Trichomycterus rosablanca: 134312129
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Entry
134312129 CDS
T09921
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134312129 (fubp1)
03041 Spliceosome [BR:
trn03041
]
134312129 (fubp1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
134312129 (fubp1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134312129 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
134312129
NCBI-ProteinID:
XP_062849895
LinkDB
All DBs
Position
4:complement(4328994..4341907)
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AA seq
697 aa
AA seq
DB search
MADYANVPPPSSNSGGVMNDAFKDALQRARQIAAKIGGEGGNPPPPSNDFGYGGQKRPLE
DGDSGFSPTSYYDQPETKKVATSDPFSAMAGMPGLPRSISEEFKVPDGMVGFIIGRGGEQ
ISRIQQDSGCKIQIAPDSGGLPDRCVTISGSTDSIQTAKRLLTEIVEKGRPTPFHHNDGP
GMSVQEVMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFK
VQQAKDMVMDLIRDQGFREQRNEYGSRMGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGE
GLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGTEPDRVAQIMGPPDRAQHAA
SIITDLLRSVQQGGPPGPGGRGRGRGQGNWNMGPPGGLQEFSFTVPTVKTGLIIGKGGET
IKNISQQSGARIELQRNPPPNADPNLKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPH
GPPGPHGGPGPHGPPGPPGPPAPMGPYNPGAYNQGPPGPHGPPGPYQPQGWGNGYPHWQQ
GQPDPNKAAADANAAAWAAYYAQYQQQPQQQQQQQQQQQPPMTPTSSAPGTTQANGQGDP
QAPGQSGQTDYTEAWEEYYKKMGQQGQQPQDYTKAWEEYYKKQGQAAPQTPGAAPSQPGG
QPDYSAAWAEYYRQQAAYYGQGGSQPMGATPPAQQGQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatgcgaatgtgccgccgccgtcttcaaactctggaggagtaatgaacgac
gcttttaaagatgcgctgcaacgggcgagacaaattgcagctaaaattggaggtgaaggt
ggtaacccaccccctccatccaatgattttggatacggaggacagaaaaggcctctggaa
gatggtgactctggattttcaccgacttcatattatgatcagcctgaaacaaaaaaagtc
gctactagtgacccattttctgcaatggctggaatgcccggacttccaaggtctatatca
gaagaatttaaggttccagatggcatggttggctttattattggaagaggtggagaacag
atctcaagaatacagcaagactcgggatgcaaaatacagatagctccagacagtggcggt
ctgcctgatcgctgcgtgactatttcaggctccacagattcaatccagacggctaagagg
ttattgaccgagatcgtcgagaaaggcaggcctacgccttttcatcacaatgacggtcct
ggaatgtccgttcaagaagtaatgatcccggcatccaaagcgggcctggtcatcggcaag
ggcggagaaacgatcaaacagttacaggagcgggctggagtcaaaatggttatgattcag
gatggtcctcagaacacgggtgcagacaaaccactgcggatttccggagatccttttaaa
gtccagcaagctaaggatatggtgatggacctgatcagagatcaaggatttcgggagcag
agaaatgaatacgggtctcggatgggaggaggaggaggaggaggaggaggaggaggagga
ggagggggaggaggaggaggaggaggaggaggagggggaggaggaggaggaggaggagaa
ggtcttgatgttcctgtgccacgcttcgctgtgggcattgtgatcggcaggagtggtgag
atgatcaagaagattcaaaacgacaccggtgttaggattcagttcaaaccagatgatggc
actgagccagacagggtcgctcagatcatgggtccaccagatcgggcccagcacgcagcc
agcatcatcacagaccttctgcgcagcgtacagcagggcggacccccaggtcccggcggc
aggggcagaggacgtggacaagggaactggaacatgggcccgcctggaggcctgcaggaa
ttttccttcactgtacccactgttaaaaccggcctcattattggcaaaggaggagaaacc
ataaagaacataagtcagcagtctggggccaggatagagttgcagaggaaccctcctccc
aacgccgaccccaacttgaagatgttcaccgtgcgtgggtcgccccagcaaatcgactac
gccaggcaactggttgaggagaagattgggggaccggttactccgatgggtggccctcat
ggcccaccagggccccacggaggccctggaccacacggccctcctggtccacctggacct
cctgcgcctatgggcccctacaatcctggagcctacaaccagggacctcctggaccacat
ggaccccctgggccgtaccaacctcaaggctggggcaacggctaccctcactggcagcaa
ggccaacccgatcccaacaaagcagcggctgacgccaatgctgcagcatgggcggcttat
tatgcccagtaccagcagcagcctcaacagcaacagcaacagcagcagcaacagcagccc
cccatgacccccacaagttcagcaccgggcaccacacaagccaacgggcaaggtgacccg
caggctccaggtcagagcggacagacagattacaccgaggcgtgggaggaatattacaag
aaaatgggtcaacaaggccagcagccgcaggattacaccaaggcgtgggaggagtactat
aaaaaacaaggtcaagctgctccccagacacccggagcggcgccctctcaacccggtggc
cagccggactacagcgccgcctgggccgagtattaccgccagcaggcggcctactacggc
caaggaggctctcagcccatgggagcgacgccaccggcccagcagggccagtaa
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