Trichomycterus rosablanca: 134312325
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Entry
134312325 CDS
T09921
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134312325 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134312325 (dysf)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Others
Ferlins
134312325 (dysf)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134312325 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
PTEN_C2
CEP76-C2
NusB
Pex24p
Motif
Other DBs
NCBI-GeneID:
134312325
NCBI-ProteinID:
XP_062850250
LinkDB
All DBs
Position
4:31906766..32037091
Genome browser
AA seq
2091 aa
AA seq
DB search
MLRCVIQRATNLKNVEKGERHSDPLASITFRGSKKKTKVVKNNVNPVWNEGFEWDLKGVP
LDSAAELHVVVKDHEKMGRNRFLGECRVSLRDVINSPNLAATFTVSLVDTKRNNTGATVT
LQVSYIPPPGMAPFFQPPPQPEATIHTPVELDTVTVFSLDTMEEEDTESMVMIEAEEEPE
PVPGPQGQDIGAPISPPKKAPPAFTHGIKKKKQQSNKAPLSNKPQDLQVRVRIIEGRQLP
GVNIKPVVKISVAGQTKRTRIKKGNNPFFDETFFLNFFESPADLFDEPIFITVFDSKSLR
TDSVIGEFKMDVGMVYNEHRHAILRRWLLLADPDDLSAGARGYLKVSLIVLAAGDEAPME
KDGVYEREDIEANLLRPAGLTLRGATFTLKVYRAEDLPQMDDAFMDGIKGFLGFDSNRKN
LVDPLVEINFAGKTMCSRILEKNANPQWNQSLALPIRFPSMCEKMRIRILDWDRASHNDV
IGTTHLCMSKISAPGGEIEDELTSRTFQTTIDDSLGFLPTFGPCYVNMYGSPREFTTFSD
PHEVLNLGKGEGVAYRGRLLLELTTKLCEKVEQKIEDIYPDDLLVVEKFMRKRKYSLFAA
FYSATLLQDVDDAIQFEVSIGNYGNKFDYSCLPLASTTQYSCAVFDGCQYYYLPWGNVKP
VVVLSSEWEDISPRIEALNMLVSIKERLDTNLKRVQQSLQAGGDQDELEERVVQLLDDII
ADCSEDLPELDSWLCATSLDKSLRRLRKVNLKQIEQAALSLKHGPETELSTVMEQAEDWA
MRLQSLAEEPQNCLPDIVIWMLQGDKRVAYHRIPAHEILFSQGYCGKHCGQLQTILMKCP
QGGRNDSKIPAQLRVKVWFGLTADVKHFNQFSEGKLSVFAETYENQTKLALVGNWGTTGL
SYPKFSDITGRVKLPKDSFKPSPGWTWAGDWYINPEKTLLYDADAGHMTFMEEVFENQMR
LPGGQWIGMPEGYTDVNGEKAVPKDDIECPPGWVWKDEEWSKDLKRAVDDQGWEYGITIP
PDRRPKSWVPSEKMYHTNCRRRWIRLRRRDLQKMEALRKQRPDESEREGWEYASLFGWKF
HLKQKKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLSSIPDDKNDDKSVTTSFGVNRPT
ISCFFDSGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSILHQSQKTVTVRNTLNPTWDQ
TLIFFEIEIFGDPKVTEKNPPNIVVELYDQDTYGADEFMGRSICQPSVISSPRLAWYPIL
KNGKPAGELLAAFELIHRDKPVVHHMPGEEGDTLPHSHIMDELVFPVLVSESLQQWPEDL
PYPPPQREPNVYVVPQGIKPVLQRTAIEILAWGVRNLKSFQMASVTSPSLQVECGGCMVQ
SCVIRNTKKNPNFDINTLFIDVRLPREELYMPPLVIKVIDNRQFGRKPVVGQCTIQSLEE
YRCQPEEPEEEPVNEELERIPHTPRDDVLIDIDDKEPLISGQEEEFMDWWSKFYASTGET
KKCGTYMDKGLDTLQVFDTELEKVEGFQRLADFCQTFKLYRGRTQENESEDPSIVGEFKG
MFKIYTLPDDPSAPSPPRQFSQLPPNGTEECLIRVYIIQAYGLQPKDTNGKCDPYVKITL
GKKSINDHDNYIPCTLDPVFGKVYELKCSLPLEKDLKIMLYDYDMLSKDEKIGETVIDLE
NRFLSRFGGRCGLPQSYCVSGVNQWRDQLKPTQLLHRLCQSRNYKLPVYKHDRLFFRGHE
YTAADLDEAKPANPQLGPLEERLALLVLRRQGLVPEHVETRPLYSPLQPDIEQGRLQMWV
DIFPKSLGLPGSPFNITPRKAKKFFLRCIIWNTSDVILDDVSVTGERMSDIYVKGWMHGH
EGNKQKTDVHYRSLGGEGNFNWRFLFPFHYLPAEQLCTIDKKEHFWSLDKAETKIPPKLT
IQIWDNDKFSFDDYLGCLEMDLNRMLRPSKSPEKCGLELLTQPPDKLVSLFEQKTVRGWW
PCVFVRQGEKTIAGKVEITLEIVSEQEQDERPAGLGRDEPNMNPRLEEPQRPETSFLWFS
SPFKTLRFIVWRRFKWLILALILLFFILLFFGVFLYSFPNYMAMKIVGPKS
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtgtgatccagagagcgaccaatttaaagaacgttgagaaaggagagcgg
cacagtgacccgctagccagcatcacatttagagggtcgaagaagaagaccaaagtcgtg
aaaaacaatgtcaaccctgtgtggaatgagggatttgaatgggacctaaaaggagtgccc
ttagactcagcagccgagctgcatgtggttgtcaaggaccatgaaaaaatgggaaggaac
aggtttctgggggaatgtcgagtttctttaagagatgttatcaactccccaaacctagca
gcaaccttcactgtgtccttagttgacaccaagagaaacaacactggggctacagtgact
ctgcaggtttcctacatccctcctccaggcatggcccctttttttcagcctccaccacag
ccagaggctaccatacacactcctgtagaactggacactgtcacagtgttctcgttggac
actatggaagaagaggacacagagagtatggtgatgatagaggctgaagaagagcctgaa
cctgttccaggacctcagggccaggacatcggggctcctatatcacctccaaagaaagca
cctcctgccttcacccatggcatcaagaaaaagaaacagcagagcaacaaagctcctctc
tccaacaaaccccaggacctccaggtgcgggtacgaatcatcgaaggaagacagctgcct
ggagtcaatattaaacctgttgtcaaaatatctgtagcaggacagacaaaaagaacacgc
attaaaaaaggcaacaatccattttttgatgagactttcttcctgaacttctttgagagc
ccagctgatctttttgatgagcctatattcataacagtctttgactccaagtctttacgc
acagactctgtcattggagaatttaagatggatgttggcatggtgtataatgaacacaga
catgctattcttagaaggtggctgttgttggctgatcccgatgacctttcagctggagcc
agaggctatcttaaggtcagcctgattgtcctggctgcaggtgatgaggcaccaatggaa
aaagatggtgtttatgagagggaggatattgaagcaaacctgttgagaccagcaggcctc
acactcaggggtgccaccttcactcttaaagtgtacagagcagaggatcttcctcagatg
gatgatgcttttatggatggaataaaaggctttttgggttttgactccaaccgaaaaaat
ctggtggatccattagtggaaatcaactttgctggaaaaacgatgtgcagcaggatactt
gagaaaaatgccaatccacagtggaaccaaagccttgcactccctatcagatttccatct
atgtgtgagaaaatgaggatacgcattttagattgggatcgagcaagccacaatgatgtc
attggcaccacacacctgtgtatgtccaagatctctgccccaggaggagaaatagaagat
gagttgacttccaggaccttccaaacgaccattgatgacagcctgggcttcctgccaaca
tttggtccatgttatgttaacatgtatggaagtcctagagaattcacaaccttctctgac
ccccatgaggttctgaaccttggcaagggtgagggtgtagcatatcgtggccgtttgctc
ttggagcttaccactaagctgtgtgaaaaagtggagcagaaaattgaagacatctaccca
gatgacctgttagtggtagagaaattcatgcgaaagagaaagtattcgctgtttgctgct
ttttactctgccaccctccttcaggatgtggatgatgccatccagtttgaggtcagcatc
ggaaactatggcaacaagtttgactactcttgtctgccccttgcctctaccacacagtac
agctgtgctgtttttgatggttgtcaatactattacctgccttgggggaatgtaaagcct
gtggtggtgctttcgtcagagtgggaggacatcagcccccgtatagaggcccttaacatg
ctggtcagcatcaaggagcgcctagacacaaacctgaaacgggtgcagcagtcactccaa
gcaggaggtgaccaagatgagctggaggaaagggtggtacagctgcttgacgatataatt
gcagactgcagtgaagacctgcctgagctggatagctggttgtgtgcaacttcactagat
aaatccttgcgacgtttgcgtaaggtaaacttaaagcagattgagcaggctgccctgtcg
cttaaacatggcccagagacagagctgagcacagtgatggaacaggctgaggactgggcc
atgagactgcagtcactcgctgaggagccccaaaattgcctgccagacattgtaatctgg
atgcttcagggagacaaacgagtggcttaccacagaattccagcccatgagattctcttc
tctcagggctactgtggcaaacactgtggtcagcttcagaccatcttaatgaagtgtcct
cagggtggcagaaacgactccaaaatcccagcacagcttagagttaaagtatggttcggt
ctgactgcagatgtcaagcacttcaaccagttttcagagggcaaactctcagtttttgca
gaaacatatgaaaaccaaactaaacttgcactggtgggaaactggggcacaactggacta
agctaccccaagttcagtgacatcactggtagagtaaaattgcccaaagacagctttaaa
ccatctccaggctggacctgggctggtgactggtatatcaacccagagaaaaccctgctg
tacgatgcggatgctggccatatgactttcatggaggaagtgtttgaaaatcagatgcgg
ctgccgggtggacaatggattggtatgccagaaggctacacagatgtgaatggagaaaaa
gcagtgcctaaggatgatatcgagtgtcctccaggatgggtttggaaagatgaggaatgg
agtaaagatcttaaacgggctgtggacgatcaagggtgggagtatggcattaccatccct
cctgaccgtcggcccaagtcttgggtgccatctgagaaaatgtaccacaccaattgcagg
cgtcgctggatccgccttcgccggagagacctgcagaaaatggaggctctaagaaagcag
cgtccagatgagtctgagagggagggttgggagtatgcctctctgttcggatggaagttc
caccttaagcagaagaagaccgattcattcaggcgtcgacgttggcgttgccgcatggag
cctctggaaaagactggacctgctgccatctttgccctggagtgctcactgagcagcatt
cctgatgacaaaaatgatgacaagtcagtaacaacaagctttggtgttaatcgtcctact
atctcctgcttctttgatagtgggacacgctaccatttgcgctgctatctgtaccaggct
agagacttgctggctatggataaagacagtttctcagatccctatgctattgtatctatc
ctgcaccagagccaaaagacggtgacagtaaggaacactcttaatcctacctgggatcaa
actctaatcttctttgaaatcgaaatatttggagatcccaaagtgacagagaagaaccct
ccgaacattgtggtggagctgtatgatcaggacacttatggagcagatgagtttatgggg
cgcagcatatgccagccctccgtgatctcctctcctcgcctcgcctggtaccccatcctg
aaaaatggaaaaccagctggtgaactacttgctgcctttgagctaatccacagagataag
cctgtggtacatcacatgcctggcgaagagggagacacactcccacattctcacatcatg
gatgagcttgtatttccagtgctcgtctctgagagtctgcagcaatggccagaggacttg
ccataccctcctccccagagggaaccaaatgtctacgtagtgccacagggaatcaaacct
gtcctccagcgcactgctatcgagatactggcatggggtgtgcgcaacctgaagagcttc
cagatggccagtgtgacgtctcccagcttgcaggtggagtgcggtggttgtatggtgcaa
tcctgcgtcattcgcaacaccaagaagaatcccaactttgatatcaacactctttttatc
gatgtgagactgcccagggaggagctctacatgccaccattagtgatcaaggtaattgac
aaccggcagtttggcaggaagccagtggtgggccagtgtaccatccaatccctggaggag
taccgctgccagcctgaggaaccagaggaggagccagtgaatgaagaacttgaacgcatt
cctcacacaccaagagatgatgttctgattgacatagatgacaaggaacctctcatttct
gggcaggaggaggaattcatggattggtggagcaagttctacgcatcaacgggtgaaact
aaaaagtgtgggacctacatggacaaaggcttggacactctacaggtttttgacactgag
ctagaaaaagttgagggctttcagcggctagcagatttctgtcagacattcaagctttac
cgtggacgcactcaggagaatgagagtgaagatccctccattgttggagagttcaagggt
atgttcaagatctacacattaccagatgacccatctgcaccttccccacctcgccagttt
agccagcttccccctaacggcactgaggaatgcctgatacgggtctatattattcaggct
tatggcctgcagcccaaggacaccaatggcaagtgtgacccatacgtcaagatcacacta
ggaaagaaatccataaatgaccatgataactacataccctgcaccttggaccctgtgttt
ggaaaggtgtatgagctgaaatgttctctaccgctggagaaagacctcaagatcatgctg
tatgactatgacatgctctctaaagatgagaagattggtgagactgtcatcgacctagaa
aatcgctttctgtcacgctttggaggccggtgtggccttccccagtcctactgtgtgtct
ggagtaaaccagtggagagaccagttaaaaccaacacagctgctccatcggctttgtcaa
agcagaaactacaagctaccagtttacaagcatgacagactgttcttcaggggccatgag
tacaccgctgcagacctggatgaggcaaagccggccaaccctcaacttggcccgctggag
gagcggctggctctgctggtgctgagaaggcaaggcctcgtgcccgaacacgtggagact
aggcctttgtacagccccctgcagcctgacatagagcagggaagattacaaatgtgggtg
gacattttcccgaaatctctgggcctaccaggatcgcctttcaatatcactccacgcaaa
gcaaagaagttctttttgcgctgtattatatggaacaccagtgatgtaatactggatgat
gtcagtgttactggtgagcggatgagtgacatttatgtaaaaggctggatgcacggacac
gaggggaacaagcagaagacagatgtgcactatcgctcgctaggcggcgagggtaacttt
aactggaggttcctctttcccttccattacttacctgctgaacagctctgtaccattgat
aaaaaggagcacttctggagtttggataaagctgagaccaagattcctcctaaactcacc
attcagatttgggacaacgacaagttctcttttgacgattaccttggttgtttggaaatg
gatttgaaccgcatgctcaggccatcgaagtcacctgagaaatgtggtctagaactgctc
actcagcccccagacaaactagtttctctgtttgagcagaagactgttaggggctggtgg
ccgtgtgtctttgtcagacagggagagaagaccatagcagggaaggtcgagattactctg
gagatagtttcagagcaggaacaagatgagaggcctgcaggtctgggaagagatgagccc
aatatgaaccctcgtttggaagagccacaacgtcctgagacgtccttcctgtggttctca
tctccttttaagacactaaggtttatagtgtggagaaggtttaaatggctcatcttggct
ctgattcttctcttcttcatcctgctgttctttggagtcttcctctactctttcccgaat
tacatggctatgaagattgtggggcccaaaagttaa
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integrated database retrieval system
