Trichomycterus rosablanca: 134312165
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Entry
134312165 CDS
T09921
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134312165 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134312165 (puf60a)
Spliceosome [BR:
trn03041
]
Complex A
U2 snRNP components
U2 related factors
134312165 (puf60a)
Complex B
134312165 (puf60a)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF1518
Motif
Other DBs
NCBI-GeneID:
134312165
NCBI-ProteinID:
XP_062849949
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Position
4:complement(5834847..5853440)
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AA seq
535 aa
AA seq
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MENGQSTASKLGLPPLTLEQQEALQKAKKYAMEQSIKSVLAKQTLAQPQPINNFQLPNSL
GMASLSMAGFGDPLSPLQSVAAQRQRALAIMCRAYVGSIYYELGEDTIRQAFAPFGPIKS
IDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQMNSIMLGGRNIKVGRPSNIGQAQPIIDQ
LAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCLLAREPTTGKHKGYGFIEYDKA
QSSQDAVSSMNLFDLGGQYLRVGKAVTPPIPMLAPSAPGGLPPAAAVAAAAATAKITAQM
AWNLSTPENRTEDFLNCLEAVAGASILGAMTAGSVTMPQLPQAVMAAQAPGVITGVTPAR
PVIPQVGLVNPVLASPPVLSAAVAAAQEAKEKKEKEEEEAALAGTGQEMLSEQENMSISG
SSARHMVMQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQG
EEEDAEVIVKIFVEFSAVSEMNKAIQALNKRWFGGRKVIAEVYDQERFDNSDLSA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggacagagcaccgcctcgaagctcggcctgccaccccttaccctcgaacag
caggaggcgctgcaaaaggcaaagaagtatgccatggagcaaagcatcaagagcgtgctg
gccaaacagaccctcgctcagcctcagccaattaacaacttccagctccccaattcctta
ggaatggcctcactgtccatggctggtttcggtgatcctctttcacccttgcagtcggtt
gcagcgcagcgacagagggcgctagccataatgtgtcgtgcttacgttggctcaatttac
tatgagctcggagaggacactatcagacaggcttttgctcctttcgggcccataaaaagc
atcgacatgtcctgggactctgttacactgaagcacaagggatttgcatttgtagaatat
gaggtcccagaggcagcacagctggctttagagcagatgaactcaatcatgttgggaggc
agaaacattaaagtgggacgtccaagtaatattggtcaggctcagccaatcatagaccag
ttagcagaggaagcgcgggcctttaaccgaatctatgtagcgtcggtacacccagacctg
tcagatgacgacatcaaaagtgtcttcgaagcatttgggagaatcaagtcgtgcttactg
gctcgggagcccacgacggggaaacacaaaggctacggatttatagagtacgacaaagcc
cagtcgtcgcaggacgccgtgtcctccatgaatctgttcgatttgggtggtcaatacctg
cgcgtgggcaaggccgtgactccacctattccaatgctggcgcccagtgcgcccggcggc
ctcccccctgcggctgctgtcgccgcggctgcagccacggctaaaatcactgctcagatg
gcatggaatctttccactccggagaatcggacagaagacttcctcaactgtctggaagcg
gttgctggtgcgtccatcctgggggcaatgacagctggctcggtgaccatgccgcagctc
ccccaggccgtcatggcagcccaggccccaggggtcattacaggcgtgactccggcgcgg
ccagtgataccccaggtaggcctggtgaatcccgtgctggcctctccgccggtgctgtct
gccgccgtggccgccgcgcaggaggccaaggagaagaaagagaaggaggaagaggaggcc
gcgttagccggcaccggtcaggagatgctcagcgagcaggagaacatgagcatctcgggc
agcagtgccaggcacatggtcatgcagaaactgctaaggaagcaagagtcaacggttatg
gtgctgaggaacatggtcggcccggaggacatagacgacgacctggaaggtgaggtgact
gaagaatgtggcaagttcggtgccgtcaacagagtgatcatttaccaggagaagcagggt
gaagaggaggacgccgaggtcatagttaagatctttgtggaattttctgctgtttccgag
atgaacaaagccattcaggctctaaacaagcgctggttcggaggtcgaaaggtcatagct
gaagtttacgatcaggagcgcttcgacaacagtgacctctcggcatag
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