Trichomycterus rosablanca: 134310790
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Entry
134310790 CDS
T09921
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134310790 (lingo4b)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134310790 (lingo4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRRNT
V-set
LRR_9
LRR_EndoS
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
134310790
NCBI-ProteinID:
XP_062848540
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All DBs
Position
3:complement(3988980..3990791)
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AA seq
603 aa
AA seq
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MCGQQWMWAFVLLCYVRLSAADRLWPCPQKCICRQDSLAVNCSSKQLTGVPEGLPINTKR
LYLSGNHLKTLSRRQFFALSQLEELDLSENMISMIEVEAFQGLKNLRYLRIKNNHLKIIP
VGVFSGLPNLLKLDISKNEILVFLDNTFQEMENLQEMNARENDLVFISQRAFVGLQSLQE
LYVDHSNLTSIPTEAFSQLQSLTKLHLRRLTINVLHNNAFRRLNQLRTLQIIQWPSLDTL
NSNSLIGLNLTTLVISYCNLSAIPYASLRHLVYLHYLDLSYNPITSVKSGLLGELLRLQE
FHLVGGKLLRIESGAFRGLVYFKLLNVTSNRLTTLEESAFHSVGNLQTLRLDRNPLTCDC
RLLWVVRRRLRLNFDNRQPSCTAPDRVRKREFRDFSEAELSKLFVCRPAYIKNQKPQEAS
VDEGANVQFECKAEGHPPPFITWLSPKQTSFNSMGRIRVLANGSLEVRYAQVQDTGTYLC
VAGNAAGKDTISASLQVQHFSQNYTASYLFDERWVETSLPPSTNSSLQGSNLYPFDAKTL
VIATTMGFLSFLSSVAICFVFMFIWSQSQGQIKHTATIDFVPRASVKGGGDGGDSGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtcagcagtggatgtgggcttttgtgctgctctgctatgtgcgcttatcagca
gctgaccgcctttggccatgtccccagaagtgtatttgtcgacaggactcgctagcggtc
aactgctcttcaaaacagctaacgggtgttcctgaaggcctgcccatcaataccaagcgg
ctatacctctccggcaaccatctgaagacattgagtcggcgacagttcttcgcattatct
cagctggaagagctggaccttagtgagaacatgatatctatgatcgaagtggaggcattt
caaggtcttaaaaatttacgctacctacgaataaaaaacaaccacctaaagatcatccca
gttggcgtcttctctggtctgccgaaccttctgaagcttgacatcagcaagaacgagata
ctcgtttttttggacaacacatttcaggaaatggaaaaccttcaggaaatgaacgctaga
gagaatgatctggtttttatctcacagagagcttttgtaggcctgcagagcttacaggag
ctgtatgtggaccatagtaacctaacatccatccctactgaagcattttcacagctccaa
agtctgaccaaactgcatttgcgaagacttaccattaacgtgttgcacaacaatgccttt
cgtcggctgaaccagctgcgcacgctgcagataattcagtggccctcgctggatacttta
aacagcaacagccttattggtctaaacctcactacacttgttatcagctattgcaatctg
agtgccataccgtatgcctccctgcgccatttggtgtatctacactacttagatctgtcg
tacaatccgattacatccgtaaagagcggcctgttaggggaattactccggcttcaggag
ttccacctggtgggtggaaaactgctccgcatcgagtcaggtgcttttaggggtctggtc
tactttaagttgctgaatgtaacctcaaaccgacttaccaccctagaagagagtgccttt
cattcagtgggaaacctacagaccttgcgattagaccggaatcccctgacttgtgactgc
agacttctgtgggtagtgcgtcgccggcttaggctgaatttcgataatcgtcagccatca
tgtaccgccccggatcgtgttcgcaagcgcgagttccgagatttttcagaggcagaactc
tcaaaactgtttgtctgcaggccagcgtatatcaagaaccaaaagccgcaggaagcgagc
gtggacgagggcgcaaatgtgcagttcgaatgcaaagcagaagggcatcctccacctttt
ataacctggttatcacccaagcagacttcttttaactccatggggagaatacgggtgctt
gcgaacgggagtctagaggtgcgttacgcccaggtgcaggacaccgggacgtacctatgt
gtcgcaggtaacgctgcgggaaaagacacaatcagtgcaagtcttcaagtgcaacacttc
tctcagaactacacagcttcatatttgtttgatgaaagatgggttgaaacttcattgcct
ccttcaacaaactcttcactgcaagggtcaaacctttacccctttgatgccaaaacgctc
gtcattgccactactatgggcttcctgtcttttttgagctcagtggccatttgttttgtg
ttcatgttcatctggagccaaagtcaaggtcagattaagcatacagccactattgacttt
gtgcctcgtgcatctgtgaaaggcggtggagacggtggagactctggaaggttcacaatg
aagctaatataa
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