Trichomycterus rosablanca: 134311734
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Entry
134311734 CDS
T09921
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
trn
Trichomycterus rosablanca
Pathway
trn03272
Virion - Hepatitis viruses
trn04382
Cornified envelope formation
trn04514
Cell adhesion molecules
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
134311734 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134311734 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134311734 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134311734 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134311734 (cldn1)
04147 Exosome [BR:
trn04147
]
134311734 (cldn1)
04515 Cell adhesion molecules [BR:
trn04515
]
134311734 (cldn1)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134311734 (cldn1)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
134311734 (cldn1)
Exosomal proteins of colorectal cancer cells
134311734 (cldn1)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
L1 family
134311734 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
TM140
OppC_N
Motif
Other DBs
NCBI-GeneID:
134311734
NCBI-ProteinID:
XP_062849455
LinkDB
All DBs
Position
4:complement(45101697..45108613)
Genome browser
AA seq
211 aa
AA seq
DB search
MANKGIQLLGFILAFFGIIGLIISTTMTEWKMSSYAGDNIITAQAVYEGLWQSCVYQSTG
QLQCKVYDSLLQLPMEIQAARGFMVTGIILGGIAILVAAMGMKCTKFMSEDKQLKSKVAL
AGGVLFLIAGLSAFVATVWYGDNIRRNFFNPFTPTNSRFEFGKALYIGWGACALTIIGGS
MLCCNCGSKSSSKSEPRYPAARPAQPGSGYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaggggattcagctgctcggcttcattttggcttttttcggcatcatcggt
ttaattatttccaccactatgactgagtggaagatgtcttcgtatgccggtgataatatc
atcacagcacaggcggtgtatgaggggctctggcagtcctgcgtctaccaaagtaccggc
caactccagtgtaaagtctacgattcccttctgcagctgccaatggagattcaggcagct
cgagggtttatggtgactggcatcatccttggtggaatcgcaatcctggtagccgcgatg
ggcatgaagtgtaccaaattcatgagtgaggacaagcagcttaaaagcaaagtggctcta
gctggaggagtgttgtttcttattgcaggtttaagtgcttttgttgccactgtttggtat
ggagataacatacgacggaatttttttaaccccttcactccgactaattcaaggtttgag
tttggaaaggctctgtatattggttggggagcctgtgctctgactataattggaggcagc
atgctctgctgtaactgtggcagcaagtcatcatcaaaatcagaacctcgttaccctgct
gcccgccctgcccagcctggctctggctacgtgtaa
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