Trichomycterus rosablanca: 134311754
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Entry
134311754 CDS
T09921
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4 isoform X1
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
trn
Trichomycterus rosablanca
Pathway
trn03020
RNA polymerase
trn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134311754 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
134311754 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134311754 (polr2d)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134311754 (polr2d)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
134311754 (polr2d)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134311754 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
134311754
NCBI-ProteinID:
XP_062849486
LinkDB
All DBs
Position
4:48357738..48361961
Genome browser
AA seq
141 aa
AA seq
DB search
MAAAGVSNVGDIEEDASQLSFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELSEVF
MKTLNYTARFSRFKNRETIGSVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLEGR
FEDEELQQILDDIQTKRSFQY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaggagtttctaatgttggtgatatagaggaagacgcgtcgcagctgtcg
ttcccaaaagagttcgaaaattccgagactcttctgaactccgaggtgcacatgcttctg
gagcacaggaaacagcagaacgagagcgcagaggacgagcaggagctctccgaggtcttc
atgaagactctgaactacacggcgcgcttcagccgcttcaagaaccgcgagaccatcggc
agcgtgcgcagtttactcctacaaaagaagctacataaatttgaactggcaagtttggct
aatctgtgtcctgaggctgcagaggaagcaaaagcactaattccaagtctggagggtcgg
tttgaggacgaagagctacaacagattctggacgatattcagaccaaaaggagttttcag
tattga
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