Trichomycterus rosablanca: 134312214
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Entry
134312214 CDS
T09921
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
KO
K24495
myomesin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134312214 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134312214 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
134312214 (myom1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
Pur_ac_phosph_N
C2-set_3
HTH_34
B-CoV_A_NSP1
Motif
Other DBs
NCBI-GeneID:
134312214
NCBI-ProteinID:
XP_062850023
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Position
4:complement(21377915..21436669)
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AA seq
1465 aa
AA seq
DB search
MSGSTKVHQEQQQQLQQRQTLETHYESSYHQSSLSSFSHLSYATQMTSKGVKVKASTKKQ
EKKLSSLPKTHKCACLALDEMDAVIGYVVPVCKSSHLATKELMESQQEKKEEGVGYVVMK
NLFSRDSEYEIKLVKKSHSKIIRESAEKLTLSKKIVEKQEFHKKMNRDSLTHPPEFMVKP
RGQTIWEGKSVTLHCTVAGWPKPRAAWYKNNVLIDAKAHPEKYTTESNYNMHSLEIKNCD
FNDTAEYRISALNVKGESSAFSSVIIKRFREDEVTDRPHGYSPEYGVTFRTTIVDKFEVA
FGSEGDTMSLGCLVIVYPTVKRYQPEVVWYRNDVALAPSKWVQMHWSGTRATLTLVHLNK
EDEGLYTLRVNTKSGFESYSAYVFVRDADLDIEGVPVAPLDVRCHDANKDYVVVTWRQPA
VEGSSPILGYFIDRCEVGTHHWTQCNDTPVKYARFPVTGLIEGRSYIFRVSAINMFGVSH
PSRVSDPVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVIPGSPTDLAVTEATKSYV
VLSWKPPVQRGHEGIMYYVEKCMVGADTWQRVNTGMPVKSPRYALFDLAEGKSYSFRVRC
CNSAGVSEPSEETEPTTVGDRLDLPSAPGPVVAIRNTATSVTVIWGASKGDQKLLRYYID
VSVVGSNVWVPCNNKPVKGTRFVCHGLNTGDNCVFRVKAVNSAGYSTHSSESEACLVVAA
IEVPAPPSALTLVERVRDYMVLSWQSPAKTGGADIRGYYLDYRTVKGKVTSRWHEINTKA
ITGTSYKVEDLKENTLYQFQVRAVNQAGISEASVASVAFECKEWTVAVPGPPHGLHVLEV
RKDSMVLLWEPPTFDGRSPVTGYYVDIKEEKGRWRGVQDRSTKDTFLQISGLKEGVSYLL
RVHAKNISGVGGPSKSTEPILTQTRPGTNEIVVDVDDDGVISLIFECSKLAADSQFVWSK
NYKAFTDSSRLTIETVGGKSRAIFNDPSLEDLGIYSCVVTNTDGVSASYTLTEEELKRLL
EISHDHKFPIIPFKTEMAVELQEKGRVRFWAHVGKFTSNCHVNYVFNENIITQGKKYTMN
FDKNTGIIELFMDSLEVTDEGTFTFDLVDGKATGRTSLVLIGEEFAELQKKSEFERAEWV
RRQGPHFVDYLSFEVTSECDVYLKCKVGNIRANTEIIWFKDGIEIEEGDEDAKKIGIADG
VLSFNIGKLSKKDAGVYEVTLQDERGKDKTLLNLTNEGYQAVLNEMFRVIANSSTELKVQ
STEHGIILHSFVVYHTEELPVGWLHKESKISYSERVKCGVTGEQLWLKINEPTEKDKGKY
AVDIFDGKGSVRRVLDLTGQVWEEAYAEFQRLKAAAIAERNRARVIGGLPDVVTIQEGKS
LNLTGNVWGDPTPEVSWLKNVKELRADDHITLKFEHGKFASITIAAVSTTDSGKYALLVK
NKYGTEAGEFTVSVYIPEDENEKKE
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatctaccaaagtgcaccaggagcagcagcagcagctgcagcagcggcagact
ctggagacacactatgagagcagctatcaccaaagctcactgtcatcctttagccacctg
tcttacgccactcaaatgaccagcaagggggtaaaggtgaaggcatccactaagaagcag
gagaagaaacttagctctctacccaagactcacaagtgtgcctgcctggcactggatgaa
atggacgcggtcataggatacgtggtacctgtttgtaaaagcagtcatttagccacaaag
gagctgatggagagccagcaggagaaaaaagaagagggtgtgggctacgtggtcatgaag
aacctcttctccagagactctgaatatgaaattaaactagtgaagaagagccacagtaag
atcataagggagtctgctgagaaacttacgctgagcaaaaagattgtagagaagcaggag
ttccataagaagatgaacagggacagtctaactcatcctcctgaattcatggtaaagcct
cgcggtcagaccatctgggaaggcaagagtgttaccctgcactgcactgtagccggttgg
cccaaaccccgtgccgcttggtacaaaaataatgtgctcatcgatgccaaggctcaccca
gaaaaatacaccaccgaaagcaattacaacatgcactctctggagattaagaattgtgat
ttcaatgatacggctgagtatcgtatctcagctctcaatgtgaaaggcgagagctctgcc
ttttcctctgtcatcattaaaagatttagggaagatgaagtaactgacagaccacatggt
tacagtcctgaatatggtgtcacctttagaaccaccatagttgataagtttgaagttgct
ttcggcagcgagggagataccatgagtttgggctgcttagtcattgtgtaccctactgtg
aaacgctaccaacctgaggtggtctggtacagaaacgatgttgccctggcaccctccaaa
tgggtacagatgcactggagtggcacacgggctaccctcacacttgtccatctcaacaaa
gaggatgaaggactgtacacactgcgtgttaacaccaagtcaggctttgaatcttactct
gcctatgtgtttgtcagagatgctgacctggacatagaaggggtccctgttgctcctctt
gatgtgagatgccatgatgctaataaggattatgtggtagtgacctggagacagcctgca
gtagagggcagcagccccattctcggctattttattgacaggtgtgaggttggtactcat
cactggacccagtgtaatgacaccccagtgaaatatgcccgttttccagttactgggctc
atcgaggggcgctcctacatcttccgggttagtgctatcaacatgtttggggtgagccac
ccttctcgtgtgtctgaccctgtagttgccatggacccgtccgaccgagcccgtctgaga
gctggtccttctgctccatggactggtatgattaaattcactgaggaggatcccacagtt
ggtgtcatccctgggtctcctactgatctggctgtgaccgaggccactaagagctatgtg
gtgctcagctggaagccccctgtgcagaggggacatgaggggatcatgtactatgtggag
aagtgtatggttggcgcagacacctggcagagggtaaacactgggatgcctgtgaagtct
cctcgctatgccctgtttgacctggctgagggcaaatcctacagcttccgtgtacgctgc
tgcaactctgcaggtgttagtgagccatcagaggaaactgaacccacaactgtcggagac
agactggacctgccatcagcaccagggcctgttgtggcgatcaggaacactgccacttct
gtcacggtgatctggggggcctctaaaggagatcaaaaattgctgcgctactacattgat
gttagcgtggtgggcagcaatgtgtgggttccatgcaacaacaaaccagttaagggcacc
aggtttgtgtgtcatggactgaacactggagataactgtgtgttcagagtgaaagcagtg
aactctgcagggtacagcactcactcctccgagtcagaagcctgcctggtggtagctgct
attgaggtgccagctccaccatctgcactgactctggtagagcgtgttcgtgactacatg
gtgctgagctggcagtctcctgctaaaaccggtggagctgatatcaggggctactatttg
gactacaggactgttaagggcaaagtcactagcaggtggcatgaaatcaacaccaaggcc
attactggaacatcctataaggtagaggacctgaaggagaatacactgtaccagtttcaa
gtacgtgcagttaaccaggctggtataagcgaggcctctgtagccagtgttgcctttgag
tgtaaagaatggacggtcgccgtgccaggacctcctcatggtcttcatgttctggaggta
cgaaaggactcaatggtgctgttgtgggagccgcctacattcgacggccgcagtcctgtt
actggttactatgtggacatcaaggaggagaaaggcagatggagaggtgttcaggaccgg
tccaccaaagacaccttcttgcagatctctgggctaaaggaaggtgtgtcctaccttctg
cgtgttcatgccaagaatatatcaggtgttggtggaccctccaaatctacagaacccatt
ctcactcaaacccgtccaggcactaatgagattgttgtggatgttgatgatgatggcgtg
atctcactgatctttgagtgctccaagctggctgcagattctcaatttgtgtggtccaag
aactacaaggcctttaccgatagctctcgtctcaccatcgagacagtcggcggaaaatca
agagccatctttaatgacccttcacttgaggacttgggcatctactcctgtgtggtcaca
aacacagatggggtttctgccagctacacactaacagaggaggaactgaagcgcttgctg
gagatcagccatgaccataagtttcccattattcctttcaagactgaaatggccgttgag
cttcaggagaagggtcgtgtgcgtttctgggcccatgttggcaagtttacttccaattgt
catgtgaattacgtcttcaatgaaaacatcatcactcaaggaaagaaatacacaatgaac
tttgacaagaacaccggtataattgagctgttcatggactcattggaggtcactgatgaa
ggaactttcacgtttgaccttgttgatggcaaagctacaggtcgaaccagcctggtgctt
attggagaagagtttgctgagcttcagaagaaatctgagtttgagagagctgagtgggtc
aggagacaaggtccccactttgtggactacctcagcttcgaagtcacctccgaatgtgac
gtttacctgaaatgcaaggttggaaatattagagctaacacagagataatctggtttaaa
gatggaatcgagatcgaagagggtgacgaagatgctaagaaaattggcattgctgatgga
gtgctgtccttcaacattggcaagctttcaaagaaggatgcaggtgtctatgaggtcaca
ctgcaggacgagagaggaaaggataagaccttgttgaatctgactaatgaagggtatcag
gctgtgctcaatgaaatgttcagagttatagccaactcttctactgagctgaaggttcag
agcaccgagcatggaattattctccattcatttgttgtgtaccacactgaggagcttcct
gttggctggctccacaaagagtccaagatctcctactcagaaagagtgaaatgtggagtc
acgggagagcagctgtggctgaaaatcaatgagcctacagagaaagacaagggcaagtat
gctgtcgacatctttgatggaaaaggcagcgtcaggagagttcttgaccttactggacaa
gtatgggaagaggcgtatgcagagtttcagaggctgaaggctgcagccatcgcagagaga
aaccgggctcgtgtgattggaggtctgccagatgtagtgactatccaggagggcaagtct
ctgaacctcaccggaaatgtgtggggcgatcctacgcctgaagtcagctggctgaaaaat
gtcaaggagctgagagctgatgatcacatcacactcaagttcgagcatggcaagtttgcc
agcatcactatcgctgcagtcagcacaactgactcgggcaagtacgccctactggtgaag
aacaagtatggcacagaggctggcgagtttacagtcagcgtctacatcccagaggatgag
aatgagaagaaggagtaa
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