Trichomycterus rosablanca: 134310954
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Entry
134310954 CDS
T09921
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134310954 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
trn01007
]
134310954 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134310954 (vars1)
Enzymes [BR:
trn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
134310954 (vars1)
Amino acid related enzymes [BR:
trn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
134310954 (vars1)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
134310954 (vars1)
Prokaryotic type
134310954 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_2
GST_C_3
tRNA-synt_1e
GAGA_bind
FAM199X
Motif
Other DBs
NCBI-GeneID:
134310954
NCBI-ProteinID:
XP_062848815
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All DBs
Position
3:complement(14303486..14330043)
Genome browser
AA seq
1276 aa
AA seq
DB search
MDSLYVSSHPDDFRSLLVLIAAEYSSSRPRVHHEEPPASVSRSHPALVLGSAEGTALCGA
SAVGWYLASAGKRTGSDEKQQSQVWQWLSFAENELVPVACAVVFPLLGVMGMDKKLQQSS
RGELLRVLKVLDQALEPRTFLVGESLSLADIAVAMAVLLPFKYALELSDRKSVMNVSRWF
DTCINQPQFLKVLGKIALCQKMAPVSSKPSSATNGAATNSAATNNGTPDSTPANGPPKTE
AQLKKEAKKREKMEKFQQKKEMEEKKKQMQSQSEKKAKPEKKELGVITYNISTPTGEKKD
VLSPLPDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSVSEPNPCGIFMMCIPPPNVTGSLH
LGHALTNAIQDCLTRWHRMKGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGREN
FIQEVWKWKDEKGDRIYHQLKKLGSSLDWDRACFTMDSKLSYAVQEAFIRMHEEGVIYRS
KRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKIEGFDEEVVV
ATTRIETMLGDTAVAVHPDDPRYQHLKGKMVLHPFCDRKMPIVFDSFVDINFGTGAVKIT
PAHDQNDYEVGVRHNLPFINILDENGFLINVPPPFLGMKRFEARKAVLQALKDKGQFKEI
KDNPMVVPVCSRSKDIVEPLLKPQWYVKCSEMGKQAADAVRNGELKIIPEHHLKTWFNWM
DNIRDWCISRQLWWGHRIPSYFVTINDPSVKPGEDVDGHYWISARSEEEAREKAAKRFNV
TTDKISLRQDEDVLDTWFSSGIFPFSIFGWPNECEDLSVFYPGTLLETGHDILFFWVARM
VMMGLQLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLLNSN
LDPVEVERAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKL
WNAVKFAMRTLGEGFKPWEKAQLCGRENVSDRWILSRLSAAVVQCGNGFQAYDFPGITTA
IYSFWLYELCDVYLESVKPVLSRTDAEGQKQADVCRQTLYTCLDVGLRLLSPIMPFVSEE
LFQRLPRRRPQDSPPSISVTPYPESSEFCWHSEEVDQQMEFVMTVIRTIRSLRADYNLTK
TRADCYLQCIDSDTASLVEKYSLQIQTLSYSQAIHLITGGDSAIPAGCAVAIASDRCTVH
LMLKGLIDVEKEVAKLTTKKSELEKQMEKLEEKIKKNDYKEKVPAKVQEQDTEKLRQSQT
ELQKVKEAIENFRKMM
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggattctctgtacgtgtcctcccaccctgacgacttcaggagtttgctggtcctcatt
gctgctgaatactcttcctctcgcccacgggtacaccacgaggagcctcctgctagtgta
agtcggtctcatcctgcactggttctggggagtgcagagggcacagcgctgtgtggtgcc
agcgcggtcggttggtacctagcttcagccggcaagaggactggcagcgatgaaaagcag
cagagtcaggtgtggcagtggctgagctttgctgagaacgagctcgttcctgtagcctgt
gccgtggtctttcctctgttaggagtgatgggcatggacaaaaagctgcagcagagttct
cgtggagagctgttacgtgtcctgaaggttctggatcaggcgttggagccgcgaacgttc
ctggttggagaaagtttgtccctggctgatattgctgttgctatggctgtgctgctgcct
ttcaaatatgcacttgagctatcggacagaaagtctgtaatgaatgtcagcaggtggttc
gatacctgtataaaccagccacagttcctgaaggtgctgggcaaaatcgcactctgtcag
aaaatggcacctgtgtcctcgaaacccagctccgccaccaatggtgccgctacaaacagt
gccgctacaaacaatggcacacccgacagcacacctgctaatggtccacccaagactgaa
gcacagctgaaaaaggaggctaaaaagcgtgagaagatggagaagttccagcaaaagaag
gagatggaggagaagaagaagcaaatgcagtctcagtcagagaaaaaagccaaaccagaa
aagaaggaactgggagtgattacatacaacatctctaccccgactggagagaaaaaagat
gtgctaagtcctctgccagactcgtacagtcctcagtatgtagaagcagcctggtactca
tggtgggagaaacagggcttctttaaacctgagtatgggcggaagagcgtcagtgagccg
aacccttgtgggattttcatgatgtgcattcctccgcccaatgtgaccggctctcttcat
ttgggccatgctttaaccaatgccattcaggactgcctgaccagatggcacaggatgaaa
ggtgagaccacactgtggaaccctggctgtgatcatgctggcatcgcaactcaggtggtg
gtggagaaaaagctgatgagggagagagggatgtctagacacgacctcggccgagagaac
ttcatccaggaggtgtggaagtggaaggatgaaaagggagatcggatctaccaccagctg
aagaaacttggctcctctttggactgggacagggcgtgtttcactatggattctaaattg
tcatatgcagttcaggaggctttcatccgtatgcatgaagagggagtgatctacagaagc
aagaggctcgtgaactggtcctgcaccctcaactctgccatttctgatattgaggtggat
aagaaggagctgacaggccgaacgctgcttccagtgccgggctataaggagaaggtggag
tttggagttctggtgtctttcgcctacaagattgaaggatttgatgaagaggtggttgta
gcgacgacacgtatcgagaccatgttgggtgatacagctgtagcggtccatcctgacgat
cccagatatcagcacctgaaaggaaagatggtgcttcacccgttctgtgatcgcaagatg
cccattgtgttcgacagctttgtggacataaactttggaacaggtgcggtgaagatcacg
cccgctcatgaccaaaatgactacgaagtgggcgtgaggcacaacctgccttttattaac
atcctggacgagaacggattcctcatcaatgttcctcctccattcctgggcatgaagcgg
tttgaggctaggaaagctgtgctccaggctctgaaggacaaaggccaatttaaagagatt
aaagataaccccatggtggtgcctgtgtgcagccgctcaaaggacatcgtggagcccctg
ctgaagccacagtggtacgttaaatgttcagagatggggaagcaggcagctgatgctgtg
aggaacggagagctgaagattataccagagcaccacctgaagacctggttcaactggatg
gataatatcagggattggtgtatctctcgccagttgtggtggggtcacaggatcccgtcg
tatttcgtcacaattaacgatccatcagtcaaaccaggagaggatgtggatggtcattac
tggattagtgctcggtcagaggaagaagccagagagaaagcggccaagcgcttcaatgta
accaccgacaaaatctccctgcgccaggatgaggacgttttggatacctggttctcctct
ggaatctttcccttctctatctttggatggccaaatgaatgcgaggacctaagtgtattt
taccccggcactctgttggaaacaggccacgatattctgttcttctgggtggcacggatg
gtcatgatgggcctccaactcacgggaaaactcccattcaaggaggtgtatctgcacgct
gtggtgagagatgctcatggcaggaaaatgagcaaatctttgggtaacgtcatcgatcca
ctagacgtcatcactggaatctcattagagggtcttcatgctcaactgctgaacagcaat
ctagacccagttgaggttgagagggccaaacaaggacagaaatctgattaccctaatgga
attccggaatgtggaactgatgcgctcagattcgcactgtgtgcctataccagccaagga
cgggacattaatctggatgtgaacaggatcctgggatacaggcatttctgtaacaagctt
tggaacgctgtgaagtttgccatgaggacgctgggtgaggggttcaaaccctgggagaaa
gcacagctgtgtggcagggagaatgtttccgatcgctggattttgtcccgtctcagtgcc
gccgtggttcagtgcgggaacggattccaagcctacgatttcccggggatcaccacagcc
atttacagcttctggctgtatgagctgtgtgacgtctatctggaaagtgtgaagcctgtg
ttgagcagaaccgacgctgaaggtcagaagcaggccgacgtttgcagacagaccctctac
acgtgtctggatgtggggcttcgtctcctttctcccatcatgccttttgtctctgaggag
cttttccagcgcttgccacgcagacggccacaggacagcccccccagcatctctgtcacc
ccttacccagaaagctcagagttctgctggcacagtgaagaggtggatcaacagatggag
tttgtgatgaccgtaatcagaaccattcgatctctcagggccgactacaacctgaccaag
acccgcgcagactgttatctgcagtgcatcgactctgatacagcatctctggtggagaaa
tacagcctgcagatccagactctgtcctactctcaggccatccatttgatcaccgggggc
gacagcgctatcccagcaggctgtgcggtggccatcgcctctgacagatgcactgtccat
ctcatgctcaagggcttaattgacgtagaaaaagaggtggctaaactgacgacaaagaag
agcgagctggagaagcagatggagaaactggaggagaaaataaagaagaacgattacaag
gagaaggttccagccaaggtgcaggagcaggatactgagaagctgaggcagagtcagacg
gaactgcagaaagtaaaggaagccatcgagaacttcagaaaaatgatgtaa
DBGET
integrated database retrieval system
