Trichomycterus rosablanca: 134310949
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Entry
134310949 CDS
T09921
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134310949 (cicb)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134310949 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
DUF3915
Motif
Other DBs
NCBI-GeneID:
134310949
NCBI-ProteinID:
XP_062848807
LinkDB
All DBs
Position
3:complement(13675815..13764230)
Genome browser
AA seq
2530 aa
AA seq
DB search
MRPLKKQRGRSPLSTRAKSGRKRGDKQDKQSQSTPTAVASRKTTPSKLDISEGKPSKRTT
TPNKESLEVQMNGLSAEVDQAEQVVVSVNKMTGPKDTNSKIHNITMTSSISSSLLTNSAA
STPLSTNMAAINSNKSTSASNNSPITLSSRKTATFKARVPKKKFMYEHGANNNSPISPTP
VSSFALNNHSSTPRSPVSPSSHPVANNVIKVNNDVTAVNIDSKVLAENMVSTELKFNCVA
TAKVVKDEVPCEKERIVTQVETDTYGEVAPNSAGSSTTDTASEQSPDVEVIESSDLLQNA
GTRSPSTKTLTLSPALTPGNHQQEGFSGIADALAKGLKNQRVLARHQRTKKVAQGEEPIN
ECVFIRGVVRGATKEQLNVGLQINGEEMQLLLPFHTLVSQPHQNIDLILDVPPPGNDPVE
VGTRVCVPYGGDKGKEWYREGVVSQVDSHPAVACPYRVLLQEEQNHCKARNAKGEEQRKP
SIQVVWVSRQNLRLLVPPWDGDMPEREGRQREDIEVEREMCQLSSRMVLKDAKPPQMSTG
FKDIAPSLSASSPVVMMSNYALSVVRGKESHLPEVRDKERERARERERKQLQTPEVDLEV
LQLNLAPLQEAVGTLVSEVPITVRSNQHRQILSKPSGYSSPISVVGTFSGASLGIHLTSP
SSSSPHPPSASPFVGSDRVPSHLQPSAVPPSPSSKGSLTLLDKTPTPSQTSTPILGSSAS
SSASSSRSRTPLSAAQQIYKKGDVVCTPNGIRKKFNGKQWRRLCSKDSCMKESQRRGYCS
RHLSMRTKEMEGAGGEHKGGGGSSSGTATPSDLRGRASSEFDWEETSRDSSETSSRGTDS
RPRLVLPSLLPQDFSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPAPSPSPSP
LFGFRPANFSPITTLTVLPPRRHRQTSGTSTSKPSTSVMEKEREKLVTGIVPSFQTSLTF
TVPVSPNKNKLDAAQPTTTLMQNCPKPELEQGRLDLSVGKSFRVLSPQTNYSCSQRTPSF
TASSLPPSPITLESGSQRAISQQSLRDSPVIVRNPEAPLAKFTERPPAKPANDGVANSKD
NNFTSVLTGARLQMPVPINGAASNNGAVLLHSPSSTLVLVSSISSLPNPNPTTQSSPALA
CISVPSPAPDFASSGSAAGADQGKGGLTTLQQPVPCHPAPTALLPLILPAETLHPVPCKD
IIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQSVNHSQAGTLKKES
QGGSVVKEVVEGASNLSLRPTPSIDDLHQEKERETERERPDSETESDVDDPFLPGLLPDP
PVSASPGKRRTQSLSALPKDDKNSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDN
RTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSESRNAPGG
KDIRERSMSETTEPPSVSMASELKAVGPGVMGMSDRSGGEGHARPRAFSQSAMHSLERSE
RGNPQVLAELAQMCGEGGQISGRGALPHVQRGMSEDMTSDDERMVICEEEGDDDVIEDPY
PGSSIDLKCKEKVTDSDSETGSGDEGERKRIFAPVICSTASGPGHGRSLSLSSYPVHRHI
SDAPFKRRRAIEGADGERRHAEGGASHGLPLSSSGQSTSVSASSALGALRVASTVVTNVV
RPVVSTPVPIASKSAHERKAAAPHAQFFGATLAPAGGGAYYSSSSSIPVTAPGTQGGLNL
VLGGTFQAPSAVQLITPPPQNTASPATVAATQSNGPIPVPLLQPHILPTTSPAQPAGHKA
VTQVQYILPTLSVNSKSSLPQQPVNSPTGVFTVPTAPPTIVTLANGKQSGYNSVPAVGVV
SQGARVQTQSPVLQGKMLVPMATVRTTPAPSQQFPLMAPPLPVQNGAQSGNKIIQIAPMP
VVQSQLPPAGNTFPVTMAAATVVAPGSTPSQAVLLPPPPTRITYVQSAQGGPSTIPLVST
ATGSSSQTAAPTPGMAYVQPSLATFTAIGHPGPTLVQPLITGQPPLLAPPQSPNPAISAI
YPSTAVTLATGVVSAATMPPSVVYSVSSPSILPKHTSTTSATTVTLAGSEKHGHGPAHPE
LDRQTEKTPLSHTERLNKGGSSTAPPSGVSMTLHSASPAQPGTAGISKLPPVPARPPQKV
KATLANIPVGCYDGGGRGKEREKDKEKDKEREREKEKESGSSLFFEAEKGGETVPAALAT
QEESSTEAEAHSVGETGTTSARSKEPNAKETEWRDSASCSPLPVSTSDPAPPLSQSDKDA
PPPKKLKSRPPPLKRPFDSVDKVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAI
LGSYRRKRKNSTGERDLDSSTDDPISPKRKNRRRSSCSSEPNTPKSAAKCEGDIFTFDRP
GTDGEDVLGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQSRYADIFP
TKVCLQLKIREVRQKIMQSAAPAECPGTSDSFPGPSGSASNEGGGGPECAEKELEREEDL
NLSDSLDSTR
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgagaccactgaagaaacagagaggacgctctcctttgtccacacgggccaaaagtgga
agaaaaagaggggacaaacaggacaaacagtcacaatccacacctactgcagtggcatca
cgcaaaactactccatccaaattagacatctctgaagggaagccaagcaaaagaaccacc
acaccaaacaaggagagtctagaagtacagatgaatggactgtctgccgaagtagatcaa
gctgagcaggttgtcgtcagtgttaataaaatgactggccctaaagacacaaactcaaaa
atacacaacattaccatgacaagcagtatatccagcagccttctaacgaacagcgcagct
agcaccccactcagcacaaacatggcagccattaactcaaataaaagcacctccgccagt
aacaacagccccatcacactctccagtagaaaaacagctacctttaaagctagagtgccc
aagaaaaagtttatgtatgaacatggagcaaataacaactctcctatcagtcccacccct
gtgtcttcatttgcacttaacaatcactccagcacacctcgcagtcctgtttctcctagt
agtcaccctgtagccaacaatgtaatcaaagtaaacaatgacgttacagccgttaacatc
gatagcaaagtattagcagaaaatatggtatccacagaattaaaattcaactgtgtagct
acagcaaaggttgtaaaagatgaagttccctgtgaaaaggaaagaatagtgacacaagtt
gaaacagatacttatggagaggttgccccgaactccgctggttcatcaaccacagataca
gccagtgaacagtctccagatgttgaggtaatagagtcctcggatctgcttcaaaatgca
gggacaagaagcccatcaaccaagacactaaccctctctccagccctcacaccaggcaac
catcagcaagaaggtttttcaggaatagctgatgcactggcaaaaggactcaagaatcag
agagtgctagctcgtcatcagagaacaaagaaagtagcacaaggagaagagcctatcaat
gaatgtgtgtttattcgtggtgttgtgcgtggagctactaaagagcagctgaatgtagga
ttgcagataaatggagaagaaatgcaacttttgctaccttttcatacactagtaagtcaa
ccacaccaaaatattgacctcatattagatgtcccaccaccaggtaatgaccctgtggaa
gttgggacacgtgtttgtgtgccttatggaggagataaagggaaagaatggtatagggaa
ggagtggtgtcacaggtagactcccatccagctgttgcttgcccatacagggtgctactg
caggaagagcagaatcattgtaaggcaagaaacgcaaaaggtgaggagcaaagaaaaccc
agcattcaggttgtatgggtgtcccggcagaatcttcgccttctagttccaccttgggat
ggggatatgccagagagggagggaagacagagagaggatatagaggtagagagagaaatg
tgtcagcttagtagtagaatggttttaaaggatgcaaaaccacctcaaatgagtactggg
tttaaggacatagcaccttctttatctgcatcttcaccagtggttatgatgtcaaactat
gcattaagtgtagttcgtggaaaagagagtcatctacctgaggtcagagacaaggagaga
gaacgagcaagagagagagaaagaaagcaactacagactccagaggttgatttggaagtc
ttgcagcttaacctggcacctcttcaagaagcagtagggactttggtttctgaagtaccc
ataacagttagatccaaccagcatagacagatcctttctaagccctctggatactcaagt
cctatctcggttgtcggaaccttctcaggcgcatccttgggtatccacttgaccagcccc
tcatcaagcagccctcatccaccttctgcatcaccttttgtaggctctgatagagttccc
tcacacctacaaccttcagctgtgcctccttcacctagctcaaaaggttctctcaccctc
ttggacaagacccctactccttcacagacctctacccccatcctagggagttctgcgtca
tcttcagcgtcctcctcgcgatcaagaactccactttctgctgcacaacagatttataag
aagggtgatgtggtgtgtactcccaatggtattcgcaagaaattcaatggaaagcagtgg
cgtagactgtgttcaaaggatagttgcatgaaagaatctcagcgaagaggctactgttcc
agacatctctctatgcgcactaaagagatggaaggggcaggtggagagcataaaggagga
ggagggagcagctcaggaacggctaccccttcagacctccgaggtcgagccagcagcgaa
ttcgactgggaagagacatcacgggacagcagtgaaaccagcagtcgaggaactgactca
cggccacgactcgttcttccatcacttttgccacaggacttttcacggtttgactttgat
gaatgtgaggcagctaccatgcttgtttctttaggaagctcacggtcagggactccctca
ttttccccaatatccaaccaatcacctttttccccagctccctctccatctccttctcca
ctttttggatttcgtcctgccaacttcagtcccattacaactttgacagtcctacctcct
cgccgccaccgtcaaacgagtggcacaagcacctctaagcctagtacctcagtgatggag
aaggagcgagagaagcttgtaactggcattgtaccttcttttcaaactagcctcaccttc
accgtacctgtaagccccaacaagaataaattagatgccgcacaacccacgactacttta
atgcaaaattgccccaaacctgaactggagcagggcagacttgatctctcagtaggaaaa
tcctttcgagttctttctcctcagacaaattactcttgcagccaaagaaccccatcattc
acagcttcttctctgccaccatctcctataaccttagagtcagggtcacaacgggccatt
tctcagcaatccttgcgtgactctcctgtaattgtgcgaaatcctgaggctcctttagca
aaattcacagaacgtccaccagccaagcctgctaacgatggggtagcaaactctaaggac
aacaactttaccagtgttcttactggtgcacggttacagatgcccgttccaattaatgga
gctgcctccaacaatggggcagtcttactgcacagcccttcatcgactcttgttctggtg
tcttccatttcatcccttccaaaccccaaccctaccactcagtctagccctgccttggcc
tgcatctcagtacccagccctgcccctgattttgcttcctcgggttcagcagctggagca
gatcagggaaaaggtggattaacaacattacagcaaccagttccatgccatcctgctccc
acagctttgttaccacttatacttccagcagaaaccctgcaccctgtgccatgcaaggat
atcatcatgggacgtccaggaacagtatggactaatgtagagccacgctcagtaccagtg
tttccttggcattcattggtccctttcctggcacccacccaatcagatccgtcggctcag
cctggtgagggccagcagtctgtcaatcattcccaggctggcacgctgaagaaagagtcc
cagggtggctcagtggtgaaggaggttgttgagggagcatcaaacctgtctttgcgcccc
actccctctatagacgaccttcatcaagagaaagagagagagacggagagagagagacct
gacagtgaaacggagagcgatgttgacgacccgtttttaccaggcctccttcctgaccca
ccagtctcagcatctcccggcaaacgtcgcactcaatctttgagcgctctgcccaaagat
gataagaacagcccgggcaagagggaaaaggatcacatccggaggcccatgaatgcgttc
atgatcttcagcaagcgccatcgggccctcgttcatcagcggcacccgaatcaagacaac
cgcaccgttagcaagatcctgggcgagtggtggtacgctctgggacccaaagagaaacag
aaatatcatgacctcgcattccaggttaaggaagcccactttaaggcccatccagactgg
aagtggtgcaataaggacaggaagaagtcgagcagcgaaagccggaatgctccgggtgga
aaggacatcagagagaggagcatgtctgagacgacagagcctccctcagtgtccatggct
tctgagctcaaagcagtggggcccggtgtgatgggcatgtccgatcgttctggaggggag
ggccacgcccgcccccgtgccttctcacaaagcgctatgcacagcttggagaggagcgag
aggggcaaccctcaggttctagcagagcttgcacagatgtgtggcgaaggaggtcagatt
tcaggccgtggggctctacctcatgtccagaggggcatgagtgaagacatgaccagcgat
gatgaacgcatggtcatctgtgaggaggagggggacgatgatgtcatcgaggacccatat
ccaggcagctccatagatcttaagtgcaaggagaaagtcacagacagcgacagtgaaact
ggatctggggacgaaggtgaacgcaagagaatctttgctcctgtgatctgctcgacagcg
tcaggccctggacacgggcgcagcctttctctctcctcctacccagtccacagacacatc
tctgacgcccccttcaaaagaaggcgagcaatagagggagcagacggagaacggcggcat
gccgaaggaggagcgtctcacggtctccccctgtcttcctctggtcagtccacctcggtc
agcgcatcttcagcactgggtgcattgagggtggcatccactgtcgtcactaacgtagta
cgacctgttgtcagcactccggtgccgatcgccagcaagtcggctcatgaaagaaaagcc
gccgccccccatgcacagttttttggggcgactctggcaccagcaggagggggcgcatac
tattcctcatcttcgtccattcctgtaaccgcacctggaacacaaggggggctaaatctg
gtgctgggtggcacttttcaggctccgtctgctgtccagctaattacgcctcctcctcaa
aacacagcatcccctgctacagttgcagccactcagagtaacggccccataccagtgccc
ctgctgcagcctcacattctgcccaccacatcacctgcacaacctgctggccacaaagca
gtcacacaagttcagtacatcttgcccaccctgtctgtcaactccaagagctctttacct
caacagcctgtcaactcaccaactggcgtctttaccgtgcccacagctccgcccacaatt
gtcactctggctaatgggaagcagtcaggatacaattctgtccctgcagtgggcgtggtc
agccaaggagcaagagtgcaaacgcagtctccagttttgcagggcaagatgctggttccc
atggcaacagtgcggaccactcctgccccttcccagcagtttcccctgatggctccgcct
cttcctgtccagaatggagctcagtctggaaacaagattattcagattgcccctatgcca
gttgtgcaatcccagcttcctccagcagggaacacattccctgtgaccatggcggcagcc
acagtggttgccccgggctctaccccctcacaagctgtgctgctgcctcctccacccact
agaatcacatatgtccagtccgctcaaggaggcccttctactattccacttgtatccaca
gcaacaggctccagctcccaaacagctgctcccacacctggcatggcatacgttcagcct
tcgttagccacttttacagcaattggccatcctgggccaactttggtgcagcctcttatt
accggtcagcctcctctcttagctccaccccagtctcccaacccagccatctcagcaatc
tacccctctactgctgtcaccttggcaactggagtagtgtcggcagcaacaatgccgccc
agcgtggtctattctgtctcaagcccctccatcttacccaaacacacgtccaccacatct
gcaacaacggtgaccctggcaggctcagaaaagcatgggcacggtcctgcacacccagaa
ctggacagacagactgaaaaaacacctctctcacacactgaaagactgaataaaggcggc
agctcaacagctccaccatctggagtgtcaatgactttacattctgccagcccagctcag
cctggtacagctggcatttctaagctgcccccggtccctgccaggcctcctcagaaagtc
aaggccaccctggccaacatccctgttggatgctacgacggaggggggcgagggaaagaa
cgagaaaaagacaaagagaaggacaaagaaagagaacgtgagaaagaaaaagaaagtggt
agcagtctctttttcgaagcggaaaaaggaggagaaacggtccctgctgctctcgccaca
caagaggagagctcaacagaagctgaagcccacagcgtgggtgagactggaaccacaagc
gcacgcagcaaagagccaaatgcgaaagagaccgaatggagagactctgcgtcctgctct
ccattaccagtatcgacgtcagaccctgctccacccctttcacagtcagacaaagatgca
ccgcctcccaaaaagctgaagtctcgcccgccgcccctcaagcgcccatttgattcagtc
gacaaggtgctgtctgaggtgtactttgaagaacgatttgcagagctgcctgagtttcgt
ccagaagaggttctaccctcgccaaccttgcagagcctagccacatcccctcgtgccatc
ctgggtagctatcgcagaaagaggaagaactccactggtgagagagatctggactcctcc
acggacgaccccatctctcctaagagaaagaacaggcgcagatccagctgtagctccgag
cctaacacacccaaaagtgctgccaagtgcgagggggacatatttaccttcgacaggcct
ggtacagatggagaggacgtattgggcgagctggagttcgataaggtgccatactcgtct
ctaaggagaactctggatcagaggagggctctggtcatgcagctatttcaggagcatggc
ttctttccctcagcccaggccactgctgcattccagtcaaggtacgccgacatcttcccc
accaaggtgtgcttgcagctgaagatccgcgaggtacgccaaaagatcatgcaaagtgca
gcgcccgccgaatgtcccgggacgtcggattccttcccgggaccgtccggatcggccagc
aacgagggcggaggaggacccgagtgtgccgagaaagagctggagcgggaggaggacctg
aacctttccgattccctggactctaccagatga
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integrated database retrieval system
