Trichomycterus rosablanca: 134311738
Help
Entry
134311738 CDS
T09921
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134311738 (irf4a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134311738 (irf4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134311738
NCBI-ProteinID:
XP_062849462
LinkDB
All DBs
Position
4:45838211..45856395
Genome browser
AA seq
457 aa
AA seq
DB search
MNVDGDCSMSVNCGNGKLRQWLIDQIDSGEYPGLVWENDEKTIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGVDKPDPPTWKTRLRCALNKSNDFDELVDRSQLDISDPYKVYR
IIPEGAKRGSKSNSMDDSSAHVTPLFQMHNTYPSLQSQMTSYMLPQDRRDWREFGPDQPH
HQPPHAELQYPYPSTRPLQWHAPPCDNGYQISGSFYTYTPTESHPIAVDPSMRSAEAMAI
SDFRLHVSLYYRESLVKEVTTTSLEGCRITSSPSPSSPSSPSSPGTEERHFGGPEAVLFP
FPYPQSQRRGAEKLPNVLERGVLLWLTPDGLYAKRLCQSRVYWEGPLAPYSDKPNKLEKE
QTCKLLDTQQFLSELQGYIHHGRPMPRYQVVLCFGDEYPDPQRHSKMITAQVEPMFARQL
LYYAGQTNGHYLRGYELASQGTLPVEEYPRSLQHMQE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagatggggactgcagtatgtcagtcaactgtggcaatggcaagctcaggcag
tggctcattgatcagatcgacagtggtgagtacccaggcttggtgtgggagaatgatgag
aaaaccatctttaggatcccctggaaacatgcgggcaagcaggactacaaccgtgacgag
gacgccgcactgttcaaggcatgggctctgtttaagggcaaatacagggaaggagtggac
aagccagaccccccaacgtggaagaccagactgcgctgtgctctcaacaagagcaatgat
tttgacgaacttgtggacagaagccagctggacatatcagacccatacaaagtctaccgg
atcattcctgaaggagcaaaacgaggctcaaagtccaacagtatggacgacagctcagca
cacgtgacacctctttttcaaatgcataacacctacccatcactccagtcacagatgacc
agctacatgctgccacaggacagaagagactggagagaattcggacctgaccagccacat
catcaacccccacatgccgagttacaatacccgtacccatctacccgtcctctgcagtgg
cacgcaccaccatgtgacaacgggtaccagatttccggatctttctatacgtacactcct
acagagtcccatccaatagcagtggatcccagtatgagatcagctgaggcaatggccatc
tctgacttccgcctgcacgtgtcactctactaccgcgagtccctcgtaaaggaggtaacc
accaccagtctcgagggttgtcggatcacctcgtctccctctccctcctctccttcctct
ccatcctctccgggcacggaggaaaggcatttcggtgggccggaggccgtgctcttcccc
ttcccatacccacaatcacaacggcgcggtgctgaaaagctgcccaacgtgctggagcga
ggtgtcttgctctggctgacacctgacggactctatgcaaagcgtctgtgccagagcagg
gtgtactgggaaggtccactagcaccatactcagacaaacccaacaagctggagaaggag
cagacctgcaagctcctggatacacagcagtttctctcagagttgcagggttacatccat
catggacgccctatgccaaggtaccaggtggtgctgtgctttggggacgagtacccagat
cctcagcgacacagcaagatgatcacagctcaggtggaacccatgtttgcgagacagctc
ttgtactatgctggccagaccaatggacattacctgcgaggttatgagctggcctctcag
ggaaccctgccagtcgaagagtacccaaggagtctgcaacacatgcaggaataa
DBGET
integrated database retrieval system
