Trichomycterus rosablanca: 134311935
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Entry
134311935 CDS
T09921
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134311935 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134311935 (chrnb1)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134311935 (chrnb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134311935
NCBI-ProteinID:
XP_062849655
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Position
4:40695254..40752279
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AA seq
493 aa
AA seq
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MKTREWILFTCFFLGLCVIGDSSDAENVLMKKLFSTYNVKVRPAETPKSKVVVRIGMILS
SFVSLNMKDEEMNTVVIMNLEWKDHRLSWNPKEHDGIDVLRIPAGKVWLPDIVLINNNDG
VFDVALHVHVQAYSNGRVTWTPPALYRSSCGVKVTYFPFDWQNCTMVFHSYTYDSSEVDL
QYALDEMGNEIREIVFDSGFSESGEWHIRHKPTRKNVKKQDLYEDITFYLIIERKPMYYV
VNIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADRVPETSLGVPTIV
NYLMFTMVLVTCSVILSVVVLNLHHRSPNTHHMPLWVRKIFIHILPQYLGLLRPKVETPL
SLERPPKKNINAISRAADEYFIRKPATCMLFPKPNRYQPDDLCSDLRKFIDGPSHYLSLP
PELKSAVEAICYIAEQLQAEKDYEALKEDWQYVAMVADRLFLWIFVIFTTVGTLAIFAEA
SFNATPSDPFMSP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcgggaatggatcctgtttacgtgcttctttctcggcctgtgcgtaatcgga
gactcctcagatgccgagaatgtattgatgaagaagcttttctctacttacaatgtcaaa
gtgcggccagcagaaacgccaaagagcaaggtggtcgtcaggattggcatgattctgtca
tccttcgtcagtctgaatatgaaagatgaagagatgaacactgtggtaatcatgaatctg
gagtggaaggatcacagattgtcttggaatcccaaagagcatgatggaattgatgtacta
agaatacctgcaggaaaagtgtggctcccagatattgttcttattaataataatgatgga
gtgttcgatgtggctctacacgtccatgttcaagcctatagtaatggcagagtgacgtgg
actcctcctgctctttaccgcagctcatgtggggttaaggtcacatactttccctttgat
tggcagaactgcaccatggtctttcactcttacacttatgattcgtctgaagtggatctc
cagtatgcccttgatgagatgggaaatgaaatacgagaaatcgtcttcgactccggtttc
agtgaaagcggagagtggcacatccgtcacaaacctaccaggaaaaacgtaaaaaaacaa
gacctctatgaagacatcactttctacctgattattgagcgcaagcccatgtactatgtg
gtgaacatcatcctgccctgcatcctcatcacaatcattgccatttttaatttctacctg
ccacctgatgctggagagaaaatgggtttatccatcaacgtgctgctgacccttactgtc
tttctgctcctgctggctgatagagttccagagacatctctgggtgtccccaccatcgtc
aactacctgatgttcaccatggtcctggtgacgtgctcagtcattctcagtgtggtggtg
ttaaatctgcatcatcgttcaccaaacacccaccacatgccactgtgggtgcgcaagatt
tttatccacatactgccccagtatctaggactcctcaggcccaaggtggagacaccgctt
tctctagagcgtccacccaagaagaacatcaacgccatcagtcgagcagcagacgaatac
tttattcgcaaacctgccacctgtatgctctttcccaaaccgaacaggtaccagccagat
gacctgtgcagtgacctgaggaagtttattgatggtcccagtcactacctgtctctgcct
cctgagctgaagtctgctgtggaggcaatttgctatattgctgagcagctacaggctgag
aaagactatgaagctttaaaggaagactggcagtatgttgccatggtggctgaccgtctc
tttctctggatctttgtcatcttcactaccgttggtactctggccatttttgctgaagcc
agtttcaatgctacacccagtgatcccttcatgagtccctag
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