Trichomycterus rosablanca: 134311547
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Entry
134311547 CDS
T09921
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134311547 (sox19b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134311547 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
134311547
NCBI-ProteinID:
XP_062849249
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All DBs
Position
4:30724403..30726875
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AA seq
294 aa
AA seq
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MMYSMMEHELKTQAGPQNPHSNGQIMSTHAGSGNVTGAQKNAPCAPGVDPMDKVKRPMNA
FMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAAHMKEYPD
YKYKPRRKTKPPMKKDNPAAKYPPLPGGSLLAAAHAQSGSPRVDSYGWGPAGGYAAVQGD
ALAYQQQLHRYELPLQYATPMSQSYMSSANSYSPMSYSSSPQQPSPVMSMVKPDAFTHSP
TGATNHHRGAVQGDLRDMISMYIPGGDVGDPAAQRGYPSVQQHYLGSTVPLTHI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatagcatgatggagcacgaacttaaaacccaggccgggccacaaaatcctcat
tcaaacggacagatcatgtccacgcacgccggctctgggaatgtcacaggggctcagaaa
aacgcaccgtgcgcgcccggagttgatcccatggacaaagtaaagcggcctatgaatgcg
tttatggtgtggtcccgggctcagaggcgcaagatggcccaggagaacccgaagatgcac
aactccgaaatcagtaagcgtttgggcgccgagtggaagctgctgacagacgccgagaag
cggccgtttattgacgaagcaaagcggctgcgcgcagcgcacatgaaggagtaccccgac
tacaagtacaagccccggcgcaagaccaaacccccgatgaagaaggacaaccccgccgcc
aaatacccaccgctcccgggaggcagcctgctggccgccgcgcacgcgcaaagcgggagt
ccgcgagtggacagctacggctggggtcctgctggaggttacgcggctgtacaaggggac
gcgctcgcctaccaacagcagctgcaccgctacgaactgccgctccagtacgcgacaccc
atgtcccagagctacatgagtagtgcaaactcttacagcccgatgtcgtacagcagcagt
cctcagcaacccagcccagtaatgtctatggtcaagccagacgcctttactcactcgcct
actggagctacaaaccaccaccgcggggctgttcaaggcgaccttagggacatgatcagc
atgtacattcctggtggtgatgtaggggaccctgcagcccagagaggttaccccagtgtc
cagcaacactacctggggagtactgtgccccttactcacatatga
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