KEGG   Trichomycterus rosablanca: 134312239
Entry
134312239         CDS       T09921                                 
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
  KO
K24495  myomesin
Organism
trn  Trichomycterus rosablanca
Pathway
trn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:trn00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134312239 (myom1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:trn04990]
    134312239 (myom1b)
Domain-containing proteins not elsewhere classified [BR:trn04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   134312239 (myom1b)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_2 Ig_DSCAM-DSCAML_C ig V-set Pur_ac_phosph_N Tissue_fac Ig_J_second C2-set_3 Ig_CD22 Ig_VEGFR-1-like_5th STT3_PglB_C
Other DBs
NCBI-GeneID: 134312239
NCBI-ProteinID: XP_062850087
LinkDB
Position
4:complement(23743707..23808019)
AA seq 1718 aa
MSGSLPFYQKHHRHYDRAYRSREAESAVSHYQQSSSTYSAHRTSSKGITDTALASVGESR
LSPLPKRSKPTYLAVDKENQIIGYVVPIFRGSQEFASGLSDTEEARAKESAAYLARRDLF
SSGVEMERKSHRTVMRQSAEHISLTKRIHESEEYHKRLNEDNLMHTPEFVIKPRSHTVWE
KQCVRLHCTVTGWPEPRIVWYKNNVSIDPMANPGKYKLVSSYNVHSLEINRCDFDDTAQY
RVSAMNSKGELSAFASVVVKRFKGEVDESLPTPRLLPCLEYGVTFETHIVEKFGVSFGCE
GETMSLGCSVIIYPMLQRFQPEIEWYRDDKLLVPSKWVQMHWSGNRATLTLTHLNKEDEG
LYTLRVITKSSFESHSAYVFVRDSDAELEGAPGAPLDVFCQDANKDYVIVTWKQPAVDGG
SSILGYFVDRCEVGTTHWIQCNDTPVKFARFPVTGLVEGRSYTFRVRAVNKCGMSYPSRV
SEPVAAMDPADRARKGTSAPWTGQIIVTEEEPVEGVVPGKPRELMVIESTKTYVVLSWKP
PGEKGLEGVMYYVEKCVAGTDSWQRVNTEIPVKSPRFALFDLSEGKSYHFRVRCCNSAGV
GEPSEPTKATIVGDKLDIPSAPGRVIPTRNTDTSVVVSWEASREVKELVGYYIEASIAGS
NVWEPCNNKPVKATRFVCHGLKTEEMYVFRVRAVNAAGISEFSQESEAIKVKAAIGGGIP
HGVFLDSGGNKVGLTQHRPDEEGRHAPPRPPATTLLTSLANVNERVNSTGPQKGGNRGNV
TWAPEPSFEPGCQLGTSLNTNINDVPDPSTKTEMNSKPGKNLGIRTATEPGIDSDPKTSG
NTGVHLNSKTDTESGTELNTNIGAQSGSNLNNKTGTKTLKMKSNTKSGANLESKADAELC
TTSNTKTNTEPSTNSNTKANAAEPVSENAAHTSIEGIKEPTTELHKGTQAKRKSSVEPSL
EQGQEQERDKGRRGSASPAPPYGITVLECVRDSMVLGWKQPTFIGGADIIGYFVDYREII
DGVHGKWHEANIKSVSERAYRVSDLKENMLYQFQVRAANMAGVGIPSLPSQTFKCEEWTI
AVPGPPHDLQVLEVRKDSLVLLWKSPVYQGRDQVNGYYVDIKEAEADFEKWRGVNEKATS
KTYMKIKDLKEGVSYVFRVRAQNKAGVGKASEATEPVLAETKPGTMEMVVEVDDDGVISL
NLECNNLTADSKFVWSKNYEEIKDSTRLTMETKGNKSKAIFNSPSEDDLGIYSCVVTHTD
GVSASYILTEEGLKDLLKISHEHKFPVIPLKSELAVELLEKGRVRFWLQAEKISANGKVE
YVFNDNMISQGEKYKMNFDKNTGVIEMFMESLEKVDEGTFTFQLQDGKATNQSSLVLIGD
AFKQLQKESEFQKKEWHRKQGPHFVEYLGYEVTPECTVKLNCKVGNMKKESMAIWYKDGR
EIKADEKLNFSEGVLTLEIAQISKKDAGVYEVVVKDDRGQDKSTLNLTDQGFKDLMNQVF
SVIANSSTALKIQSTEEGIRLYTFVSYYNDELLVTWQHKDAAIAFSDRIKSGVVGEQLWL
QISEPTEKDKGKYAIEFSDGKGGLKRTIELAGQAYDDAYAEFQRLKAAAIAERNRARVAG
GLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFDSGKFASFTISKV
NSNDSGKYSILVKNKYGTESGEFTVSVFMPDEMPVKKK
NT seq 5157 nt   +upstreamnt  +downstreamnt
atgtcgggatcattgccattctaccaaaagcaccaccgtcattatgaccgtgcttaccgt
agccgggaggcggagtctgcagtcagccactaccagcagagctccagcacttactctgct
cacagaaccagctcaaaaggcatcacagatactgccttggcatctgtgggtgagtcaagg
ctgagtcccctgccaaagagatccaagcctacctacctggccgtggacaaagagaaccag
attataggctatgtggtgcccatcttcaggggaagccaggaatttgcaagtggtctgtca
gacactgaggaggctcgggctaaagagagcgctgcctacctggcacgtagagacctcttc
agcagtggggttgagatggaacgcaagtctcacagaaccgtcatgaggcaatcagcagag
cacatttccctcaccaagaggatccatgagagcgaagagtaccataagcgtctgaacgag
gataacctaatgcataccccagagtttgtgatcaagccgcgctcacacactgtgtgggaa
aaacagtgtgtgcggctgcactgcaccgttacaggatggcctgagccacgaattgtgtgg
tataaaaacaatgtcagcattgatcccatggctaaccctggaaagtacaaattagtgagc
agctacaatgttcactctctggaaatcaacaggtgtgactttgatgacacggcgcagtat
cgtgtgtctgccatgaacagcaagggggagctttcagcttttgcatcagtcgttgttaaa
agattcaaaggtgaagttgatgagtctctcccaactcccagactattgccctgccttgag
tatggagtgactttcgaaacccatattgtggagaagtttggtgtgtccttcgggtgtgag
ggagagactatgagtctgggctgctctgttatcatctacccaatgctgcagcgcttccag
cctgagattgagtggtacagagatgataagctgctggtgccatcgaagtgggttcagatg
cactggagtggaaacagagccacactgacgctcacacaccttaacaaagaggacgaagga
ctgtacacactccgagtcatcacaaagtctagctttgagtcacattcagcctatgtcttc
gtccgagattctgatgcagagcttgaaggggccccaggtgctccactagatgtgttttgt
caggatgctaataaagattatgtcattgttacatggaaacagcctgctgtggatggaggc
agctccattctgggctatttcgtggacaggtgtgaagttggcaccacacactggattcag
tgcaatgacactccagttaagtttgcccgctttcctgttaccggcttggtcgaaggccgc
agctatactttccgtgtgcgtgctgtgaataagtgtggcatgagttatccctctcgggtg
tccgaacctgtggcagccatggaccctgctgaccgtgcacgcaaaggaacctctgctcct
tggactggacagatcattgtgactgaggaggagcctgttgagggtgtggttcctggcaaa
cctcgtgagctgatggttattgagtccactaagacctatgtggtgctgagctggaagccc
cctggcgagaagggacttgagggggtcatgtactatgttgagaagtgtgtcgctggtaca
gacagctggcagcgtgtgaacactgagattccagtgaagtctccacgctttgcactgttt
gacttgtctgagggcaaatcttaccatttccgtgtccgctgctgtaactctgccggtgta
ggtgaaccttcagaacccacaaaagccactatagttggagataagctagacatcccatca
gctccaggccgtgtcattcccacccggaacacagacacgtccgttgttgtgtcatgggag
gcatcacgtgaggttaaagaactggtgggctactacattgaggccagcattgctggaagc
aatgtgtgggagccctgtaacaacaagcctgtcaaagccaccaggtttgtatgtcatggc
ctgaaaacagaagagatgtatgttttccgtgtaagagctgttaacgctgctggaatcagt
gagttctcacaggagtctgaagctatcaaagttaaagctgccattgggggcggcattcct
catggtgtgtttctggattcagggggtaacaaagtcggactaacccagcacaggccagat
gaggagggcaggcatgcgccccctcgtcctcctgctaccacgctgctaacttccctagct
aatgttaatgaaagggtcaatagcacaggccctcaaaaaggaggaaacagaggcaatgta
acctgggcacctgaacccagctttgaacccggttgtcagttgggtaccagtttaaacact
aacataaacgatgtaccagaccccagtacaaaaaccgaaatgaactctaaacctggcaag
aatttaggtatcagaaccgccacagaacctggtatcgattcagacccaaaaacaagcggt
aatactggtgtccatttaaacagcaagacagacactgaatctggcactgaattaaacacc
aacataggtgctcaatctggcagcaatttaaacaacaaaactggcactaagactttaaaa
atgaagtcaaacactaaatctggtgccaatttagaaagcaaagctgacgctgaattatgt
accacttcaaataccaaaacaaacactgaaccaagtaccaattcaaacaccaaggcaaac
gctgctgagccggtgtctgagaacgctgctcacacctccattgaaggaataaaggagccc
acgactgaactgcataagggaacgcaagcaaaacgtaagtcctcagtagagccttctctg
gaacaagggcaagagcaagaaagagataaagggcgcagaggttcagcatcccctgctcca
ccatatggtatcactgtactggagtgtgtacgggattcaatggtgctaggctggaagcag
ccaaccttcatcggcggtgctgacatcatcggttactttgtggattaccgtgagatcata
gatggagttcatggaaaatggcatgaggctaacatcaagtcagttagtgagcgagcctat
agggtctcagacttgaaggagaacatgttgtaccagttccaggttcgtgctgcaaatatg
gctggtgtgggcatcccatctctgcccagccaaacctttaaatgtgaagagtggaccatt
gctgtaccaggtcccccacatgacctacaagtacttgaggtgcgtaaggactcgttggtg
ttgctgtggaaatcaccagtgtaccagggtcgagaccaggtcaacggctattacgtcgac
atcaaggaggccgaggcagattttgaaaaatggagaggagttaatgagaaagccacaagc
aagacgtacatgaagattaaagatctgaaagagggggtgtcctatgttttccgtgtacga
gcacagaacaaagctggtgtgggcaaagcctctgaggcaacagagccagtgcttgctgaa
actaaaccaggcactatggagatggttgtggaggttgatgatgatggtgtgatatcactg
aacttggaatgtaataatcttactgctgactccaagttcgtctggtccaagaattatgag
gagattaaagactctacacgcctcacaatggagaccaagggcaacaagtccaaagccatc
tttaacagtccttctgaggatgacctgggaatttactcctgtgttgtcacccacactgat
ggagtctctgcaagctatatcctcactgaagagggactaaaggacctgctgaagatcagc
catgagcacaaattccctgttattcctttgaagtcagagctggctgtggagcttttggag
aaaggtagggttcgattttggctgcaggctgagaagatttctgcaaacggcaaagttgaa
tatgtctttaatgacaacatgatttctcagggagagaaatacaagatgaactttgataaa
aatactggtgtcattgaaatgtttatggagtcactggagaaagtggatgaaggaacattt
actttccaacttcaggatggcaaagccaccaaccagtccagcctggtgcttataggagac
gcatttaaacagttgcagaaagaatctgagttccagaaaaaagaatggcacaggaaacaa
ggtccccactttgtagagtatcttggttatgaggtcacacctgagtgcactgtaaaactg
aattgcaaggttggtaacatgaagaaggaatctatggcaatatggtataaagatggaaga
gagattaaggctgatgagaaactgaatttctctgagggagtgctgacactggaaattgcc
cagatctctaagaaggatgctggcgtatatgaggtggtcgtgaaagatgacagaggccaa
gacaaatccacacttaacctgactgaccaaggcttcaaggacctgatgaatcaagtattt
agtgttattgctaactcctccactgctctgaagatccagagcactgaggagggcatccgc
ctctacacatttgtcagctattacaacgatgaactgcttgtcacctggcaacacaaggat
gctgctattgccttctctgatcgtattaagagtggtgtggtgggtgaacagctgtggctg
cagatctctgaaccaacagaaaaagacaagggcaagtacgccattgagttctctgatgga
aaaggaggattgaagagaacaattgagctagctggtcaagcatatgatgatgcctatgca
gaatttcaaagactcaaagcggcagccattgcagaaagaaatcgtgctcgtgtggccgga
ggactgcctgatgtggtgaccatccaagagggcaaggctttgaatctgacatgtaacatc
tctggagatccagtgcctgaggtgacttggctgaagaatgagagagaaatggtgtctgat
gaccactacatccttaaattcgactctggcaagtttgccagcttcaccatcagcaaagtg
aactcaaacgactccggaaagtacagcatccttgtaaagaacaagtacggtacagagagt
ggcgagtttaccgtaagtgtctttatgcctgatgaaatgcccgtcaagaaaaagtag

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