Trichomycterus rosablanca: 134312396
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Entry
134312396 CDS
T09921
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134312396 (fxr2)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134312396 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
134312396 (fxr2)
mRNA cycle factors
Stress granule specific factors
134312396 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
134312396
NCBI-ProteinID:
XP_062850377
LinkDB
All DBs
Position
4:40864016..40884144
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AA seq
671 aa
AA seq
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MDGVAGVDGVATMDGLPVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVR
LPPPPDYSKDIGEGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVT
SERIRPVNPNSPSSQNTFHKVIIAVPEDLREICLNDNLHKDFRKAIGANCIFYNTSVHEL
VVLSTNDSTVKRASLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVRED
LMGLAIGSHGANIQQARKVPGVTAIELEEESCTFRIYGESPEAVKQARVYLEFKEDSFQV
PRNLVGKVIGKSGKIIQEIVDKSGVVRVRIEGDNDKKLPREEGMVPFIFVGTKENISNAQ
ALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRSAPGRTGGPGASDRERGYLTDESSN
SLQTSRTYGGRGRGRKANNAYSGYGTNSELSNASESEDLGERDSRPRGVGGEERGSRRGG
RGRGSSTGRGRGGSGPRNSNTISSVLKDPDSNPYSLLEGECDVGGDTDASESMGGNDRRR
RSRRRRNDQEPSVIDAANESDGQAGASENGLDDEGKPQRRNRSRRRRNRGTRPDGGSASR
DRQPVTVADFISRAESQSRQNLPVKKDASQASHPKENGTSVKKEEHAPSKRSPSNGVASS
GEATTLVNGVS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtagccggcgtggacggagtagccaccatggacgggctgccggtggaggtg
cgcggatctaacggggccttctacaagggttacatcaaagatgtccacgaagactccctt
actatagtcttcgaaaacaactggcaaccagaaagacagctgccattcagtgatgtgagg
ttgccgcccccacccgactacagcaaggacattggcgagggagaggaagtggaggtgtac
tcccgagcaaatgaacaggaaccctgcggctggtggctagccagagtgagaatgatgaag
ggcgagttctacgtgatagagtatgcagcatgtgatgccacatacaatgaaattgtcact
tcagagcgtattcgtccagtcaacccaaacagcccctcctctcaaaacacctttcacaaa
gttatcattgctgtgcctgaggatctccgagaaatctgtttaaatgacaaccttcacaaa
gacttcagaaaagcaattggagctaactgcatcttctacaacacttcggtgcacgaactg
gttgtactgtccacaaatgactccacagtgaaacgagcatctcttctgagtgacatgcac
tttcgcagcattcgaaccaaactcatgcttatgtcccgtaatgaggaggccaccaaacat
ttggagacgagtaaacaactggcatcagcctatcaggaggaggtgcgagtacgtgaggat
ctaatgggtttggctattggctcccatggtgcaaacatccaacaagcacgcaaggttcct
ggagttaccgccattgagcttgaggaggagagctgcacctttagaatctatggagagtca
ccagaagctgtaaagcaggctagggtatatctggagtttaaagaggactcgtttcaggta
ccccggaatcttgtaggcaaagttatcggaaaaagtggcaaaatcatccaagagattgtg
gacaaatctggtgtggtgcgggttcggattgaaggggacaatgacaaaaagctgcctaga
gaggagggtatggttcctttcatctttgtaggaaccaaagaaaacatcagtaatgcccaa
gccttgctggaataccatgttgcctacctgcaggaggtggaacagttgcgtcttgagcgg
ctacagattgatgagcagcttcgtcagattggcgtaggttatcgttcagctccaggtcgc
actggaggtcctggtgccagcgatcgtgagaggggttacctgactgacgaaagcagcaac
tctcttcagacttcccgcacctatggagggcgaggcagaggacgcaaggccaacaatgca
tactctggatatggaacaaactctgagctgtcaaacgcatctgaatcagaggatcttgga
gagagagattctaggccccgaggagtaggaggggaggagaggggctccaggagaggaggc
cgtggtcgtggatccagcacaggcagaggtcgtggaggctcaggaccccgcaactccaat
acaatcagctcagtgctcaaagacccggacagtaacccctactctctgctggagggtgag
tgtgatgttggcggtgacacagatgccagcgagagcatgggtggcaatgaccgccgaagg
cgctcccgtcgtcgccgcaatgaccaggagcccagtgtgattgatgccgccaatgaatca
gatgggcaggcaggtgcaagcgagaacggactggatgatgaaggcaaaccccagcggcgc
aatagaagccggcgccggcgcaatcgtggcaccagacccgacggtggctctgctagccgt
gacagacagcctgttacagtggccgacttcatctctcgtgcagaatctcaaagcagacag
aacctgccagtgaaaaaagacgcatcacaggcctctcatcctaaggagaatgggaccagt
gtaaagaaggaagagcatgctccatctaagcgctcccctagcaacggtgtggcttcgtct
ggagaggccaccaccctggtgaacggtgtttcataa
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