Trichomycterus rosablanca: 134311540
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Entry
134311540 CDS
T09921
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134311540 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134311540 (slc1a1)
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
134311540 (slc1a1)
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Motif
Pfam:
SDF
DUF5083
CENPU
Mating_C
Motif
Other DBs
NCBI-GeneID:
134311540
NCBI-ProteinID:
XP_062849241
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Position
4:30518972..30542066
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AA seq
530 aa
AA seq
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MDMLGKKEKRGRDVKGVLKRNWVLIATITSVILGIGLGVLVREYASLSHLNKQYFGFPGE
LLMRMLKLVILPLIISSMITGVAALDSEVSGRIGLRAVIYYFSTTIIAVILGIILVTTIK
PGVSQTAENIDRSGSTPNVTTVDTLLDLVRNMFPENLVQACFQQYKTQRKEIELPVSNTS
TDTTTNTTTFPPLTTIMTSIVQNLTTDYTIVGTYSNGINVLGLIVFCVAFGLVIGKMGER
GRILLEFFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWDIFRKMGLYMVTVLSG
LAIHALFFLPLIYVAFVRKNPFTFALGMTQALVTALMISSSSATLPVTFRCAEENNRIDK
RITRFVLPVGATINMDGTALYEAVAAIFIAQLNGLDLDVGQIVTISITATVASIGAAGVP
NAGLVTMVIVLTAVGLPASDVTLIVAVDWLIDRFRTMVNVLGDAFGAGIVQKLSKRELEK
VHNISDVDVANPFALETTLDDEECEKKSYVNGGFTVDKSDAISFTETSQF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctgggcaaaaaggaaaagagagggagggatgtgaaaggcgttttgaagagg
aactgggttctcatagcaaccatcacctctgtgatcctgggaatcggcctgggagtgcta
gtaagagaatatgcttcactctcccatcttaataagcaatactttggctttcctggagaa
cttctcatgagaatgcttaagctggttatcctgccgctaatcatctccagcatgataaca
ggagtggctgctctggattctgaagtgtctggtcgcattggacttcgtgctgtcatctat
tacttttccaccaccatcatagctgtaatacttggtataatcctggtaacaactattaaa
cctggagtttctcagactgcggaaaacattgaccgttcaggatccactccaaatgtcacc
actgttgacaccctgttggatctagtcagaaatatgtttccagagaatcttgtgcaagca
tgtttccagcagtacaagactcagcgcaaggagatagaactgcctgtgtctaacaccagc
acagatactactacaaatactactacattcccacctcttaccaccataatgacatctatt
gtacagaatctgaccacagactacactatagtgggaacatactcaaatgggatcaatgtt
ctcggccttattgtgttttgcgttgcgtttggcctggtgattggaaaaatgggggaacgg
ggacgtatcctgctggagttctttgatgctctgaacgaggccactatgagactggtccaa
atcatcatgtgttacatgccagtgggcattctattcctaattgctgctaagatcattgag
gtagaggactgggatatctttaggaaaatgggcctgtacatggtgacagtgcttagtgga
cttgccatccatgccctttttttcctacccctcatctacgttgcatttgtaaggaagaat
cctttcacatttgctctaggaatgacacaggctttggtgacagctcttatgatctcttca
agttctgcaaccttaccagtcaccttccgctgtgcagaggaaaataatagaatcgacaag
cggatcaccaggtttgtccttccagtcggtgccaccattaacatggatggtacagcactt
tatgaggcagtggcagccatatttattgcccagctgaatggtcttgaccttgatgtggga
caaatagtaactattagcatcacagctactgtagccagcatcggagcagctggtgtcccg
aatgctggattggtaaccatggtgatagtgctgactgctgtgggcctgcctgccagtgat
gtcaccctgattgtggctgtggattggctgattgatcgtttccgcactatggtcaatgtg
ctgggagatgccttcggtgccggaatagtccagaagctctcaaagcgagaactggaaaag
gtgcacaatatttctgatgtggatgtggcaaatccgttcgccctggagaccactctggat
gatgaggagtgcgagaagaaatcctacgtcaatggtggatttactgtggacaaaagtgat
gcgatttcttttacagagacctcacagttttaa
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