Trichomycterus rosablanca: 134311243
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Entry
134311243 CDS
T09921
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134311243 (pus7)
Enzymes [BR:
trn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
134311243 (pus7)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
134311243 (pus7)
Prokaryotic type
134311243 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
134311243
NCBI-ProteinID:
XP_062848919
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All DBs
Position
1:complement(39940266..39956022)
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AA seq
686 aa
AA seq
DB search
MLVAVLRITGLRWLKCIAHSYCPATQQIFQHSSTNPKTFQKLSSICKFITMEDKETLAML
SQPGEKRACPEEDSEHTAKRTKLQDEGNDSHGNKKTEEQCEEEEEIEEDGGEHLGDEDKE
GESFADMMKHGLSEVDVGIHKFVSEHKGFSGILKERYSDFVVHEINKEGKIVQLDDLSVP
VETEEVSEEPVECQALTEEQKQQLSDLQLFKNKEGNVAIEVEEDSKEKRTALHKAVKTLY
PGLETKTEEREGKKFIVAYHAAGKKALAAPRKHSWPKNRGSFCHFVLYKENKDTMDAINV
LSKFLRVRPNVFSYMGTKDKRAITVQEIAVLRISAVRLAHLNKCLMNFKLGNFSYKKHPL
KLGELQGNHFTVVLRNISGSDEQVEQAMTSLRDTGFINYYGMQRFGTTAVPTHQVGRAIL
QNNWTEVMDLILKPRPGAEKGYLVKCREEWAQTRDPEAALRKLPVKRCVEGQLLRGLSKF
GKNNIITAFGLIPRNNRLMYIHSYQSFVWNTMVSRRVEAYGLKAVEGDLVLKGGSAHILS
AEEAEKQPIHDVVMPLPGFDVIYPTHEVGKGYKDMLAADNLDIDNMRHKVRDYSLAGAYR
RILIRPSDVSWEVINYNDNTVPLIHTDVQKLENKPAPVYLTEGKYRALKMDFSLPSSTYA
TMAIREVLKMDTSIKSQTRLNTVWLN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgttggtagcggtactcaggattaccggactgaggtggctaaagtgtattgctcacagt
tactgccctgctacacagcaaatcttccaacattcttctacaaatccaaagacttttcaa
aagctttcctccatttgcaaatttataacgatggaggacaaggaaactcttgctatgctg
agtcaacctggggagaagcgggcatgtccagaagaggattcagaacacactgctaagaga
accaaacttcaagatgaaggcaatgacagccatggcaacaaaaagacagaggaacagtgt
gaggaggaagaggagattgaagaggatggaggggagcatctgggggatgaagacaaagag
ggagagagctttgctgatatgatgaagcatggtcttagtgaagtggatgtaggcattcac
aaatttgtcagtgaacataagggattttctggaattctaaaagagaggtactctgatttt
gtggttcatgaaataaacaaagagggaaagattgtgcagcttgatgacctcagtgtacct
gtggaaacagaggaagtatctgaagagccagttgagtgccaggctctgacagaagagcag
aaacaacagctcagtgatctgcaactctttaaaaacaaggagggaaacgtggctattgag
gtggaggaagattccaaggagaaacgtactgcgctccataaagcagtgaagactctgtac
cctggactggagaccaaaactgaggaaagagagggcaaaaagttcatagtggcataccat
gcagcagggaagaaagcattagcagccccaagaaaacattcttggcccaagaaccgtggt
agcttctgccattttgtcctctacaaggagaataaagataccatggatgccataaatgtt
ctttcaaaatttctcagggtccgacccaacgtcttttcctacatgggcactaaagacaag
agagccatcacagttcaggagattgctgtgctaagaatcagcgcagtaagattagctcac
ctcaataagtgcctgatgaacttcaaactggggaatttcagctataaaaagcacccttta
aaactgggggagctgcaggggaaccatttcactgtggtactcaggaacatctctggctca
gatgagcaagtagaacaggccatgacatcactcagggacacaggctttatcaactactat
ggcatgcagcgttttgggaccacagctgtcccaacacaccaggttggcagggccattctg
cagaacaactggactgaggtaatggacctcatcctgaaaccaaggcctggggctgagaag
ggctatctggtgaagtgtagagaagagtgggcacagactcgggatcctgaggcagcactg
aggaagctaccagtgaagcgttgtgtagaaggacagctccttagaggcctttcaaagttc
ggcaaaaacaacattattacagcttttgggctgattcctcgcaacaacaggctcatgtac
atccacagctaccagagctttgtgtggaacaccatggtcagtaggagagttgaagcctat
ggccttaaagctgtagaaggggacttggtactcaaaggaggcagtgctcacatactgtct
gctgaagaagccgagaagcagcccattcatgatgttgtgatgccgctacctggatttgat
gtaatttaccctacacatgaggtgggaaaggggtacaaagacatgctggcagccgataac
ctggacattgataacatgagacacaaagtgcgagattattcgctcgctggagcatatcgc
cgcatcctcatccggcccagtgatgtcagctgggaggtgatcaactataatgacaacaca
gtacctctgatccacacagatgtccagaaactggaaaacaaaccagcaccagtgtatctt
acagagggtaaatacagggctctgaagatggatttctccctcccatcctctacgtatgct
accatggccatcagagaagttctgaaaatggacactagcatcaagagccagacacggctt
aatactgtgtggctgaactga
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