Trichomycterus rosablanca: 134310844
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Entry
134310844 CDS
T09921
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134310844 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
TA_inhibitor
Motif
Other DBs
NCBI-GeneID:
134310844
NCBI-ProteinID:
XP_062848625
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Position
3:complement(7022182..7063854)
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AA seq
511 aa
AA seq
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MAVASDMRVHKSGFVEVLVRERWHRVLAELTDESLSLSCEDSARISAEVNGVPNGTRDSP
ESPETGARTAPDSPERVPETIANRKRCVRVVKQDVGGLGISIKGGKENKMPILISKIFKG
LAADQTQALYVGDAILSVNGVNLRDATHDEAVQALKRAGRVVTLEVKYMREATPYVKKTS
PVAEIGWETPPPESPRLGSPHCELPSPPLLSLQGDCRYIPLQMCHVTRAMTTPDPENRQL
ELHSPNAKHTVVLRCSDSASAHAWFESMQSVTNKLMSKVITELRDYAAKNGIGAAHEIRH
LGWLAEKTESERPQWKPVLVVVTEKDLLLYDSMTRIKENWLNPAHTYPLLSTRLVHSGPD
RGSPKPGGELSFATRTGTRLGIETHVFRAETCKDLSMWTRHIVTGCHAAAEMIKEVTTSC
MYKGQDCRLVIHYELGFSVLPEGEAAPTQPLFCYPFEKLRMSSDDGVRMLYLDFGSKEGE
IQLDLHSCPKPIVFILHSFLSAKITRLGLVA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcgtccgacatgcgggtgcacaagagtggcttcgtggaggttctggtccgg
gagcgatggcaccgggtgctggcagagctgaccgacgagtctctgtctctgagctgcgag
gactcggctagaataagcgcggaggtgaacggcgttcccaacggcacccgggacagtccg
gagagtcctgagaccggcgcccggactgcgcccgactcccccgagcgcgtccccgagacc
atcgccaacagaaagcgctgcgtgcgggtcgtgaagcaggacgtgggcggcctgggcatc
agcatcaaagggggcaaggagaataaaatgcccatactcatcagtaagatctttaaggga
ctcgctgctgatcagacacaagcgctgtatgtaggagatgccatcctgtctgtgaacgga
gtcaatctacgcgatgccacacacgatgaagctgtacaggcgttaaaaagagccggccga
gtggtcacactggaagtgaagtacatgagagaagccactccgtatgtgaaaaagacctcc
ccagtggccgagatcggatgggagacgcctccaccggaatctcctcggctcggcagcccc
cactgtgaactacccagccctccgttactgtcactgcagggagactgcagatacattcca
ctccaaatgtgccatgtcacccgcgctatgaccacacctgatcctgaaaacagacagttg
gagctgcactctcctaatgcgaagcacacagtggtgctgcgctgctcagactcagcctca
gctcacgcctggttcgagtccatgcagtccgttaccaataaactcatgagcaaggtcatc
actgagctccgtgattacgcggctaagaacggcatcggcgctgctcacgagatacgccac
ctcggctggctagcagagaagaccgagagcgagaggcctcagtggaagccagtgttggtt
gtggtgacagagaaagacctgttgctgtatgacagcatgacacgtataaaggagaactgg
ctcaaccctgcacacacataccctctactttccacacggttggtgcactctggtcctgac
cgaggttcacctaaaccaggtggggaattatcattcgctacacggaccggcacgagactg
ggcatcgagacgcacgttttccgagctgagacctgtaaagacctgtccatgtggaccagg
cacatcgtcaccggctgccacgcagcggctgagatgatcaaagaagtgactaccagctgc
atgtataaaggtcaggactgcagactcgtcattcactatgagctgggcttttcggtcctg
cctgaaggagaagctgctcccacccagcctctgttctgctacccttttgagaaactacga
atgtcatcagatgatggggtgcgaatgctgtatttggatttcggaagcaaagagggtgaa
attcaactggacctgcactcctgtcctaaacccattgtgtttattctccactccttcctt
tctgcaaagatcaccagactgggattagtggcctaa
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