Trichomycterus rosablanca: 134310894
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Entry
134310894 CDS
T09921
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134310894 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134310894 (prpf3)
Spliceosome [BR:
trn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134310894 (prpf3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
134310894
NCBI-ProteinID:
XP_062848700
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All DBs
Position
3:10257545..10267272
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AA seq
704 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVIAALHCVGKGLDKQKTTEQLRPFLDDSAS
SFVERLFEALDESKNSRGSKGTTEKNRKRELKEVFGDEVEPPRAGEGDESAVKKRRVPRF
EEVDEPEVLPGPPMESPGMLTKMQIKQMMEAATRQIEERKKQLSFVAPVASPRLPSGPSQ
PVAPGVRPLLSGVGAAGLGQSIGPSQAASFMNDAIEKARKAAELQAKIQSTLTQKPDILG
ALNNTGSQNLVALANLHAMGIAPPKVDIRDLSKPTPLILDELGRTVDASGKEVELTHRMP
TLKANIRAVKREQFKLQLKEKPSDDLESTSFFDPRMAVPPPQRQRRGFRFHDKGRFEKIA
QRIRTKAQLERLQMEIAQAAKKTGIQASTKLALIAPKKELGEDEVPNMEWWDSFILLNST
EFFDNMVFDNMEFHGITNLVEHPAQMAPPVDGDIAVTLGVYLTKKEQKKLRRQTRREKQK
ELQEQVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAAR
KLTAEQRKEKKVKKLKEDLTQGVHISVYRIRNLHNPAKKFKVEANANQLYLTGTVVLHRD
VNIVVVEGGPKSQKKFKRLMLNRIKWEEPSSKREEIHGSDDEGSRKHNKCSLVWEGTAKE
RSYGEVKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLETADD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccaagcgagaggtggaggagctgcggccctgggtggaacgcactgtaaag
aaggtgctgggcttttccgaacccactgtggtcattgcagctttgcactgcgtgggaaaa
ggcctggacaaacagaagacaacagagcagctcaggccttttctggatgattcggcaagt
agttttgtggagcgtctgtttgaggccctggatgaaagcaagaactctcgggggagtaaa
ggcacaaccgagaaaaaccggaagagagaactaaaggaagtttttggagatgaggtagag
ccaccaagggctggagagggggatgaatctgcagtaaaaaagagaagagtgcctcgattt
gaagaggttgatgagccagaagttctacccggacctcctatggaaagtcccggcatgctc
accaagatgcagattaagcagatgatggaagcagccacacgccagattgaggagaggaag
aagcagctaagttttgttgctcctgttgcatcgcccagattaccctcgggtccttcccag
cctgtggctcctggtgtgcgtcctctcctttccggagttggcgctgcaggcttgggccag
tccatcggcccctctcaggccgccagctttatgaacgatgccatcgagaaggcgcgcaag
gctgctgagcttcaagccaagatccaatccacactgacccagaaaccagacatcctggga
gctctgaacaatactggctcacaaaacctggtggcacttgccaaccttcatgccatgggc
attgcaccacccaaagtggacattcgtgatctgtcaaagccaacaccactcattctggat
gagcttggcaggactgtcgacgctagcggcaaggaagtggagctcacacatcgcatgccc
acgctgaaagctaacatcagagcagtaaaacgagagcagttcaagctgcagcttaaggaa
aagccttcagacgaccttgagtccacgtcgttcttcgaccccagaatggccgtgccacca
ccgcaaagacaaagaagaggcttcaggttccacgataaaggccgatttgagaagatagct
cagaggatacgcacaaaagctcagttggagaggttgcagatggaaattgcgcaggcagct
aaaaagactggtatccaagcctcgaccaaactagctctgattgcccctaagaaagagctt
ggtgaggacgaggtgcctaacatggagtggtgggactcttttatcctgcttaacagcaca
gaattctttgataatatggtgtttgacaatatggagttccatgggatcactaatttggtg
gagcacccagcccaaatggcacctccagtggacggtgatatagcagtgacgctgggtgtg
tacctgacaaagaaggagcagaagaagctgaggagacagacgcggcgtgagaagcagaaa
gagttgcaggagcaggttcggcttggtctcatgcccccaccagagcccaaagtacgtatc
tccaatctgatgcgtgtcctgggcacggaggcggtgcaagatcccacgaaggtggaggcc
catgtcagagcgcagatggctaagagacaaaaggctcacgaagaggcaaatgcagcacgt
aaactcacagcggaacagaggaaggagaagaaagtaaagaagctgaaggaggatctgact
cagggtgttcacatttctgtctacagaatcagaaacttgcataacccagccaagaagttc
aaggtggaggccaatgcaaaccaactgtatttgacgggcaccgtggttctgcacagagac
gtcaacattgtggtggtggagggaggacccaaatcgcagaaaaagttcaagcgactgatg
ctgaacaggatcaaatgggaagagcccagttcaaagagggaagagattcatggctcagac
gatgagggatcgagaaagcacaataagtgctcactcgtttgggagggtacggcaaaggag
cgcagctatggtgaggtaaagtttaagcagtgcccgacggagaacatggcacgtgagcac
tttaagaaacacggcacagagcactactgggatctggcattgagtcagagtgtcctggag
actgcagatgattag
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