Trichomycterus rosablanca: 134312397
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Entry
134312397 CDS
T09921
Name
(RefSeq) RNA-binding protein 4.1-like
KO
K13187
RNA-binding protein 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134312397
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134312397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
Calcipressin
RRM_occluded
zf-CCHC_3
RRM_7
zf-CCHC_2
Mito_fiss_reg
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
134312397
NCBI-ProteinID:
XP_062850378
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All DBs
Position
4:40954415..40962783
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AA seq
419 aa
AA seq
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MVKIFVGNLSQNTTTEELRSLFSQYGKITECDILKNFGFVHMESKAEAEEAIRNLHHYTL
NGLAMNVEMSRGKPKASTKLHVGNISSCCSNQELRAKFEEYGPVVECDIVKDYAFVHMER
VEDAMQAIRGLDNTAFQGKLMSVKLSTSRLRTAPGMGDRTGCYRCGQEGHWSKECPLDQN
GSYREAQGTEAYDGSRYVARSAGHGLQRGFSGEPNFSSSYVPAHDFTQSGSYGNPGYGSN
MGTGYNGAISYGVAAGYSMGVAYGNESAYSSGSVGYGDAVSGYPVRRASYDERDPYGVVD
YYEKFRARPYESGYFDDRQVSVPVPGPPPPPPPPPMSSPVSTERVSSSSFDMYERNPFAT
SASASSYYSRDRSPIRRLPLETQGLAYDRASITPVSSLSRSTVYDIPRDPYTDRSRYTY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatctttgttggcaacctttcccaaaacacaactacagaagagctgcgctcc
ttgttctctcagtatggtaaaataacagagtgtgacatcctaaaaaactttggctttgtc
cacatggaaagcaaagccgaagctgaggaagccattcgcaacctccatcattacacgctt
aatggtcttgctatgaatgtggagatgagccgaggaaagcccaaagcctccaccaaactc
catgtgggcaatattagcagttgctgttctaaccaggagctgcgggccaagttcgaggaa
tatgggcctgtagttgagtgtgacatagttaaggactatgcctttgttcacatggaaaga
gtggaggacgcaatgcaggccatccgaggcctcgacaacacagcctttcaaggcaaactg
atgagcgtgaagctttcgactagccgcctgcgtacagcgccgggaatgggtgacagaaca
ggttgttatcggtgcgggcaggagggccactggtccaaagaatgccccctggaccagaat
ggttcatatcgcgaagcacagggcacagaggcatacgatggctcccggtatgtggcgcgc
agtgctggtcacggtctccagcggggcttcagtggtgaaccaaactttagcagtagctat
gtgccagcacacgacttcacccagagtggcagttatgggaatcccgggtatggcagtaac
atgggcacagggtataacggtgcgataagttacggtgttgccgcgggctatagcatgggg
gtggcgtacggaaatgagtctgcgtacagcagtggtagcgttggctatggcgatgcagtg
tctggctatcctgtgcgtcgggcgtcctacgatgagcgggatccgtacggcgtcgtggac
tactacgagaagttccgtgcccgtccgtatgagagtggttattttgacgacagacaagtc
tcagtcccagttcctggccctccgccacctcctcctcccccccctatgtcctcgcccgtt
agcaccgagcgcgtgtcctcgtctagcttcgacatgtatgagcgcaacccctttgccacc
tcagcttctgcttcttcgtactacagccgtgataggagcccgatacgccgacttccgctc
gagacgcaaggattagcatacgaccgtgcgtccatcacccccgtgtcttcactttcccgg
agcactgtgtatgacataccacgggatccttacaccgacaggtcgcgctacacctattaa
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