Trichomycterus rosablanca: 134311271
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Entry
134311271 CDS
T09921
Name
(RefSeq) pulmonary surfactant-associated protein D-like isoform X1
KO
K03991
mannose-binding lectin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134311271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134311271
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
trn04091
]
134311271
Membrane trafficking [BR:
trn04131
]
Endocytosis
Phagocytosis
Opsonins
134311271
Lectins [BR:
trn04091
]
C-Type lectins
Group 3: Collectins
134311271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
134311271
NCBI-ProteinID:
XP_062848946
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All DBs
Position
4:complement(713649..716230)
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AA seq
295 aa
AA seq
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MPFDVFSKCRFLCRKDLHLVASTDQKMVLTMELCFIALLLLLHSSPHIVSGDESTLSSTL
SCPAPAGVPGLPGHNGLPGRDGRDGPDGPKGDKGEPGLGLQGPPGKVGPPGLIGSKGQKG
ESGSPGLTVQGPPGQTGTSGEPGIPADRGLIASLQSELDVLKAKMSSIERATSFPTFRRV
GERFYATDGSFAAYNETVKFCAGAGGRVALPRSLEENEALVKFFTPLSSQAFIGATDQRV
EGRFVDSDGMTLKFTKWGSGQPDDYYDAQDCTIIDKYGMWDDNSCETSRLIVCEM
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgatgtcttttccaaatgccgtttcctctgcaggaaggacctacaccttgtt
gcctccaccgatcagaagatggtcctgacaatggaactttgcttcattgctctgctcctg
ctgctccactccagtcctcacatagtaagtggagatgaatctactctctcttcaactctc
agctgtcctgcacccgctggggttccaggtctacccgggcacaacggccttcctggaaga
gatggcagagatggacctgatggacccaaaggagacaagggagagccaggattgggtttg
cagggacctccaggcaaagtaggtccaccaggtctgataggatccaagggacagaaagga
gagtcagggtcaccaggattgaccgtgcagggacctcctggtcaaacaggaacttcagga
gaacctggaattccagcagatcgtggtttgatcgcgtcccttcagtcagagctcgacgtc
cttaaagccaagatgtccagcatagagagggccacgagttttcccacgttccgaagagtc
ggcgagagattctacgcgaccgatggatcatttgcagcgtacaacgagacggtgaagttc
tgcgccggcgccgggggaagagtcgccctcccacgaagcctggaagaaaacgaagccttg
gtgaagttcttcacccccctgagctcacaggctttcatcggggcgacggatcagcgggtc
gaggggcgcttcgtggacagtgacggcatgaccttaaagttcacgaaatggggcagcggc
cagccggacgattactatgatgcgcaagactgcaccattatagacaagtacgggatgtgg
gacgacaacagctgcgagacgtcccgtctgatcgtctgtgagatgtga
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