Trichomycterus rosablanca: 134312303
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Entry
134312303 CDS
T09921
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
trn
Trichomycterus rosablanca
Pathway
trn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134312303 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134312303 (sec24d)
Membrane trafficking [BR:
trn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
134312303 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
134312303
NCBI-ProteinID:
XP_062850215
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All DBs
Position
4:complement(30259051..30282812)
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AA seq
1038 aa
AA seq
DB search
MSQQGYVATPPYSQAQAGMGGYPTGFGPPHPQAHYGHYGATPQSFPAQPAGMLKPTASSP
SVMPAPPVSSHYGPSIQQNGAHPQKFPPPPAASAPVSSPYGQPPQRPYQSMPQTQQLTNQ
MSGMNLDGYAPNPMQLPQSPTSSAAPQSFQMSPSSAVGLPPMAAPGPQSPLMSACPPMAA
GCPPMAAGCPPMAVGPPPMAMPNSQPGPPPLVGMQQLAGPQGFPQQPGPYGGQMPGPPMA
GPQAGFPGGFPGGPNNLAGPPQKKLDPDDIPSTTQVIENDQARRGGQLYTTNLRGQVPPL
VTTSFTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFAKVPDNETPLYMVN
HGEPGPIRCNRCKAYMCPFMVFIDGGRRFQCGFCNCVNEVPVQYFQHLDHMGRRVDLYER
PELSLGSYEFTATLDYCKNNKPPSPPAYIFMIDVSYNNLKSGLVRLICEELKTLLDHLPK
EEGSESSAIKVGFVTYNKILHFYNVNSALAQPQMMVVSDVAEMFVPLLDGFLVNFQDSRA
VINNLLSQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFQSSLPTAEAPGKLK
NRDDRKLVNTEKEKTLFQPQRGVYEQLTKECVSQGCCVNLFLFPSQYVDVATMGDIPTHT
GGSVYKYSNFQVQVDGQHFLSDLRLDVKKSIGFDAIMRVRTSTGFRATEFFGSFHMNNTT
DVEMPAVDCDKTVTVEFKHDDTLNEETGALIQCALLYTSVSGQRRLRIHNLSLNCSSQLS
ELYKSCETDALINFFAKSAYNAVLNQPVRTVREILVKQTAHMLACYRKNCANPSTASQLI
LPDAMKVFPVYMNSLMKSPVLVGSAELCTDDRAFHRLSIMSMGVEETQILLYPQLIPVHT
MDMASESIPPAVRCSEERLSDTGMFLLENGQSLFLWLGQACPPDLIQNLFNVPSMAHLGP
DMTSLPELDNTYSRKLHFIISAISQQRSKSMKVVIVKQKDRSEMQLRQHLVEDEGLHGGA
SYMDFLCFVHREIRQLLT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgttgctacacctccatactcccaggcccaggctggaatgggg
ggataccccactggatttgggccccctcatccacaggcccattatggacactatggagct
acaccacagtcctttcctgctcaaccagcaggtatgctcaaaccgacagcctcttctccc
tctgtgatgcctgcaccacctgtgtctagtcattatggaccttctattcagcaaaatggc
gcacaccctcagaagtttcctccccctcctgcagcctctgcccctgtatcatctccttat
ggccagccccctcaaagaccataccaaagtatgcctcaaactcagcagttaaccaatcag
atgagtggcatgaaccttgatggatatgccccaaaccccatgcagctccctcagtcaccc
acctcatctgcagcaccacagtctttccaaatgtctccatcatcagcagtgggacttcca
cccatggctgcacccggccctcagtctcctttaatgagtgcatgtccacctatggcagca
ggatgtccacctatggcagcaggatgtccaccgatggcagttggccctccaccaatggca
atgcctaattcacagcctggccctcccccactggttggaatgcagcaactagctggacct
cagggatttccccagcaaccaggaccatatggagggcagatgccaggcccaccaatggct
ggacctcaggcaggttttccaggagggtttccaggaggacccaacaacttggctggacct
cctcagaaaaaactggacccagatgacattcctagcactactcaagtgattgaaaatgac
caggctagaagaggtggtcagctgtacaccacaaatctcaggggtcaagttcctccccta
gtaacgaccagttttactgttcaggatcaaggaaatgcaagccccaggtttatgcgctgt
actacctactcatttccctgcactgctgaccttgccaagcagtgccaagttcccctggct
accatcatcaaaccttttgccaaagtgcctgataatgaaactcctctgtacatggtaaat
cacggagagccaggacccatacgctgtaaccgctgtaaggcttatatgtgccccttcatg
gtctttatcgatggaggaagacgattccagtgtggtttctgcaactgtgttaatgaggtt
cctgtccagtactttcagcacctggatcatatgggcagaagagtggatttatatgagaga
cctgagctgtccctgggctcatatgagtttactgctacgctggattattgcaagaacaat
aagcctcccagtcctcctgcttacatttttatgatcgatgtctcctacaacaacttaaag
agtggacttgtcagactgatatgtgaggaactaaagacactgctagatcatcttccaaag
gaagagggctctgaaagttcagctataaaggtgggctttgtcacctacaacaagatcctg
cacttctacaatgtaaacagtgcactagctcagccccagatgatggtggtctcagatgtg
gcagagatgtttgtgccactcttggatggattcctggtaaactttcaagactcacgagcg
gtcatcaacaatctcctgagccagatccctgatatgtttgctgatactaatgaaagtgag
actgtttttgctccagtgatccaagccggagttgaggcactaaaggccgctgagtgcagt
ggaaagctcttcatcttccagtcctccctccccacagcagaggcccccgggaagctcaaa
aaccgagacgacaggaagctggtgaacactgaaaaagaaaagacattatttcagccacag
cgtggtgtgtatgagcagctcactaaagaatgtgtgagccagggatgctgtgtgaacctc
ttccttttcccaagccagtatgtggatgtggccaccatgggtgacatccccactcacact
ggcggctcagtgtacaaatacagcaacttccaggtgcaggtcgacggtcagcatttcctc
agtgatttgaggctagatgtgaagaagtctattgggtttgatgccatcatgcgtgtgcga
accagcacagggtttagggctacagaattctttggttccttccatatgaacaacaccaca
gatgtggagatgcctgcagtggactgtgacaaaacagttacagtggagtttaaacatgat
gacacacttaatgaggagactggagctcttatacagtgcgctctcctgtacacatctgtc
agtggtcaaagacgtctgcgcattcacaacctcagtctgaactgcagctcccaactctct
gagctctataagagctgtgagactgatgctctcatcaacttcttcgccaagtcagcatac
aacgctgtgctgaaccagcctgtgcggacggtgagagagatcctggtaaagcagacggcc
cacatgctggcctgctacagaaagaactgtgccaatccctctacagccagtcagctgatc
ctgccagatgcaatgaaggtgttcccagtatacatgaacagcctgatgaagtctccagtg
ctggttggcagtgcagaactctgtacagatgaccgggcctttcacagactcagcatcatg
tccatgggagtggaggagacccagatcctgctttacccacagctcattccagtgcatacc
atggatatggcgagtgagtcgataccaccagcagtgcgctgctcagaggagcgtctgagt
gacacagggatgtttctgctggagaacggccagtctctgttcctgtggcttggccaggcc
tgtcctcctgatcttatccagaacctcttcaatgtgccttccatggcccacctcggccct
gacatgacttcattgcctgagctggataacacatattctaggaagctgcacttcatcatc
tctgccatttcccagcagcggtccaaatccatgaaggtggtgattgtaaagcagaaggac
agatcagaaatgcagttgcgtcagcacctggtggaggatgagggcctacacggaggggcg
tcctacatggacttcctgtgctttgttcaccgcgagatcagacagcttctaacctaa
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integrated database retrieval system
