Trichomycterus rosablanca: 134311669
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Entry
134311669 CDS
T09921
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
trn
Trichomycterus rosablanca
Pathway
trn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134311669 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134311669 (myo5c)
04131 Membrane trafficking [BR:
trn04131
]
134311669 (myo5c)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134311669 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134311669 (myo5c)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134311669 (myo5c)
mRNA cycle factors
P-body specific factors
134311669 (myo5c)
Membrane trafficking [BR:
trn04131
]
Others
Actin-binding proteins
Myosins
134311669 (myo5c)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134311669 (myo5c)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134311669 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
ERM_helical
Crescentin
Myosin_N
Csm1_N
AAA_16
AAA_22
NPHP3_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
134311669
NCBI-ProteinID:
XP_062849386
LinkDB
All DBs
Position
1:44671714..44696143
Genome browser
AA seq
1746 aa
AA seq
DB search
MALTELYTKYNRVWVPDAEQVWKSAEILKDYTPGDQVLLLQLEDGTEVQYPVESDGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLCVRFVDSKIIYTYCGIILVAINPYKQLPIYGD
AVIRAYSGQNMGELDPHIFAVSEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNAQVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADQPKFKHLRLLSADQFNYTCMGGETEIQGVND
SADMTETCRTFTLLGLKDDFQRDVFKMLSGILHLGNVVIKAVGSDQSSVSSKDYHLGVFC
DLLEVRPEHMCRWLCNRRIVLASETVVKPQPKERAINARDALAKHLYAYLFDCIIQRINQ
ALRVPGKQHSFIGVLDIYGFETFGVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNYLSSNPMFEKPR
LSNEAFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRVSKFPLLADFFHEEKQNYVTK
GVKVKAARPGVKSTNKQLKTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFEYD
SKRVVQQLRACGVLETVHISSQSYPSRWTYIEFYSRYSILMSRAELKLEDKKQTCRTVLQ
RLIPDANQYQFGRTKIFFRAGQVAYLEKLRLDYLRTACVTIQKHLRGWIQRRRYLLIRQA
AITIQQYIRGKRKIRHTITAAALKQAWAAVVIQRYFRGYLVRRLYQLIQVATITIQAYTR
GWMARKRYKKMVAENKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLRKKLEEQS
KESRGLMERLTSLANTHAQGLEKVQALEAELSKAVNERAFIEEREKKSTKKANQVITQLQ
EQRNKVSLENQALQQKLKDSIQKMTDNFEELRKKLIEELQKEERLRKVAENINELQKEDF
DKEIAALKEESRRAMEQKFQMQTQAEEDMKINNDLQEQLVQLTKHVKVIPELRKEIFNLQ
TERDEADKKMKEQTQQTRENLSMVMRQLLGKAKEEDFIHRLENKATENSADEEDLLYVFD
GLHNATRLVETQIREQKEGYESKLQAMVFKNDHLTRENQQLQTLFQEKTDVNLSIGQEVA
RLTSENMVIPELKQQVAELQRHKQELEAQLSEQSAQLTDKMTRLVNDLQSKLKEEISQRR
LLEETNRESERERSEMESRLEELKGEIDQLKKSQQTDNEAKNKLRKEISRLTAENMDFEE
QLDMKDSTIKRLQDQIKALHAPAKASEKATPNVPKEYLGMLAYKKENQDKLVRMLILELK
PRGVVVNMIPGLAAHLLFMCIRHADYLNDGDKLKSLMHAIISGIKQVIADHQGNFEILSF
WLSNTYHLLNCLKQYSGDEEFMKHNTPRQNKNCLQNFDLSEHRQIFSDLAICIYHQFINI
MEDGLFPMIVPAMLEHESLQGLSSMKPAGFRKRTNSVLEDGSKESQGQSYNINSILQLLS
TFYSCMAQQGMEPQLQGQAFRQLFYLIGATSLNSILLRKDLCSYRKGMQIRCNISYLEEW
LKEKGLQANSVMETLRPLSQTAWLLQVNKTTDDDAVEIQQRCHELSSEQIVKILNSYTPI
DDFEKRVAPSFVRKVQALLQEHEGSSQLMMDAQYRFQVTFPFCPSTQALELLQVPGSLNL
SFVTRI
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggagctgtacactaagtataacagagtatgggtgcctgatgcagaacag
gtgtggaaatctgcagaaatcctaaaggactacacaccaggagatcaagttttactgcta
caactagaggatggaactgaagtccagtacccggtggagagtgatggccaactacctcca
ctccgtaacccagacatcctggtgggggaaaacgacctgactgcgctaagctatctccat
gaaccagctgtgctacacaacctgtgtgtcagatttgtggactctaaaatcatctacaca
tactgtggcattatcctagtggcaattaacccatataaacagctccctatttatggagat
gcagtcatccgtgcttattcgggtcagaatatgggagagctggaccctcatatatttgct
gtgtcagaagaagcttacaaacagatggcaaggaacaacaggaatcagtccatcatagtc
agcggggagtctggagcagggaagactgtatcagctcgttatgctatgagatactttgcg
atggtcagcaaatccagcagtaatgcacaagtggaggacaaggttttggcatcgaaccct
atcacggaggcaataggtaatgcaaagaccactaggaatgacaacagcagtcgttttgga
aagtatactgaaatcagctttgataggcgataccagatcatcggagccaacatgaggacg
tacctgctagaaaagtccagggttgtgtttcagtcagagaatgaaaggaactatcatatc
ttctatcagatgtgtgcttgtgcagaccagccaaaattcaagcacttaagactgttaagc
gcagaccagtttaattacacctgcatgggaggggagacagagatccagggagtgaatgac
tctgccgacatgactgaaacctgcagaactttcactctactgggactgaaggatgacttt
caaagggacgttttcaagatgttgtcaggaattttgcacttgggcaatgtggtgatcaaa
gcagttggctcggaccagtcatcagtcagttctaaggactatcacctgggtgtgttctgt
gatctgctagaagtcagacccgaacatatgtgtcgttggctgtgtaatcggcgtattgtc
ctggcctctgagactgtggtcaaaccacagcccaaggagcgtgcaatcaatgcccgtgat
gcattggccaagcacctttatgcctacctgttcgactgtatcatccaaaggattaatcag
gccctgcgtgtgcctggtaaacaacactctttcattggagtactggatatctatggattt
gagacatttggtgtgaacagttttgaacagttttgcattaactatgccaatgagaaactg
caacaacagttcaacttgcatgttttcaaactggagcaggaggagtacatgaaggaggac
atcccctggacactaattgatttctatgacaaccaaccagtcattgatcttattgaggcc
aagatgggcatcctggacttgctggatgaggagtgtctgtttccacaaggcactgataag
aactggctgcaaaagctctataactatctgagctcaaatcctatgtttgagaaacctcgc
ctttctaatgaagctttcgtgatccagcactttgcagacaaagtggaatatcagtgtaaa
ggtttcttagagaagaacagagacacactttatgaagagctggtggacataatgcgagtt
agcaagtttcctctcttggcagatttctttcatgaagagaaacaaaattatgttaccaag
ggtgtcaaagtaaaagcagcacgacctggagttaaatcaaccaacaagcagcttaaaacc
accgtaggagacaagtttcggagttctctgtatttgttaatggaaacgctgaatgctact
acgcctcattacgtccgctgcattaagcctaacgatgagaagctgccatttgaatatgac
tcaaagcgtgtggtgcagcagcttagagcctgtggtgtgctagagaccgttcacatcagc
tctcagagctatccgtcaaggtggacgtatattgagttctacagccgctacagtattctg
atgagccgggcagagcttaagctggaagacaagaagcaaacatgtagaacagtgttgcag
agactcatcccagacgctaaccagtatcagtttggacggaccaaaatcttcttccgggca
gggcaggtggcgtatctagagaagctgcgtttggattatttacgtactgcatgtgtgacc
atccagaagcacttaagaggctggatccaaagacgcagatacctgctcattagacaagct
gccatcaccatccagcaatacattcgtggcaaaagaaaaatcagacatacaataacagct
gcagcgttaaagcaggcctgggcagcagtggtcatccagagatactttcgtggctatctt
gtacgccggctttatcaacttatccaggttgctacaatcactattcaggcatataccagg
ggatggatggcccgcaaacgctacaaaaagatggtggcagagaataaagctctggttcta
caaaagtatgctcgggcctggctggtacgccgacgattccagaccatgcgtaggcttgtc
ttaaacgtgcagctttcctacagagttcagcagctccgtaagaaattagaagaacagagt
aaagagagccgtggtctgatggagagactcactagtctggccaacactcatgctcaggga
ttggaaaaggtgcaggccctggaggcggagctcagcaaagcagttaatgagagggcattt
atagaggaaagggagaaaaagagtacaaagaaggctaatcaagtgattactcagcttcag
gaacagaggaataaagtcagtctagagaatcaagctcttcagcagaaacttaaagactcc
atacagaaaatgacagacaattttgaagaattgaggaaaaagcttatagaggagctacag
aaagaagagaggctgcgaaaggtggcagagaatatcaatgagctgcagaaggaggacttt
gataaagagattgctgcactgaaggaggagagtcgcagggccatggaacaaaagttccag
atgcaaacacaggctgaggaggacatgaagattaacaatgatctccaagaacagcttgtt
caactaaccaagcatgtcaaggtgataccagagttacgtaaggagattttcaatctccaa
actgagagagatgaagcagataaaaagatgaaggagcaaacccagcaaaccagagaaaat
ctaagtatggtaatgagacagcttctcgggaaggcgaaagaggaggacttcattcacagg
ctagaaaataaggccacagaaaattctgctgatgaggaagatcttctgtatgtctttgat
ggactgcacaacgccaccaggctggtggagactcagatccgggagcaaaaggaaggctac
gagagtaagctgcaggcaatggtttttaaaaatgatcaccttacccgagaaaaccagcag
ctgcaaactctctttcaggagaagactgacgtcaatctcagcattggacaggaagtggcc
cgcctaacatctgaaaatatggtgatcccagaactgaagcaacaggtagcagagttgcag
cgacacaaacaagaactcgaagcacagctatctgagcaaagcgcccagctgactgataaa
atgacacgtttagtgaatgatcttcagagtaaacttaaggaggaaatctcccagagaagg
ctcttggaggagacaaaccgagagagtgagagagaaaggagtgagatggagagcaggttg
gaggaactaaaaggagaaattgaccagcttaagaaatctcagcaaacagataatgaagcc
aaaaacaaactcagaaaggagatttcacgacttactgctgaaaacatggactttgaggag
caattagatatgaaagacagcacaataaagaggctgcaggaccaaatcaaagctctacat
gcacctgcaaaagcgagtgagaaagctactccaaatgttcccaaagaataccttggcatg
ttggcgtataaaaaagagaatcaggacaaacttgtgcggatgttaatactggagctgaag
ccacggggagtggtggtgaatatgatacctggattggctgcccatctgctgtttatgtgc
attcgtcatgctgactacctcaacgatggagacaaactgaagtctctcatgcatgccata
atcagtggtattaaacaggtcatcgcggaccatcagggaaactttgagatcttgtctttt
tggctgtccaacacctaccacctgctcaactgcctcaaacagtacagtggagatgaggaa
tttatgaagcacaacacacctcgacagaataagaactgcctgcaaaacttcgacctctcc
gagcacaggcagatctttagcgatctagccatctgcatctatcaccagttcatcaatatc
atggaggatggcctcttccctatgattgtccccgccatgttggagcatgaaagcctgcag
ggcctctcaagcatgaagcccgcagggtttcgtaagcgcaccaacagtgtgctggaggat
gggtctaaagaaagtcagggccaaagctacaacatcaactccatcctgcagctgctgagc
accttttacagctgcatggcacagcaaggcatggagccacagctgcagggtcaggccttc
cgccagctcttctacctgataggagccacatcactcaacagcattctcctccgcaaggac
ctgtgctcctaccggaaaggaatgcagatcaggtgtaatatcagttatttggaggagtgg
ttgaaggaaaagggcctccaggcaaacagtgttatggaaactctgaggccgctgtcccag
actgcctggctgctgcaggtgaacaaaaccactgatgatgatgcagttgagatccagcag
agatgccatgaactctcatctgaacagattgtgaagatcctgaactcatacactcctatt
gatgattttgaaaagcgagttgcaccatcgtttgtgcgtaaagttcaggcgctgttgcag
gagcatgagggctcaagccagctgatgatggatgctcagtatcgcttccaggtcactttt
cctttctgcccatccacgcaagctctggagctgctgcaggtgcctggtagcctcaacctg
agcttcgtcacccgcatataa
DBGET
integrated database retrieval system
