Trichomycterus rosablanca: 134310746
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Entry
134310746 CDS
T09921
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134310746
Membrane trafficking [BR:
trn04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134310746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
VanY
Motif
Other DBs
NCBI-GeneID:
134310746
NCBI-ProteinID:
XP_062848457
LinkDB
All DBs
Position
3:1728940..1772925
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AA seq
1490 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAGDSAPLDEECQQRGGRGVEPITDLAVIARGLGEEVPEGFTC
IEKTPSGHSAELSAGLINNPHMFLCYRRGHDKPPILELGVLYEGKETLKQGWHLIETTPY
SRCASLSSGGPAAHRTFLMYRRAPDSQALNTPGVTDISLLMPSKGEVAQHTFCRVDKNLN
TGMWGPALYLCYKRAVAKANALVYEAGLISRYPEEDLESFPLPDSVSVFCLPMGVTVESW
PLDTKYQLPVFSTFVLTSASGDKVYGAAIQFYEAYPRAALSERQLVRLGLVSVVDRRPIT
SRTVQVKKSVCVLSHWPFFTVFQKFLTFIYRYSISGPHVLPIEKHISSFMHNVPFPSPQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASYLKLLQNLGAENTCTLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMTFPLRWPCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPAD
VVCVDLDTNTIFQSEDKKPLSWRSLPRKHAKVLLHSLSSLHKTLEKICTPGQEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSYLLPITQAPSDRTTNCSNLFNLQGF
LKSRDRTQQKFYIQLTKTQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEKPEDVRLVD
LDETHSGEHTVFIMPPEEPQEPDGSECPAPYIYETFPILQPEMFDRPHDQLRTPAKGSAP
SSPAPRRTKQEIKLAQKCAQKYSTVPDMWSKCLLGHCYGLWFIYLPTFVRAESNKVRALH
TAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYY
NKAVFESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRRQKSDSFSSRKGDSNSLRPHS
SLTRQTSWSGLSESSSHESLTGPITKSNSLSSVRAHKSKTSDETPAQTATADDAASRKPP
SGRRDTATPSPGPAAERILVRRSQVCLSTFYTDCAETVPESKSRPAERGSRSVEQRETLN
RKALDENSNNVPSPSRRLAGKLQQLLTLTPTRHRNSSRRAASVDERRPAANGPSRKTPEQ
RQWRKSQVAETLLRAKERLYNANSESSLSMGSDIDLTEPSNSTFTLRKSWDSAQEGAGLE
VMMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSACPFCTATFVPLLNAEICDKGPVIGH
ERANWNLEDEVESAMRPPSAQEGFLHHLYNGVKEHDSGSETSGYSESSGSTNTYSASSGG
GPQVTVAYLSPLVLRKELESLLENEGESVLSQDQLLDSHSILFWNLVWYFARLGLPSNLL
QLVRASPLAVQISPTSENTSVRVRLLWDTLTPDMEHWPPLYILWRIHSNVPMRNYAWRRH
NHPFTLSFLEEVLRWVGMNEVHKAVTLLLDTVGKKPGSPRIQRSVYREFLFLTLAAMGKD
HVVAFDKRYKAAYARLSGSLGKEELRRRRALPPSAKAVDCRRCFLVPLEC
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggagaaatgtcctcagttggtggattacttcgtggtggcggggctggccggc
gactccgcccccctggacgaggaatgccagcagaggggcggccgaggggtggagcccatc
accgacctggccgtgatcgcccgcggcctcggggaggaggtgcccgagggcttcacgtgc
atcgagaagacgccgtcgggccactcggccgaactcagcgccggactcatcaacaacccg
cacatgttcctgtgctaccggcgcggccacgacaaaccgcccatcctggagctcggcgtc
ctgtacgagggtaaggagaccctgaagcagggttggcacctgatcgagaccacgccctac
agtcgctgtgccagcctgagctcaggaggccccgccgcccacagaaccttcctcatgtac
cgccgcgcgcccgactctcaggccctcaacacgccgggcgtgaccgacatctcgctcctc
atgcccagcaagggggaggtggctcaacacaccttctgcagggtggacaagaacctcaac
accggcatgtggggtccggcgttgtacctgtgctataagcgggccgtagccaaagccaat
gccctggtgtacgaggcaggtctgatcagccgttaccctgaggaggacctggagtcgttc
ccgctgccagattcggtctcggtcttctgtctgcccatgggggtgacggtggagagctgg
ccgctcgacaccaaataccagctgcccgtgttctccaccttcgtcctgaccagcgcgtcc
ggagacaaggtgtacggcgccgccatccagttctacgaggcgtacccgcgggcggccctg
tccgagaggcagctggtgcgcctgggcctggtcagcgtggtggaccgccggcccatcacc
agccgcacggtgcaggtgaagaagagcgtgtgcgtgctctcacactggccgttcttcacc
gtcttccagaagtttctcaccttcatctaccggtactccatctccgggccgcacgtgctg
cccattgagaagcacatctccagcttcatgcacaacgtgccgttcccttcacctcagcgc
ccgcgcatcctggtacagctgtctccgtacgacaacctcctgctgtgccagccggtgtcc
tcgcccttaccgctgagtggtgccagctatttaaagctgctgcagaacctcggggcggag
aacacgtgcaccctgctgctggccgtgctgacggagcacaaactgctgctgcactcgctc
cggccggacgtgctcacgtcggtcagcgaggccctggtgtcgatgacgtttcctctgcgc
tggccctgtccgtacattccactctgccctctgcgcctggcggacgtgctgtgtgccccc
atgcccttcatcgtgggagtccattccagctacttcgacctgtacgacccccctgcggat
gtggtgtgtgtggacctcgacaccaacactattttccaatcagaagataagaagcccttg
tcctggagatctttaccgaggaaacacgccaaagtcctgctccactccctcagcagcctg
cacaagaccctggagaagatctgtacccccggccaggaggaggccaccctggagttctta
ctgaccgattacgatctgatctacgggcgtcagaagcagcttgagctggagatccaggag
gccttcctgcgcttcatgagctgcctgctgaggggatatcgctcgtacctgctgcccatc
acccaggctccgtcggatagaaccaccaactgcagcaatctcttcaacctgcagggtttc
ctgaagtcgagggaccggacgcagcagaagttctacatccagctgaccaagactcagatg
ttcacgcagttcatagaggagtgttcgttcgtcagtgaccgacacgcctgcctggagttt
ttcgacgagtgtgtacagaaggtggacgtggagaagcccgaggacgtgcggctggtcgac
ctcgatgagacccacagcggggagcacacggtcttcatcatgccgccggaggagcctcaa
gagcccgacggttcggagtgtccggcaccgtacatctacgagacgtttcctattctccag
cctgagatgtttgaccgcccgcatgaccagctccgtacccctgccaagggcagcgccccc
agcagccccgcccctcgccgtaccaagcaggagatcaagctggcacagaagtgcgcccag
aagtactccaccgtaccggacatgtggtccaagtgtctgctgggtcactgctacggcctg
tggttcatttacctgcccacgttcgtccgggccgagagcaacaaggtccgggcgctgcac
acggcctacgaggtgctcaaacacatggagacgcgcaaggtggtgctgcccgacgaggtg
tgttaccggatcctgatgcagctctgtgggcagtatggtcagcctgtgctcgctgtccga
gttctgctggagatgaagaaggccggaataactcccaacaccatcacgtacggctattat
aataaggccgtgttcgagagcaagtggccgtccaccaatcagggagggcgcctccgctgg
gccaaactgcgtaacgtcctgctggccgtggcgcaattcaggcagccgatcaagcgcagg
cagaagagcgactcgttcagctcgagaaaaggcgactccaactctctccgccctcactcc
tcccttacacgccagaccagttggagcggcttgagcgaaagttcgagccacgaatcgctg
accggacccataaccaagagcaacagtctgagcagcgtccgagctcacaagtccaagacg
tcggacgaaaccccggcgcaaaccgcgaccgccgatgacgccgcctcccgcaaacctccc
agcggccgtcgggacacggccacgccctccccggggccggccgcagaacggattctggtg
cggcggagccaggtgtgcctgtccacgttttacaccgactgcgccgagaccgtcccggag
agcaagtcccgaccggccgagagaggaagcaggtctgtggagcagcgggagacgctgaat
cgtaaggcgctggacgagaactccaacaacgtgccgtctccgagtcgcaggctggccggc
aaactgcagcagctgctcacgctcacgcccacgcgccaccgcaactcgtcccgccgggcc
gccagcgtggacgagcggagacccgccgccaacggcccctcccgcaagacgcccgagcag
aggcagtggcgcaagtcgcaggtggccgagaccctgctgagggccaaggagcgcctctac
aacgccaactctgagagctcgttgtccatgggaagcgacattgacctgaccgagccttcg
aattccacatttacacttcggaagtcgtgggattctgcacaggaaggggcggggcttgag
gtgatgatgtccagctgctctctctgccggagctgcaactcgctggtctacgacgaggag
atcatggccggctggacgtccgacgactccaacctcaactccgcctgccccttctgcacc
gccaccttcgtaccgctgctcaacgccgagatctgcgacaaggggcccgtcatcggtcac
gagcgcgccaactggaacctggaggacgaggtggagagtgccatgaggccacctagtgcg
caggagggcttcctgcaccacctgtacaacggcgtgaaggagcacgactccgggtccgag
accagcgggtactccgagagcagcggcagcaccaacacctacagcgcgtcctcgggaggc
ggccctcaggtgaccgtggcctacctgagtcctctggtgctgaggaaggagctggagagc
ttgctggagaacgagggggagagcgttctgtctcaggatcagctgctggacagccactcc
atcctcttctggaatctggtgtggtacttcgctcgccttggtctcccgagcaacctgctg
cagctggtgcgggcgtcgccgctcgccgtgcagatctcaccgacctcggagaacacctca
gtaagggttcggttactgtgggacaccttgacgcccgatatggaacactggcccccgctg
tacatactctggaggatacacagtaacgtcccgatgcggaactacgcgtggcgcagacac
aaccaccccttcacgctaagcttcctggaggaggtcctgcgctgggtgggcatgaacgag
gtgcacaaggccgtcacgcttcttctggataccgtcggcaagaaacccggatctcctcga
atacagaggagcgtgtacagggaatttctctttcttactctggctgctatgggaaaagat
cacgtcgtcgccttcgataagaggtataaggccgcctacgccagactgagcggctctctg
ggcaaggaggagctcaggaggaggagagctctgccacccagcgccaaagccgtggactgc
aggcgctgcttcctggtgccgctggagtgctga
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