGKYGFQDDKGQWNGI
IRELIEHRADLAVAPLTITFMREKVIDFSKPFLNTGISIVYRRPNNTNSGFFSFLKPMTP
DIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPSSDVVENNFTLLNSFWFGVGSLMQ
QGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIE
YGVVKDGATMSFFKKSRVSTFEKMWAFMSSKQSTSLVKSIEDGIQRVLKSDYALLMESTT
IEYVTRRNCNLTQIGGIIDSKGYGIGTPKGSPYRDKITIAILSLLEDGRLHIIKEKWWSG
SNCQEDERYETGPMGIQDLGGIFIVLASGLVLSIFVAIGEFIYKLRKTAEREPVFLQCGD
GRDQTVVHVREKSEAQATSCSSHSEDGRRDQHAFLQRAPAAGKGQRERERELQQQHCNDA
RVSMTCLGDGHLRHLPSTVPESVDFGSEMITAFTLNRRDTRNHTTKQNGGTSSNTGNDHA
LKPMYPTMPLREGGRSVSFL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggttcggcctccagactctctcgggctcttaatgaaaaagagagtggacttgttgcga
gccatcgatgcagaaaacagattaactcagctcagccacagaggcacaagagagcgtctt
caattcagccccggccacggagaagccagctgggatgcattcgctggcatctattttgac
aaggcacggcgagctgaagacaggggtgggggaggatggaacgggatgggaggagggatt
tttgaacaaaccgaggggcctgtgtcgctcgtcagtgctgaagagttggccttcaaattt
gccgtcaataacatcaacagaaacaggacgttactgccgaacacgaccttaacatacgac
atccagcggattaatatctatgatagctttgaggcctcaagaaaagcttgtgaccagctg
tctttaggtgttgttgccatattcgggccatctcacagctcatcatcaaatgcggtacag
tcgatctgcaatgcattggaggtcccacacatccaggtgcggtggaaacatcaccccatg
gacaacagggatacattttacgccaacctgtacccagattactcctccctcagctatgcc
atcctggacttggttcagttcctcaaatggaaaacagctactgtggtgtacgacgatagc
actggtctgattcgactgcaggagctgattatggctccttccaggtacaacatcaggctg
aagatccgccagctccctctggatagtaccgacacccgacccctgctgaaggagatgaag
aggagccgagagtttcggatcatcttcgactgtagtcacaccatggctgcacagattctg
aaacaggctcagatgatgggaatgatgacggagtactaccactacatcttcaccactctg
gatcttatggctatcaatctggagccttaccgattctgtggtgttaatatgaccggcttc
cgcatcctgaatgtggataatccccaggtggcttctgttgtggagaaatggtctacagaa
aaacatatcacaccaaaacctgattctggtcttctggaaggaatcatgacgacagatgct
gctctgacgtatgacgcagtccacattgtgtccgtctcctaccagcacgcgccgcagatg
acagtcaactcgctacagtgccaccgccacaagccctggaggttcggcggccgcttcatg
agctttattaaggagtctcactgggatggcctaactggacgtttgtgttttaacaaaacc
acaggcctgagaactgatttcgacctggacattgttagcttaaaggaagatggtctggaa
aaggtgggaaagtggagtgcatcgggaggcctgaacatcacagaactccccaagcgaaat
ggcatgaacatcaccgactcgctcgccaaccgctctctggtcatcactactatactggag
gagccgtatgtcatgcttaaaaagtctgacagggcacttgtcggaaatgaacgtttcgaa
ggcttttgcattgacctgctgaaggaactggctggcattctgggcttctccttcgagatc
cgtttggttccagacgggaaatatggcttccaggatgacaagggccagtggaatggaatt
attcgggagctcattgagcatagagcagatttggctgtagcccccctcaccatcaccttt
atgagagagaaagtcatcgatttctccaagccctttctaaacactgggatcagcattgtg
tatcgccgtcctaacaacaccaacagtggcttcttctccttcctaaagcccatgacccct
gacatatgggtctacattctactggcctacctgggtgttagctgtgttttatttgtcatt
gccagatttagcccttatgagtggtacgatgcccatccctgtaacccaagctctgatgtg
gtggagaacaacttcacgctcctcaacagcttctggttcggcgtgggctccctcatgcag
caaggttctgagctgatgcccaaagctctttctacacggatcattgggggaatctggtgg
ttctttaccctcatcattatctcctcctacacggccaatctggctgcattcctcactgtg
gagagaatggattctcccatagactcggctgatgacctggcaaaacagaccaaaattgag
tacggtgtggtgaaagatggtgcgacgatgtcatttttcaagaaatctagagtttcaaca
tttgagaagatgtgggccttcatgagcagcaaacaaagcacgtcactggtcaagtcaatt
gaagatggaattcaaagggttttaaaatcagactacgccctgctcatggaatctactact
attgaatatgtgactcgcagaaactgtaacctgacccagattggaggcattattgacagc
aagggttacggcattggtacccccaaaggctcaccatacagggacaaaatcactatagcc
attctgagcctgctggaggatggacgcctgcacattataaaggagaaatggtggagtggg
agcaattgtcaggaagatgaacgctatgaaaccggaccaatgggcatccaggacctgggt
ggaatctttattgtgttggcttcaggtctagtgctgtctatctttgtggctatcggggag
tttatctacaaacttcggaagactgcagagcgtgaaccggtctttctgcagtgcggtgat
ggaagagatcagacagtcgttcacgtgcgagaaaagagtgaagcacaagcgacgtcatgc
tccagccacagcgaagacggacgccgtgatcaacatgcattccttcaacgagcgccggct
gccgggaaaggacagcgtgagcgtgagcgtgagctgcagcagcagcactgcaatgacgcc
cgtgtttccatgacgtgcctgggggacggtcacctgaggcacctgcccagcactgtgccc
gagagcgtggacttcggctcagagatgatcacagcattcaccctcaaccgcagagacacc
cgcaatcacacgaccaagcagaacggcggcacgagcagcaacacaggtaacgaccacgcc
ctcaaacccatgtatcccacaatgcccctgagagagggaggtcgctctgtgtccttcctc
tga
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