Trichomycterus rosablanca: 134312109
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Entry
134312109 CDS
T09921
Symbol
cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57
KO
K24729
cilia- and flagella-associated protein 57
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134312109 (cfap57)
Cilium and associated proteins [BR:
trn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
134312109 (cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
Beta-prop_EML
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
CFAP43_N
NBCH_WD40
CC4_CEP85
TMF_DNA_bd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ATG16
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
VPS11_N
Glyco_hydro_35
ArgoMid
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
134312109
NCBI-ProteinID:
XP_062849861
LinkDB
All DBs
Position
4:2244149..2260534
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AA seq
1213 aa
AA seq
DB search
MAAVGAQSHHVFGLRTGVTNNLLFFDEQTVIYPCGNNCVRYSIDQQCQRFIPGTERSQGM
QALAISANRRYLAVSERNERGTITIYDLQHEQSRKRKVLTGGDTGVQEFICMAFSPDSKY
LLGQAEGPEWTLFYWAWEKQKVLATVKSTSTGSVSQVSFNPQDNTQVCVSGNKVLKLFRY
ADGALKQSNAAKLDTHHILSHAWMSEERVIAGTDTGRLLVFESGDLRWEMSVTSQALTHG
AERHEGRDKLEEAESPPRITSIAAYSKGFVCSGGPGSVCLFEKTDEKDAYRKTKEIRIPS
DPFSTDPGQAEQQEVTTLSISPAEETLAASTDRGQIYQIPLASAEMSKDDHAQFEFLFHS
VHSGVVTGLSICVRKPLVVTCSLDRSVRVWNYETSSLELYKDFQEESHSVALHPSGLFIL
VGFSDKLRLMNLLMDDIRTFKEFTVRSCRECVFSHGGHMFAAVNGNVIHIYSTVTFDNIL
NLKGHNGKVRSVVWSADDSRLVSCGMDGAIYEWNALSGDRESESVLKSCSYAGVALSPDA
KSVFAVGNDRTLKEIQDCQIVKEVTSDDVSYTAVVTTHSGRVIFTGTSAGTVRAFRNPLP
MQKDWTEYQAHCGPVTKMAVTFDDQFLLTASEDGCLLIWKIFDKDGRGLKRDKEFSYAEE
ILITKSDLEEKNQVMLELKTRVDELQMENEYQLRLKDMDYSEKVKELTEKFIQQMELLKT
QNQVLKSEKEKQEVALQEKLTEIMERHSKEQQDLESTTNQKLMLEYEKHQELQLRSQKMQ
ESYEEKLRELEGGGRRALEDLTQLYETKLQERVLLLGQCQDESRHRVREFEEIKKQMEED
GDHELQEVRIRYERKLREERETNLRLRGETGVMKKKFGSLQKEIDDRNLEIEKLNEEQQK
LHTVIRSLEKDIKGLRREIKERDETIQDKEKRIYELKKKNQELEKFKFVLDYKIKELKKQ
IEPRENEIKEMKEQIQKMEGELEQFHQKNTQLELDVAEMNLKLRATDKEMHREKQRVRDV
ESLVRRFKIDLHNCVGFIQEPKQLKDAVRDLYERYVQQSDTLEIVAVDADIQREYARQRE
HLEKNVASLKRKLAKDNEVHQADKVKIMKENVTLIKEINDLRKELRQARSQIHEHETQTR
VVKRKSRSATDVKTASSAAPRPTFEEEAERIIQLQRLEIQRLRQECLGQGQLQGQGLALP
TSLNSTRLPALNA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtcggggctcagtcgcaccacgtattcggtttgcgcacaggcgtgaccaac
aacctgctgtttttcgacgagcagacggtcatctatccatgtggaaacaactgtgtgaga
tacagcatcgaccagcaatgccagaggttcattccaggcacagaaaggagccagggcatg
caggctctggcaatcagtgccaaccggcgctacctggccgtgtcggagcgtaacgagcgc
ggcaccatcaccatctacgacctgcagcacgagcaaagccgtaagaggaaggtgctgacg
ggcggcgacaccggcgtccaagaattcatctgcatggcattctctcccgactccaagtac
ctgcttggccaggctgaagggcctgaatggaccctcttctactgggcatgggagaagcaa
aaggtcttggctacagtaaagagcacaagcaccggctctgtcagtcaggtcagctttaac
cctcaggacaacacacaggtctgtgtgagcgggaacaaagtcctcaaactcttccgctac
gcagacggcgccctcaaacagtcaaacgccgccaaactggacacacatcacatcctgtct
cacgcctggatgtccgaggagcgcgtcatcgccgggacggacaccgggcgcctcctggtg
ttcgagtcaggcgacctgcgctgggagatgagcgtgacgagccaggcgctcacacacggg
gcggagaggcatgaggggagggataaattagaggaagcggagtcgccgcctcgcatcact
tccatcgccgcgtactctaaaggcttcgtgtgttcaggcggcccaggcagcgtctgtcta
ttcgagaaaacagacgagaaagacgcctacaggaaaaccaaggaaataaggattccctcg
gaccccttcagcaccgacccgggtcaggcggagcagcaggaggtcaccacgctgagcatc
agcccggcggaggaaacactggccgccagcacagaccgcggccagatctaccagatcccg
ctcgcctccgccgagatgagcaaggacgaccacgcccagttcgagttcctgttccactcg
gttcactcgggcgtcgtcaccggactgtccatctgcgtccgcaagccactcgtcgtcacc
tgctcgctggaccgatccgtccgcgtctggaactacgagaccagctctctggagctctac
aaggacttccaggaggagtcgcacagtgtggcgctgcacccatcaggcctcttcatcctg
gtgggcttctccgacaagctccgcctcatgaacctgctcatggacgacatccgcaccttt
aaagagttcaccgtacggagctgtcgagagtgcgtgttcagccacgggggtcacatgttc
gccgccgtcaacggcaacgtgattcacatctactccaccgtgacgttcgacaacatcctg
aacctgaagggtcacaacggcaaggtccgctcagtggtgtggagcgcagacgacagccgt
ctggtgtcgtgcggcatggacggagccatctacgagtggaacgctctcagcggagaccgc
gagtccgagagcgtcctgaagtcgtgcagctacgccggcgtggcgctctcacccgacgcc
aagagcgtcttcgccgtgggcaacgaccgcacgctcaaggagatccaggactgccagatc
gtaaaggaagtgacatcagacgacgtttcctacacggccgtcgtcaccactcactcgggc
cgcgtcatcttcaccgggacctccgcgggcaccgtcagagccttcaggaacccgttaccc
atgcagaaggactggacggagtaccaggcccactgcggccccgtcaccaaaatggccgtc
acgttcgacgatcagttcttactgaccgcctcagaggacggctgtctcctaatctggaaa
atcttcgacaaggacgggcgcggcctaaaacgggacaaagaattcagctacgccgaggag
atcctgattaccaagtcagatctggaggagaagaaccaggtcatgctggaactgaagacg
cgggtggacgagctgcagatggagaacgagtaccagctgcgcctgaaggacatggactac
agcgaaaaggtcaaggagctcaccgagaagttcatccagcagatggagctgctgaaaacc
caaaaccaggtgctcaagtcggagaaggagaagcaggaggtggcgctccaggagaagctg
acggagatcatggagagacattccaaggagcagcaggatctggaatctaccaccaaccag
aagctgatgctggagtacgagaagcaccaggagttgcagctccgctcgcagaagatgcag
gagagctacgaggagaagctccgcgagctggagggcggcgggcgccgggcgctggaggac
ctgacgcagctctacgagaccaaactgcaggagagagtccttctgctgggtcagtgtcag
gacgagtcccggcacagggttcgagagttcgaggagataaagaagcagatggaggaggac
ggagaccacgagctccaggaggttcggatcagatacgagcgaaagctccgggaggagaga
gagaccaacctgcggctcagaggagagacgggggtgatgaagaagaagttcggcagccta
cagaaggagatcgacgacaggaacctggagatcgagaagctgaacgaggagcagcagaag
ctccacaccgtcatcagatcactggagaaggacatcaagggtctgaggagggagatcaag
gagagagacgagaccatccaggacaaggagaagcgcatctacgagctgaagaagaagaac
caggagctggagaagttcaagttcgtcctggactacaagatcaaagagctgaagaaacaa
attgagccccgagagaacgagatcaaagagatgaaggagcagatccagaagatggagggc
gagctggagcagttccaccagaagaacactcagctggagctggacgtggccgagatgaac
ctgaaactgagagccaccgacaaggagatgcacagagaaaagcagagggtcagggacgtg
gagtctctggtgcgccggttcaagatcgacctgcacaactgtgtcggcttcatccaggag
cccaagcagctcaaggacgccgtccgagacctctacgagcgctacgtccagcagtcggac
acgctggagatagtggccgtggacgccgacatccagcgcgagtacgcccggcagagggag
cacctggagaagaacgtggcctcgctcaagaggaaactggccaaggacaacgaggtgcat
caggccgacaaggtcaagatcatgaaggaaaacgtcactctcatcaaagagatcaacgat
ttgaggaaggagctgaggcaggcgcggtcacagatccacgagcacgaaacccaaacccgc
gtcgttaagaggaagtccaggagcgccactgacgttaaaaccgcttcctctgcagcgcca
cgcccgactttcgaggaagaagctgagcgcatcatccagctgcagcgcctggagatccag
cggctcaggcaggagtgtctgggtcaaggtcagctccaaggtcaaggtctcgccctgccg
acctcgctgaacagcaccaggctgcctgccctcaacgcataa
DBGET
integrated database retrieval system
