Trichomycterus rosablanca: 134311332
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Entry
134311332 CDS
T09921
Symbol
cntn1a
Name
(RefSeq) contactin-1a
KO
K06759
contactin 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134311332 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134311332 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
134311332 (cntn1a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
Contactins
134311332 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
Others
134311332 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
V-set_CD47
Pur_ac_phosph_N
Interfer-bind
DUF4998
SpaA
Motif
Other DBs
NCBI-GeneID:
134311332
NCBI-ProteinID:
XP_062849034
LinkDB
All DBs
Position
1:complement(41231029..41328858)
Genome browser
AA seq
1026 aa
AA seq
DB search
MHQLTSLLFAFSLMLTSNPAVTYGEPQSVFDESSGYGPVFEEQPVDTIYPEESQEDQIIM
SCRARASPPATYKWMRNKKEIEFHEGSNDHYRLVGGNLLINNPDKSNHTGNYSCLATNKY
GTIISQEASVLFGYLDMFSTEERVAVQVKEGQGVVLLCAPPLHFPDDLTIRWMLNEFPIF
VPLDDRRFVSQTTGNLYIAKVDATDSGNYSCFVSSPSIAKSVFSKFIPLIPLPHASERSN
RKYAADINVKFPDTYALVGLNITLECFALGNPVPLIGWRKIDGALPAHHEISTAGNLLHI
YNVQYEDEGMYECEVINSKGKDWHKAHLYVEAAPQWVEHISSSERDIGIDYTMSCLASGK
PKPHVYILRNGQKYGKHKLHFTNLTFDDSGMYQCIAENSHGVIHANAELRVFVGAPSFEL
NPVKKRLLGVKNGHVVIECKPKAAPKPVFSWSKGTELLSNTSRIFIWMDGSLEIRNITKL
DEGTYTCFAENNRGKANSTGSLTVTEATKITLAPSNADVSMGEIARMQCAASHDLILDLT
FIWSLNDQAIDIEEDGKYDQIVMDSQPGISSCELVIKDTQLHHVGHYTCMAQTPVDNVTA
SAELLVRGPPGAPGGVRVVDKGVRTVKLHWSHGSDNHSPISKYTVQYRGIKTMEDWKDAV
TSPPIIEGNAETATVIDLIPWTEYDFRVIATNTLGTGEPSDPLHKINTLEAAPVVAPSGV
GGGDGMSRELTITWTPVQPKYYYGNNFGYIIAFKPHDGIEWHKVTIADPQASRYIHKDPS
IPPATRFNVKVKAFNSKGEGPFSNTADIYSAQDAPSEAPIIEEARALSATTAIVSWLPLT
QQPVEGYQVRYWKKSMKNEVSKQSISSKDSQTRLDNLKPDTHYVIEVQAFNGPEFGPASQ
PREIHTEKAPPSRPPKIISTRLNPSGKMVRIAWEHVQSLANESTVENYKVLYKPEDQSTW
KLYTTNKQYIELPRQKDGNYLVEVRAQSKGGDGAVAQVRISAGGVMVAQSLSLCVLLLVA
VLSLAV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagctcacctcactcctgtttgctttctccctcatgcttacctctaatcctgct
gttacctatggtgaacctcagtcagtctttgatgaatcctcaggatatggacctgtgttt
gaggagcagcccgttgacaccatctaccctgaagagtctcaggaagaccagataattatg
agctgccgagctcgagccagcccacctgctacatacaagtggatgcggaataagaaagag
attgagttccatgagggaagcaatgaccactacaggctggtggggggaaaccttttaatt
aacaaccctgataaaagcaaccatactggaaactactcctgcctggcaaccaacaagtat
ggcaccatcatcagccaagaggcttctgtcctgtttggatatctggacatgttttccaca
gaggaacgagtagctgtgcaagtaaaagagggtcagggagtggtacttttatgtgcccct
cctctacatttcccagacgaccttaccattcgctggatgttgaatgaatttcccatcttt
gtccctctggatgatcgacgctttgtatctcagacaacaggaaatctttacattgctaaa
gtagatgctactgacagtggaaactactcttgcttcgtgtctagcccatcgattgctaag
agcgtcttcagcaagtttattcctctgatcccacttcctcatgcttctgaacgttccaat
cggaagtatgcagccgatataaatgtgaagttccccgacacgtatgcacttgttggcctg
aacatcacactggagtgttttgcattaggaaatcctgttcccctgattggatggaggaag
atagacggagcactacctgcccaccatgagatcagcacagcaggtaatctgctgcacatc
tacaacgtgcagtatgaggatgagggaatgtatgagtgtgaggtgatcaactcgaaaggc
aaggactggcacaaagctcacctctatgtggaagctgctccacaatgggtagagcacatt
agtagtagtgagagggacattggcattgactacaccatgtcctgcttagccagtggaaaa
cccaaaccccatgtatacattctaaggaatggtcaaaagtatggcaagcacaagttacat
ttcacaaatctgacatttgatgactccggaatgtaccagtgcatcgctgagaacagtcac
ggggtgatacatgccaatgctgaactacgagtgttcgtgggtgctccttcatttgaattg
aacccagtgaaaaagaggctgctgggagtcaagaatggacatgtggtgattgagtgcaaa
cccaaagcagcacccaaacctgtattctcttggagcaaaggcacagagctgctctccaac
actagcaggatttttatctggatggatggaagtctggaaattcgtaatattaccaagctg
gatgaggggacatacacctgctttgctgagaataacagaggcaaagccaacagtactgga
tctcttacagtcacagaggccaccaagataactctggctccttctaatgctgatgtgagc
atgggcgaaatagccaggatgcagtgtgctgcatcacatgacttaatccttgaccttacc
ttcatctggtccctcaacgaccaagctatagacattgaagaagatggaaaatatgaccag
attgtaatggatagtcagccaggcatatcaagctgtgagctggtgattaaagacactcag
ctgcatcatgtgggccactacacatgcatggcccagacacccgtggacaacgttactgct
tctgctgagctgctggttagaggtcctcctggagctcctggaggagtgcgtgttgtggac
aaaggggtaaggactgtgaaattgcattggagtcacggctcagataaccatagccctatc
tccaaatacactgtccagtacagagggatcaaaaccatggaggactggaaagatgctgtc
acttctcctcccatcatagaaggcaatgcagagacagctacagtaattgatctgattcct
tggacggagtatgattttcgggttattgctacaaatacactgggtacaggagagcctagt
gaccccttacacaaaatcaacaccctggaagcagcgccagtggtggcaccttcaggtgtt
gggggaggtgatggaatgagtagagagttaaccatcacatggacgcctgttcagcccaag
tactactatggcaataactttggctacatcatcgcatttaagccccatgatgggattgag
tggcataaggtgaccatagctgaccctcaggccagccgttacatccacaaagacccctcc
attcctcctgccacaaggttcaatgtaaaagtaaaagccttcaacagcaaaggagaggga
cctttcagcaatactgctgacatatactctgctcaggatgcaccctccgaagcccccatc
attgaagaagccagagccctgtcagcaacgactgctattgtgtcttggcttcctcttaca
cagcagcctgtagagggctatcaggtaaggtactggaagaagtcgatgaagaatgaggtt
tcaaaacagagcatttccagcaaagacagccagactcgactggataacctgaagcctgat
actcattatgtaattgaggtacaggcattcaacggaccagaatttggaccagctagccaa
ccacgtgagatccacacagaaaaagctcctccgagtcggcctccaaaaataatcagcaca
aggttgaaccccagcgggaaaatggtcagaattgcttgggagcatgtgcagtctttagcc
aatgagtcaacagttgaaaactataaggttctgtacaaaccagaagaccaaagtacttgg
aaactctacactacaaataaacagtatatagagctgcccaggcagaaagatggaaattac
ctagtggaggtgagggcacagagcaaaggaggggatggagctgtggcacaagtgcgcatc
tcagctggaggggtaatggtggcccagtctctcagcctctgtgtcttgctcctggtggca
gtactcagcctggcagtctga
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