Trichomycterus rosablanca: 134310874
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Entry
134310874 CDS
T09921
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134310874 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134310874 (prpf31)
Spliceosome [BR:
trn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134310874 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
134310874
NCBI-ProteinID:
XP_062848662
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Position
3:8142372..8151518
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AA seq
511 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYGGGEEEQSDGEMAGGVGDGGLEDIPEEMETDYSGTES
VNSIAKLRNSKSFAEIMEKIAQYVGNPRKNTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGTLLGEEELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLAARVDSFHESAVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DASRKKRGGRRYRKMKERLGLTEIRKHTNRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKREGETSKM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagacgagctcctggcagacttggaggaggccggagatgaaggagaagat
ggactgtatggaggtggagaagaagagcagagcgatggagagatggctgggggagtggga
gatggaggtctggaggatattccagaggagatggagacagactacagtggcacagagagt
gtgaactccattgcaaaactgcgcaacagcaaatcttttgctgagatcatggagaagatt
gctcaatatgtggggaatccacgcaaaaacactgacgtttcaggtcctgtggaagctgat
ccagagtatcggctcatcgttgctgcaaacaatctgactgttgaaattgataatgagctg
aatattattcacaagttcgtgcgtgataaatactctaaacgattcccagaactggaatct
ctggtgcccaattcgctggattacattagaactgtgaaggaattggggaataacctggaa
aagtgtaagaacaatgagacactgcagcagatcctgaccaatgccaccatcatggtggtc
agtgtcactgcctccaccacacagggtacactacttggtgaagaggagctccagcgactg
gaggaagcgtgtgatatggcgctagagctcaaccagtcaaaacacaggatctatgaatat
gtcgagtccaggatgtccttcattgctcccaatctatccatcatagttggggcctccact
gctgccaaaatcatgggtattgctggaggactgacgaacctgtccaagatgccagcatgt
aacctgatgctgttaggggctcagaggagaactctatcagggttcagcagcacctcactg
ctccctcatacagggtacatctaccactgcgacgtcgttcagtcccttcctcctgatctg
aggaggaaggcggcacgtctggtctcagccaagtgcacacttgctgctcgcgtggacagc
tttcacgagagtgcagttggcaaggtgggatacgacctaaaggaggagattgagcgcaag
tttgataaatggcaggagccgccgcccgtcaaacaggtgaagccgcttccagcgccgctc
gacgcttccaggaagaagagaggtggcaggagataccggaagatgaaggagaggttgggt
cttaccgagatcagaaaacacaccaacagaatgacgtttgcagagattgaagatgacgcc
tatcaggaggacctgggcttcagtctggggcagctgggtaaatcgggaagtggcagagtg
agacaagcacaggttaatgatgccactaaagctcgcatctccaaatccttgcagcgaaca
ttgcagaagcagagcatgacgtacggtggcaagtccacagtcagagacagatcttcagga
accagctccagcgtagcattcactcccttacagggtttggagatcgtgaatcctcaggcg
gcagagaagaaggtggcggaagccaaccagaaatatttctccaacatggccgagttcctg
aaggttaaaagggagggagagacgagcaaaatgtga
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