Trichomycterus rosablanca: 134312239
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Entry
134312239 CDS
T09921
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134312239 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134312239 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
134312239 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Ig_J_second
C2-set_3
Ig_CD22
Ig_VEGFR-1-like_5th
STT3_PglB_C
Motif
Other DBs
NCBI-GeneID:
134312239
NCBI-ProteinID:
XP_062850087
LinkDB
All DBs
Position
4:complement(23743707..23808019)
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AA seq
1718 aa
AA seq
DB search
MSGSLPFYQKHHRHYDRAYRSREAESAVSHYQQSSSTYSAHRTSSKGITDTALASVGESR
LSPLPKRSKPTYLAVDKENQIIGYVVPIFRGSQEFASGLSDTEEARAKESAAYLARRDLF
SSGVEMERKSHRTVMRQSAEHISLTKRIHESEEYHKRLNEDNLMHTPEFVIKPRSHTVWE
KQCVRLHCTVTGWPEPRIVWYKNNVSIDPMANPGKYKLVSSYNVHSLEINRCDFDDTAQY
RVSAMNSKGELSAFASVVVKRFKGEVDESLPTPRLLPCLEYGVTFETHIVEKFGVSFGCE
GETMSLGCSVIIYPMLQRFQPEIEWYRDDKLLVPSKWVQMHWSGNRATLTLTHLNKEDEG
LYTLRVITKSSFESHSAYVFVRDSDAELEGAPGAPLDVFCQDANKDYVIVTWKQPAVDGG
SSILGYFVDRCEVGTTHWIQCNDTPVKFARFPVTGLVEGRSYTFRVRAVNKCGMSYPSRV
SEPVAAMDPADRARKGTSAPWTGQIIVTEEEPVEGVVPGKPRELMVIESTKTYVVLSWKP
PGEKGLEGVMYYVEKCVAGTDSWQRVNTEIPVKSPRFALFDLSEGKSYHFRVRCCNSAGV
GEPSEPTKATIVGDKLDIPSAPGRVIPTRNTDTSVVVSWEASREVKELVGYYIEASIAGS
NVWEPCNNKPVKATRFVCHGLKTEEMYVFRVRAVNAAGISEFSQESEAIKVKAAIGGGIP
HGVFLDSGGNKVGLTQHRPDEEGRHAPPRPPATTLLTSLANVNERVNSTGPQKGGNRGNV
TWAPEPSFEPGCQLGTSLNTNINDVPDPSTKTEMNSKPGKNLGIRTATEPGIDSDPKTSG
NTGVHLNSKTDTESGTELNTNIGAQSGSNLNNKTGTKTLKMKSNTKSGANLESKADAELC
TTSNTKTNTEPSTNSNTKANAAEPVSENAAHTSIEGIKEPTTELHKGTQAKRKSSVEPSL
EQGQEQERDKGRRGSASPAPPYGITVLECVRDSMVLGWKQPTFIGGADIIGYFVDYREII
DGVHGKWHEANIKSVSERAYRVSDLKENMLYQFQVRAANMAGVGIPSLPSQTFKCEEWTI
AVPGPPHDLQVLEVRKDSLVLLWKSPVYQGRDQVNGYYVDIKEAEADFEKWRGVNEKATS
KTYMKIKDLKEGVSYVFRVRAQNKAGVGKASEATEPVLAETKPGTMEMVVEVDDDGVISL
NLECNNLTADSKFVWSKNYEEIKDSTRLTMETKGNKSKAIFNSPSEDDLGIYSCVVTHTD
GVSASYILTEEGLKDLLKISHEHKFPVIPLKSELAVELLEKGRVRFWLQAEKISANGKVE
YVFNDNMISQGEKYKMNFDKNTGVIEMFMESLEKVDEGTFTFQLQDGKATNQSSLVLIGD
AFKQLQKESEFQKKEWHRKQGPHFVEYLGYEVTPECTVKLNCKVGNMKKESMAIWYKDGR
EIKADEKLNFSEGVLTLEIAQISKKDAGVYEVVVKDDRGQDKSTLNLTDQGFKDLMNQVF
SVIANSSTALKIQSTEEGIRLYTFVSYYNDELLVTWQHKDAAIAFSDRIKSGVVGEQLWL
QISEPTEKDKGKYAIEFSDGKGGLKRTIELAGQAYDDAYAEFQRLKAAAIAERNRARVAG
GLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFDSGKFASFTISKV
NSNDSGKYSILVKNKYGTESGEFTVSVFMPDEMPVKKK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcattgccattctaccaaaagcaccaccgtcattatgaccgtgcttaccgt
agccgggaggcggagtctgcagtcagccactaccagcagagctccagcacttactctgct
cacagaaccagctcaaaaggcatcacagatactgccttggcatctgtgggtgagtcaagg
ctgagtcccctgccaaagagatccaagcctacctacctggccgtggacaaagagaaccag
attataggctatgtggtgcccatcttcaggggaagccaggaatttgcaagtggtctgtca
gacactgaggaggctcgggctaaagagagcgctgcctacctggcacgtagagacctcttc
agcagtggggttgagatggaacgcaagtctcacagaaccgtcatgaggcaatcagcagag
cacatttccctcaccaagaggatccatgagagcgaagagtaccataagcgtctgaacgag
gataacctaatgcataccccagagtttgtgatcaagccgcgctcacacactgtgtgggaa
aaacagtgtgtgcggctgcactgcaccgttacaggatggcctgagccacgaattgtgtgg
tataaaaacaatgtcagcattgatcccatggctaaccctggaaagtacaaattagtgagc
agctacaatgttcactctctggaaatcaacaggtgtgactttgatgacacggcgcagtat
cgtgtgtctgccatgaacagcaagggggagctttcagcttttgcatcagtcgttgttaaa
agattcaaaggtgaagttgatgagtctctcccaactcccagactattgccctgccttgag
tatggagtgactttcgaaacccatattgtggagaagtttggtgtgtccttcgggtgtgag
ggagagactatgagtctgggctgctctgttatcatctacccaatgctgcagcgcttccag
cctgagattgagtggtacagagatgataagctgctggtgccatcgaagtgggttcagatg
cactggagtggaaacagagccacactgacgctcacacaccttaacaaagaggacgaagga
ctgtacacactccgagtcatcacaaagtctagctttgagtcacattcagcctatgtcttc
gtccgagattctgatgcagagcttgaaggggccccaggtgctccactagatgtgttttgt
caggatgctaataaagattatgtcattgttacatggaaacagcctgctgtggatggaggc
agctccattctgggctatttcgtggacaggtgtgaagttggcaccacacactggattcag
tgcaatgacactccagttaagtttgcccgctttcctgttaccggcttggtcgaaggccgc
agctatactttccgtgtgcgtgctgtgaataagtgtggcatgagttatccctctcgggtg
tccgaacctgtggcagccatggaccctgctgaccgtgcacgcaaaggaacctctgctcct
tggactggacagatcattgtgactgaggaggagcctgttgagggtgtggttcctggcaaa
cctcgtgagctgatggttattgagtccactaagacctatgtggtgctgagctggaagccc
cctggcgagaagggacttgagggggtcatgtactatgttgagaagtgtgtcgctggtaca
gacagctggcagcgtgtgaacactgagattccagtgaagtctccacgctttgcactgttt
gacttgtctgagggcaaatcttaccatttccgtgtccgctgctgtaactctgccggtgta
ggtgaaccttcagaacccacaaaagccactatagttggagataagctagacatcccatca
gctccaggccgtgtcattcccacccggaacacagacacgtccgttgttgtgtcatgggag
gcatcacgtgaggttaaagaactggtgggctactacattgaggccagcattgctggaagc
aatgtgtgggagccctgtaacaacaagcctgtcaaagccaccaggtttgtatgtcatggc
ctgaaaacagaagagatgtatgttttccgtgtaagagctgttaacgctgctggaatcagt
gagttctcacaggagtctgaagctatcaaagttaaagctgccattgggggcggcattcct
catggtgtgtttctggattcagggggtaacaaagtcggactaacccagcacaggccagat
gaggagggcaggcatgcgccccctcgtcctcctgctaccacgctgctaacttccctagct
aatgttaatgaaagggtcaatagcacaggccctcaaaaaggaggaaacagaggcaatgta
acctgggcacctgaacccagctttgaacccggttgtcagttgggtaccagtttaaacact
aacataaacgatgtaccagaccccagtacaaaaaccgaaatgaactctaaacctggcaag
aatttaggtatcagaaccgccacagaacctggtatcgattcagacccaaaaacaagcggt
aatactggtgtccatttaaacagcaagacagacactgaatctggcactgaattaaacacc
aacataggtgctcaatctggcagcaatttaaacaacaaaactggcactaagactttaaaa
atgaagtcaaacactaaatctggtgccaatttagaaagcaaagctgacgctgaattatgt
accacttcaaataccaaaacaaacactgaaccaagtaccaattcaaacaccaaggcaaac
gctgctgagccggtgtctgagaacgctgctcacacctccattgaaggaataaaggagccc
acgactgaactgcataagggaacgcaagcaaaacgtaagtcctcagtagagccttctctg
gaacaagggcaagagcaagaaagagataaagggcgcagaggttcagcatcccctgctcca
ccatatggtatcactgtactggagtgtgtacgggattcaatggtgctaggctggaagcag
ccaaccttcatcggcggtgctgacatcatcggttactttgtggattaccgtgagatcata
gatggagttcatggaaaatggcatgaggctaacatcaagtcagttagtgagcgagcctat
agggtctcagacttgaaggagaacatgttgtaccagttccaggttcgtgctgcaaatatg
gctggtgtgggcatcccatctctgcccagccaaacctttaaatgtgaagagtggaccatt
gctgtaccaggtcccccacatgacctacaagtacttgaggtgcgtaaggactcgttggtg
ttgctgtggaaatcaccagtgtaccagggtcgagaccaggtcaacggctattacgtcgac
atcaaggaggccgaggcagattttgaaaaatggagaggagttaatgagaaagccacaagc
aagacgtacatgaagattaaagatctgaaagagggggtgtcctatgttttccgtgtacga
gcacagaacaaagctggtgtgggcaaagcctctgaggcaacagagccagtgcttgctgaa
actaaaccaggcactatggagatggttgtggaggttgatgatgatggtgtgatatcactg
aacttggaatgtaataatcttactgctgactccaagttcgtctggtccaagaattatgag
gagattaaagactctacacgcctcacaatggagaccaagggcaacaagtccaaagccatc
tttaacagtccttctgaggatgacctgggaatttactcctgtgttgtcacccacactgat
ggagtctctgcaagctatatcctcactgaagagggactaaaggacctgctgaagatcagc
catgagcacaaattccctgttattcctttgaagtcagagctggctgtggagcttttggag
aaaggtagggttcgattttggctgcaggctgagaagatttctgcaaacggcaaagttgaa
tatgtctttaatgacaacatgatttctcagggagagaaatacaagatgaactttgataaa
aatactggtgtcattgaaatgtttatggagtcactggagaaagtggatgaaggaacattt
actttccaacttcaggatggcaaagccaccaaccagtccagcctggtgcttataggagac
gcatttaaacagttgcagaaagaatctgagttccagaaaaaagaatggcacaggaaacaa
ggtccccactttgtagagtatcttggttatgaggtcacacctgagtgcactgtaaaactg
aattgcaaggttggtaacatgaagaaggaatctatggcaatatggtataaagatggaaga
gagattaaggctgatgagaaactgaatttctctgagggagtgctgacactggaaattgcc
cagatctctaagaaggatgctggcgtatatgaggtggtcgtgaaagatgacagaggccaa
gacaaatccacacttaacctgactgaccaaggcttcaaggacctgatgaatcaagtattt
agtgttattgctaactcctccactgctctgaagatccagagcactgaggagggcatccgc
ctctacacatttgtcagctattacaacgatgaactgcttgtcacctggcaacacaaggat
gctgctattgccttctctgatcgtattaagagtggtgtggtgggtgaacagctgtggctg
cagatctctgaaccaacagaaaaagacaagggcaagtacgccattgagttctctgatgga
aaaggaggattgaagagaacaattgagctagctggtcaagcatatgatgatgcctatgca
gaatttcaaagactcaaagcggcagccattgcagaaagaaatcgtgctcgtgtggccgga
ggactgcctgatgtggtgaccatccaagagggcaaggctttgaatctgacatgtaacatc
tctggagatccagtgcctgaggtgacttggctgaagaatgagagagaaatggtgtctgat
gaccactacatccttaaattcgactctggcaagtttgccagcttcaccatcagcaaagtg
aactcaaacgactccggaaagtacagcatccttgtaaagaacaagtacggtacagagagt
ggcgagtttaccgtaagtgtctttatgcctgatgaaatgcccgtcaagaaaaagtag
DBGET
integrated database retrieval system