Trichomycterus rosablanca: 134312199
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Entry
134312199 CDS
T09921
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134312199 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134312199 (chd8)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134312199 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
DEAD
Chromo_MIT1
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
134312199
NCBI-ProteinID:
XP_062850003
LinkDB
All DBs
Position
4:19440902..19550239
Genome browser
AA seq
2514 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDPLSEETFPQSSSDPVEEALKLALGQVDPALNATTDSSNPVFG
DSSPAPIKSTTPIDTPVSAVPLHIQQIPQTASVAAASFSAQAMPRSSLPMAGTSRGSTAV
LLSSPLALPVSGAQATLQQLSAVTQKTSRQTAPKIMILKGPHGQAQVLQSIAGTAGSPGK
LTIARVLTGTPVKPGMSIVSGGAVLNAVHGQVKMGTGVQMVQTPNGPMKQVLLTSLPQTR
SQVPKLHLQTQTQPGQVSVQAQVQEQVASGSTVAAQPQGVTLSTVHQQGDAKRITLVLQQ
PSQGGVNQAGAVSAGGTSTPGSGQQVQQPRLVLGTLPGKLVLQGGQLAALTQARAGQTGA
QSKVLTIQLQMQQPNQQGAKFQLVSSTPSADTSPQVIQISQTQGGQKLAVPIKLLLQPQT
SSASSPGSTISVLKVINTSAGSSANSTTTAALLGVRVAKGHEPLRKVETLCKQEKANRIV
AEAIARAKARGERNIPRVLNHDELPDGQIADIESGATPVGVKKAVSGSKKRSLPMGTTTT
KSVVEEKKVKVKCVGAVVAGGAGGGGTKSKGKTKSNTITLVSGKKRKRNASSDHSDEELN
PSTTPNTQDEDLSQMRRSNRQVKRKKYTEDLDIKITDDEDEPSEDVNITTIAAMSGGHNQ
STGVQLQEMDGDGLSSMQFFVENPSEEDAAIVDKVLAIRLAKKEICPGQYTTVEEYFVKY
KNYSYLHCEWASLEQLEKDKRIHQKLKRFKAKQAQMRHIFQEDEEPFNPDYVEVDRILDE
SKSVDKENGEPVVYYLVKWCSLPYEDATWELKEDVDEGKLEEFKKIQSRQPRLKRTTRPP
ATAWKKLEQSHEYRSGNTLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSE
MFAAGVHGPFLIIAPLSTITNWEREFSTWTEMNAIVYHGSLASRQMIQQYEMYCKDDKGH
LIPGAYKFDALITTFEMVLSDCPELREIYWRCVVIDEAHRLKNRNCKLLDSLKMLNLEHK
VLLTGTPLQNTVEELFSLLHFLDPSQFPSETEFLREFGDLKTEEQVQKLQSILKPMMLRR
LKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGANQNSNVPNLLNTMMEL
RKCCNHPYLITGAEEKILAELREMYDSSAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKSDSDRFVFLLCTRA
GGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKA
SLKLGLDRAVLQSMSCNKDSNVNGVQQFTKKEIEDLLRKGAYAAIMDENDEGSRFCEEDI
DQILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAQKADIDLDTMNR
KNTLVIDTPRVRKQTRQYSSLHGESGELSELDSDEEFSTNNSRQARASRRSERHSGVGYG
RTDCFRVEKHLLIYGWGRWRDILSHARCKRRLGEKDVETICRVILVFCLLHYRGDENIKS
FIWELITPPEFVQEPHTLLNHSGLSIPVPRGRKGKRVKAQSSFDVQKAEWIHKYNPDTLL
LDDGYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHVDSILGGVDFRDIDIWLPEMEQQDVP
SGWWDAEADRCLLIGVFKHGYEMYTTMRADPFLCFLERCGCPDDKDIKAEQHSVDPDLRE
GGNYDKYSEDPEFKPVLRDSKEVYEESSDPQNLDELFIQDNSTPMPEVVQPSGSVGTWYW
PTSSSLTARLRRLITAYQRSYRREQLKMEAAEKGDRRRRRCEQATKLKELARQERQQRWT
RREECDFYRVVSTFGVEQIKTEVGAQKCVEGKLDWTHFRKFARLDKKTDESLNQYFHCFV
AMCRRVCRLQPAHGEESPDLSKSLAPITEERASRTLYRLGLLSRLRELVLSHPSLEERLL
LAPPSSDLPSWWCTPQHDHELLLGAARWGVSRTEHSIFLDQQFSFLKAFRDYLQSQQTTL
VEEIYGHGLTQDQTKVKDLRQSSKEIQLFDSISESDTSAFSYFEGKNRRPVGWDCKKSKD
RRSRGNEKEQEETGGGGPSDSDSDSDSDSSISSHFSHSSDASGDSDAEDEQDDLKMCNVY
EENSTHSLTPSQDGTPPDIISDPLRVNWPKDRVLINRIDKLCSLVLTGHWPSGRRYTLES
QYSLTCDKQGPGENLGYARVSRKGNDILPGQDTEFTVKLLKEEGLKLTFSKQSLIPNGSA
GEASGRQGHKGKESTVTDAPRKRDLPSWLKENPDYEVEGDMLELLVNRTKRKRRKKKTGR
EGGLTGSQKVKVIDMRTGKKCDGERAPALQDLKNYLTENPHHAVAPEWADTVRNSGLLPE
HFFHRLLTLHSSDRKTSHHTTLTQSDPLLGGDEREMLISDGPFIMDHEDLNSDDLTCRHF
LTSAYDTKREDGSSDVDKGDGLSQIVYDGSSREAFLDDIIMAPKNSDSSSNLQY
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccattatggacctatttgatgacacgccactgtttaacctggatcctcta
tcagaagaaacctttccccagagttcttcagacccagttgaggaggctctaaagttggcc
ttgggacaggtggaccctgcattaaatgcaaccacagactccagtaaccctgtgtttggt
gacagttccccagctcctataaaatccacaacacctatagacacccctgtctctgctgta
ccactccatatacaacaaattccccagacagcatctgttgctgcagcttcattttctgct
caggcaatgccacggtcctctcttcccatggctggtactagtaggggttcaactgctgtt
cttttaagttcccctttggctctacctgtgtcaggtgcccaggctacactgcaacagctt
tctgcagttactcaaaagacatcaaggcagacagctccaaaaatcatgattctgaagggc
cctcatggtcaggcccaggtgctacaaagtattgcaggaactgcaggctctcctgggaaa
cttaccattgcaagagttctgacagggactcctgtgaaacctggaatgtccattgtctca
ggcggagcagtgttaaatgctgtccacggacaggtaaagatgggcacaggtgtccagatg
gtgcagacacccaatggacccatgaagcaggtgctgctgacctcgttgcctcagacacgg
tcacaggtgccaaagctgcacttacagactcaaacacagccaggacaggtttcagtacaa
gcacaagtccaggagcaggtggcatctggaagtacagtggctgcccaaccacaaggtgta
actttgtcaacagtacatcaacagggtgatgctaagagaattacacttgtactgcagcag
ccttctcagggtggtgtgaaccaagccggagcagtttcagctggaggcacttcaactccg
gggtctggacagcaggttcagcagcccaggcttgttttgggcactcttcctgggaagtta
gtccttcagggtgggcaactggcagcactcacccaggctagagcaggtcaaacaggggcg
cagtcaaaagtacttactatccagcttcaaatgcagcagcctaatcaacagggagccaag
tttcagctagtctccagtactcccagtgctgataccagtccccaggtcatccagatttct
caaacccagggaggacaaaaactggcagtacctattaaacttctcttgcagccacagacg
agctcagcttccagtcctgggagtaccatttctgtattgaaggtcatcaatacctcagct
gggtcttctgccaactccaccactacagctgccttgctgggtgtgcgtgtggccaagggt
catgaacctttgcggaaagtggagaccttgtgcaaacaagaaaaagccaatcgaattgtg
gctgaggctattgctcgcgctaaagcccgtggtgagaggaacattccacgggttctaaac
catgatgaattgcctgatggtcaaatcgctgacatagaaagtggtgcaactccagttgga
gtcaagaaagctgtgtccggaagcaaaaagaggagccttcctatgggtacaacaaccact
aaatctgtggttgaggaaaaaaaggtgaaggtgaagtgtgttggagctgtggtggctgga
ggagcaggagggggtggcacaaagagtaaaggcaaaacaaagtccaacaccatcactcta
gtctctggaaaaaaaagaaagagaaatgcatcttcagaccattcagatgaagagctaaac
ccttctaccacacctaacacacaagatgaagacctgtcacagatgagacgttctaatcgt
caagtgaaaagaaaaaaatacacagaagatttagacattaaaatcacagatgatgaagat
gagccaagtgaagatgtgaatataaccaccattgcagccatgtctggaggacacaatcag
tctacaggggttcagcttcaagagatggatggggatggcctctctagcatgcagtttttt
gtggaaaacccaagtgaagaggatgcagccattgtggataaagttttggccattcgcctt
gccaaaaaagagatatgtccaggccagtataccactgtggaggaatattttgtgaaatac
aaaaactactcatatttgcactgtgagtgggccagtctggaacagcttgagaaagacaag
aggatccaccaaaagcttaaaagattcaaggcaaagcaggctcaaatgagacacatcttc
caggaggatgaagagcctttcaatccagactatgtggaggtggaccgtatactggatgaa
tccaaaagtgtggacaaagaaaatggagagccagttgtgtattacctagtgaaatggtgc
tctctaccttatgaggatgccacctgggaactaaaggaagatgtagatgaaggaaagctg
gaagagtttaagaagattcagagtcgccaacccagacttaaaagaactactcggccacct
gcaactgcctggaaaaagctggagcagtcccatgaataccgtagtggaaacacactaaga
gagtatcagctagagggagtcaactggcttctcttcaactggtataacaggcagaactgc
attttggcagacgagatgggtctgggtaagacaatccagtcaatagctctactgtctgaa
atgtttgctgctggggtccatggaccctttctgataattgcccccctgtctacgatcacc
aactgggaacgagaattttccacgtggactgaaatgaacgctattgtctatcatggaagt
ctggccagcaggcaaatgatccagcagtatgagatgtactgtaaagatgataaggggcac
ctaattccaggagcatacaaatttgatgctttgatcacaacatttgagatggttctgtct
gactgcccagagctacgtgaaatctactggcgttgtgtagtcattgatgaagctcatcgg
ctaaagaaccgaaactgcaagttgcttgacagcctaaagatgctaaatttggagcataaa
gtattgcttacaggcacaccactgcaaaacacagtcgaggagttgttcagtctgttacat
ttcttagatccttcacagtttccctcagagacagagtttcttcgtgaatttggtgatctc
aaaacagaggagcaggtgcagaaactgcaatctattctgaaacctatgatgctacgtaga
ttaaaggaggatgttgagaagaacctggcaccaaagcaggagaccattattgaggtggag
ttgactgatgtgcagaagaagtactaccgtgctattttggaacgcaacttcagctttttg
agcatgggagccaatcaaaacagcaatgtgcccaatctcctgaacaccatgatggagctt
cgcaaatgctgcaaccacccttatctgatcacaggtgctgaagagaagatattggctgaa
ctaagggagatgtatgattcctctgcaccagactttcaccttcaggccttggtgcgctcc
gcaggaaaattggttctacttgataagttgcttcctcgcctgaaggctggtggacacaaa
gtgcttatcttctctcagatggtgcgctgtctcgacattctagaagattaccttatacac
aaaagatacctctatgagcggattgatggtcgcgtaaggggaaaccttcgacaagcagca
attgatcgcttcagtaaatcagactctgaccggtttgtcttcttgttgtgcacacgagcg
ggaggattgggtattaatctgacagcagctgatacttgtgtcatatttgactctgactgg
aacccacaaaatgaccttcaggcccaagctcgttgtcatcgtatcggccagtctaaggca
gtcaaggtctaccgtcttattactagaaactcctatgaacgagagatgttggacaaagct
agcctgaaactaggcctggatagggctgtgctacaaagcatgagttgcaataaggacagc
aatgtcaatggggttcaacagttcaccaaaaaggaaattgaagatttgctcagaaaagga
gcctatgctgctattatggatgagaacgacgagggtagccgtttctgtgaagaggacatt
gaccagatccttcagaggagagctacaactatcactattgagagtgagggcaaaggatct
accttttctaaagccagctttgttgcctctgaaaataggactgacattgctctggatgac
ccagaattttggcaaaagtgggctcaaaaagcagacatagacttggacacaatgaacaga
aagaatacccttgtgattgatactccaagagtgaggaaacagacacgacagtactcttca
ctgcatggggagagtggtgaactttcagaactagacagcgatgaggagttttcaacaaat
aattcaaggcaggctcgagcctctcgccgctctgagcggcattctggagtaggttatggc
cgaactgattgtttcagagtggagaaacatctgctgatttatggttggggccgctggcgg
gacatcctctctcatgctcggtgtaaacgtcgtcttggcgaaaaggacgttgagacaatc
tgtagggtcatcctggtgttttgtctactacattatcgtggagatgagaatattaaaagc
tttatatgggagcttatcacgcctcctgaatttgttcaagaaccacacacactccttaat
cactctggtctgtccattccagtgcctcgaggtagaaaaggaaaaagggtaaaggctcag
agttcttttgatgtgcaaaaggctgagtggatccacaagtacaatccagatacacttctg
ctggatgacggttatcgcaagcacctcaaacaccaatgtaacaaggtgttgctgagagta
cgcatgttgtactacctgaaacaggaagtcattggagaacatgttgattctatacttgga
ggtgttgatttcagggatattgatatttggttgcctgagatggaacaacaagatgttcca
tcaggctggtgggatgcagaggctgaccgttgtttgcttattggggtatttaaacatgga
tatgaaatgtacactaccatgcgggctgatccctttttgtgttttttggaacgatgtggt
tgtcctgatgacaaggacataaaggctgaacagcattcagtagatcctgatctgagagag
ggaggcaactatgacaagtattcagaggacccagagtttaaacctgtattgagagacagc
aaagaagtttatgaggagagttctgaccctcagaatttggatgagctctttatacaggac
aactccactcctatgccagaagtagtacaaccctcaggatctgtagggacctggtactgg
ccaacaagctcatcactcacagctcgtcttaggcggctaatcacagcataccagcgcagc
tacagacgagagcagctgaagatggaagcggcagaaaaaggtgacaggcgacgccgtcgc
tgtgagcaggccactaaactcaaagagcttgcacgacaagagcgacaacagaggtggact
cggcgagaagagtgtgacttttatcgagttgtgtccacttttggtgtagagcaaataaag
actgaggttggagcccaaaagtgtgtggagggcaaactggactggacacactttcgaaag
tttgcaagacttgataaaaaaacagatgagagtcttaatcaatacttccactgctttgtg
gccatgtgtcgaagggtctgtcgcttgcagccagcccatggagaggaatccccagacttg
tccaagtctttagctcccatcacagaggagcgagcctcacgtacactttaccgactcggc
ttgttgtctcgattgcgtgaacttgttctttcccacccttccttggaagagcggcttctt
cttgcaccacccagttctgacctgcccagctggtggtgcaccccacaacatgatcatgaa
ctgctcttaggtgctgctcgttggggcgtaagccgcacagagcactccatctttttagac
caacaattctccttcctcaaagcttttcgtgactatctccaaagccagcaaactactctt
gttgaagagatttatggccatggtctaacacaagatcaaacaaaagtcaaagatttaagg
caaagtagtaaagagattcagctttttgactcaatttcagagtcagacacttcagccttt
tcatattttgaaggcaaaaatagaaggccggtaggctgggactgtaagaaaagcaaagac
agaagatccaggggaaatgaaaaagaacaagaagaaacaggtggaggagggccatcagat
tcagactcagattctgactctgattcctctatctcctctcacttttctcacagctcagat
gccagtggggacagtgatgctgaggatgagcaggatgacttaaagatgtgcaatgtgtat
gaagagaacagcacccactcacttacaccttcccaagatggcacacccccagacattata
agtgacccactaagagtcaactggcctaaggatcgtgtgttaataaaccgaattgacaaa
ctctgttctctggttctgactggacactggccttctggacgtcggtacactttagaatct
cagtattccctgacttgtgataaacaggggcctggtgaaaatctgggctacgctcgtgta
tctcgcaaaggcaatgacattctacctggacaggatacagaatttactgtcaagctcttg
aaagaggaaggactgaagttaacattttctaaacaatctttaattcctaatgggtcagca
ggagaggcaagtggacgtcaagggcacaaaggaaaggagtcaacagttacagatgctcct
cgtaaaagggacctgcccagctggcttaaggaaaatccagactatgaggtggagggtgat
atgctagaactactggtgaacaggaccaaaaggaaaaggagaaaaaagaagacaggaagg
gaaggaggactaacaggcagtcagaaggttaaggtcatagacatgcgaactggcaaaaag
tgtgatggagaacgtgcacctgcactgcaagatctgaaaaattatcttacagaaaatcct
caccatgctgttgctcccgaatgggcagatactgttcgtaactcgggccttctgccagaa
catttctttcacagacttttgactctgcattcctcggaccgcaaaaccagccatcataca
actttaacccaatctgaccctcttctgggaggagatgagcgtgagatgttgatttcagat
gggcctttcataatggaccatgaagatctaaatagcgatgaccttacttgtcgccacttc
ctgacatctgcatatgacacaaagagagaggatggctccagtgacgtggacaaaggagat
ggtttgtcacagattgtgtatgatggctctagtagagaggcttttttagatgatatcatt
atggcacctaaaaattcagattcttcttcaaacttacaatattga
DBGET
integrated database retrieval system
