Trichomycterus rosablanca: 134312386
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Entry
134312386 CDS
T09921
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134312386 (gigyf1a)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134312386 (gigyf1a)
Surveillance factors
Other surveillance factors
134312386 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
134312386
NCBI-ProteinID:
XP_062850359
LinkDB
All DBs
Position
4:complement(39781994..39822836)
Genome browser
AA seq
1012 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDDKIPEDM
QDKAFAAILQDESQQPLALVPLTEEEQRNFSLSVNSVAVLRLMGKGGGAIPAGIARGRGS
VRGGRGRGRGEGGFYQRSPEEEVGFSRNVREIHRSQSWDDRGERRFEKPLRREGLRVGFE
EVSSVVRKEFMRSDSDNWRTLREEHEQEEEGDTGGSWRLAGSRRDDGGPRSAGWREHGET
RRRKFDFDFRDGGSEGGRRRTGSEGAEEERDGLPEWCTDEEDGEMGTFDSSGAFMSFKKG
PKDPIPEEEFDFQGVEDEDEFGTEAERKNGSVGEKTDSDETDLAAVSEVEVKSLPPSSPS
PPPFLTALQAEPTPSVAPTAPEDPQPLPAIASKMPSEVVLPEPVSELSPSASSSLPSSPP
SSSSAATDLPLTGGDPEDDEGLKHLQQEAEKMVAALQDTSPEEECFTQTLHESRNTAAAL
PLSHDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKM
WGRVPFAPGPSPPPLLCNLDQDRLKKQQELAAAAALYQQLQQQQQQQQQQQLFQLINRCG
EQGMMPSMNRSISVPDTGSMWDMHTSASQPTGGEAILWDLPMNSSTQGPILEQLQKLQER
REAELRAKEEERKRRDEKRRQQEEQKRREEEELFRRKQELLVKLLQQAPRQGASGSGWSG
GPVPGLGKQNKPMNVMDLQQEAERVYKQQHRAQQQQRWAPDGVGSLWASGGMDGKAPGGS
SPSGGSMGVWDEALKNQSAIRSNMGLKNSRSSPSLSSTDPYMMINRRKRTEDEERLLKLL
QGMKTQDGFTTWCEQMLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDT
VEAKEFAKQFLERRAKQKANHQRQQQLSKDVGGLTMNNFALQDSMRGMNPATLQSVFQAV
HSGKGGMGYDQAGKLKKKQPMMLHSDPSILGYSFHGAGDRMSLSEMEMVEDY
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagacacttaacttcggcccagaatggctccgtgcactttccagtggaggc
agcgtgacttcccctcctccctctcctgctatgccaaagtacaagctggccgaatatcgc
tatggccgagaggagatgttagcactttatgtcaaagacgacaagattccagaggacatg
caggataaggcttttgctgctattctgcaggatgagtctcagcagcctctggcactggtg
ccccttactgaagaggagcagcggaatttctccttgtccgtcaacagtgtagctgttctg
aggctaatgggtaaagggggtggggccattcctgctggcattgctcgtggcagaggcagc
gtgagaggtggccgaggcagaggccgtggtgaaggtgggttctaccaaagaagtcctgaa
gaagaagtgggatttagcagaaatgttagagagatccaccgtagccaaagctgggatgac
cggggtgagaggcgttttgagaagcccctgcgtagagaggggttacgtgttggttttgag
gaggtgagctccgtggtaagaaaggagttcatgcgctctgacagtgataactggcgcaca
ctgagagaggagcatgagcaggaggaagagggcgacaccggcggaagctggagactggct
ggctcacgtcgagatgatggtggtcctcgctcagcaggctggcgggagcatggcgagact
cgccgcaggaagtttgactttgacttccgggatggagggagtgaagggggcagaagaagg
acaggaagtgaaggtgctgaggaagaaagagatgggttacctgagtggtgcacagatgaa
gaggatggggaaatgggcacctttgactcctctggtgctttcatgtcatttaagaagggc
cccaaggaccctattccagaagaggagtttgatttccagggtgtagaagatgaggatgag
tttggtacagaagcagagaggaaaaacggcagtgttggagagaaaaccgacagcgatgag
actgatttggcagctgtgtctgaggtagaggtaaagtctctccctccctcctctccttct
cctcctccgttcctcactgctcttcaggccgagcccactccctctgttgcccccacagct
ccggaggatcctcagcctttgcctgccatagccagcaagatgccaagtgaagtagtgtta
ccagaacctgtgtccgagctgagcccgagtgcctcctccagtctgccttcatcccctcct
tcatcttcctctgctgctactgatctcccactaacggggggtgaccctgaggatgatgag
ggattgaagcacctgcagcaggaggcagagaaaatggttgcagctcttcaggacacatct
ccggaagaagagtgttttacccagacactgcacgaaagcagaaacactgcagctgccctg
cctctctcccatgattctgccatgaagtggttctacaaagacccacagggagagatccag
ggcccttttagcactgtggagatgtgcgagtggtttcaggcaggctactttagcatgtct
ctgctggtgaagcggggctgtgacgagggcttccagcctctgggggatgtcattaaaatg
tggggccgtgtacccttcgcccccgggccctccccaccaccgctgctgtgtaatctagat
caggataggctgaagaagcagcaggagttagctgcggctgcagcactctaccagcaactg
caacagcaacagcagcagcagcagcagcagcagctatttcagctcattaacaggtgcgga
gagcagggtatgatgccttcgatgaacagatcaatatcagtgccagatacagggtccatg
tgggacatgcatacctcagcctcacagccaacaggtggtgaggccattctatgggactta
ccaatgaattcttcaactcagggtccaattcttgaacagcttcagaagctccaggagaga
cgagaggctgaactcagggcgaaggaggaagagcgaaaacgaagagacgaaaaaaggagg
cagcaagaagaacagaagaggagagaagaggaagaactctttaggcgcaaacaggagctg
ctggtgaagctgctgcagcaagctccgcgtcagggtgcttcaggctcaggatggagcgga
ggccccgtgcctggactgggaaagcagaacaagcccatgaatgtgatggatcttcaacag
gaggcagaaagggtctacaaacaacagcatagagcccagcagcaacaaagatgggctcct
gatggtgtgggttctctgtgggcatctggtggcatggatgggaaggcaccagggggaagc
agtccctcaggagggagcatgggtgtttgggacgaggctcttaagaaccagagtgccatt
cgcagcaacatgggcctgaagaacagtcgcagcagcccatcgctcagtagtacagaccca
tacatgatgatcaaccgacgcaagcggacagaggacgaagagcgcttgctgaagcttctg
caggggatgaagactcaggatggctttaccacatggtgtgagcagatgctgcatgctctt
aatacctctgccaacaactccaactcctccctggatgtggccaccattgtagcctattta
aaggaggtggagtcaccgtatgaggtcctggactttattcgctcctacctgggggacact
gtggaagccaaagagtttgccaagcagttcctggagcgccgtgccaaacagaaagccaac
caccagagacagcagcagctctctaaagatgttggtgggcttaccatgaacaactttgct
ctgcaggattctatgagggggatgaacccagccactctgcagtccgtgttccaggcagtg
cattctgggaagggaggcatgggctatgaccaggcaggaaaactgaagaagaaacaaccc
atgatgcttcactctgatccaagcattttaggatactcattccatggtgcaggggatcgg
atgagcctgagcgagatggagatggtggaggattactga
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