Trichomycterus rosablanca: 134312941
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Entry
134312941 CDS
T09921
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134312941 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134312941 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
134312941 (cntn1b)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
Contactins
134312941 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
Others
134312941 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
134312941
NCBI-ProteinID:
XP_062850711
LinkDB
All DBs
Position
1:complement(54200090..54235902)
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AA seq
1036 aa
AA seq
DB search
MVVGGIKMAAQLVVLCCLACLLFSANAIKPRFFEPRIFDKEATGFGPIFEEEPLDTVYAE
DSPEAKISMNCRVRANPPATIKWWHNNWEIKLLEQPDEHHSLVGGNLVITNPDKSKHAGK
YVCVAKNVYGVVISKEAVVRFGYLNQFPTDEREPVTVKEGQGAVLLCNPPSRYPTEVMYR
WIYNDFPNFIIPDQRRFVSQTTGNLYISKVEVSDIGNYSCFVSSPLIGKSVFSTPIALEP
EIEKEVKRYPADIQVKFPKTYALVGQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMN
GALLHLINVQYEDEGSYECEALNIKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLS
CTAVGKPLPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENNWGTIYANAELRVVSC
APTFIYNPVKPVLLGAENGRVVIECKPRAAPKPRFIWKRGSELLSNNSRMFVWDDGSLEI
LNVTKSDEGLYTCYAENDRGKANSTGTLSITEATKITTGPSDVELLVGESTVLKCSASYD
TSLDIIFIWSVDSNVINFATDFEHYEQLLDQENSGDLMIKNIQVGHAGHYTCTAQSIVDN
TTAAAEVVVKGRPGPPGGVRVEEIRDTSVKLVWSLGSDHGNTLIQHIIQTRDFYALDPED
WKTADTSPAFLDGKAEAAEVIDLYPWMEYQFRVYAINEVGAGESSVPSIKIKTWDAIPTM
SPTDVDGFVGMNGELIISWTPMKPQYFFGKRFGYVVAFKAHEDFNWKWSTVADHEARRYV
YRDSIIPNTEIQVKVKGYNTKGEGPYSLIKVVYSSESAPTEAPLDVYARQVTSTEALVWW
LPVYQVPPHWVDGYQIRYWRKYDDNEAAASRVLVHSSVNQTRLENMRPDSHYLIEVRAYN
GAGLGPPSEHCEMFTRRPPPNRRLRVYKYVSFTRKWLYIYWDHIYNYWNESYVEGYKILF
RKEGERYGKLYTTGRHYIDFPMPETGDYLVEIRARCEGGDGPISQIRVQGGAVLSSQSLC
AVSLLLLVLVYMNLDL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcggtggcatcaaaatggcagcccagctggtggtcctgtgctgtttagcttgt
ttgctcttttcagctaatgcaatcaagcccaggttctttgaacccagaatctttgacaag
gaggccacaggttttgggcccatatttgaggaggagcccttagacacagtatacgctgag
gattcacctgaagccaaaatctccatgaactgcagagtccgggccaacccaccagccact
attaaatggtggcataataactgggagattaagctgttggagcagccagatgaacaccac
agtttagtaggtggaaacctggtcatcaccaacccagacaaaagcaagcatgctggaaaa
tatgtgtgtgtggcaaagaatgtttacggcgtggtcatcagcaaagaagctgttgttcga
tttggatatcttaaccagtttcctactgatgagagagagcctgtgactgttaaagaggga
cagggggctgttcttctgtgtaatccaccctctcgctatccaactgaggtgatgtatcga
tggatctacaatgattttcccaactttatcattcctgatcaacgacgctttgtgtcacag
accacagggaatctctatatttctaaagtagaggtctctgacattggcaactactcatgc
tttgtgtcgagccctttaattggcaaaagtgtattcagcacacccattgccctggagcca
gagatagagaaggaagtgaagcgatatcctgcagacatccaggtcaaatttcctaagacg
tatgccctagtgggacaaaacatcacactggagtgttttgctctgggaaaccctctccca
cacatccgctggagaaagctggatgcggatctcccacccaactatgaggttagcatgaat
ggtgcgctgctgcacctcattaatgtgcagtatgaagatgagggcagctatgaatgtgag
gcccttaacatcaaaggcatggattggtaccgccagtggctctatgttgaaggtgctcca
gagtgggcagagcatattaatgacacagaaaaagatgttggcagtgagcttactctgtcc
tgcactgctgtaggcaagccattgccatggatccgctggttaaaggatggctattcgtat
ggaaaaggggaactgaagttttccagtctcacatttgaagactcaggcatgtatcagtgt
gttgctgaaaacaactggggaaccatctacgctaatgcagagctgcgtgtcgtctcttgt
gcacctacatttatatacaacccagtgaaaccagtcctgctaggggctgagaatggccgc
gtggtcattgagtgtaaaccacgagcagctccaaaacccaggttcatttggaaacgtggc
tctgaactgctttccaacaactcccgtatgtttgtctgggatgatggcagtctagagatt
ttaaatgtgacgaagagtgatgaaggtttatacacatgttatgctgaaaatgatcgtgga
aaggccaacagcacagggacccttagtatcactgaggcgactaaaatcacaacaggtcca
tcagatgtggagctgttggtgggtgagagtactgttcttaagtgctctgcctcctatgac
accagcttggatattatattcatctggtcagtggactcaaacgtcattaactttgccacc
gactttgagcactatgagcagttgttggatcaggagaacagtggagacctgatgattaaa
aatattcaggttggacatgcagggcactacacttgcacagcacagagcattgttgacaac
accactgcagctgctgaggttgttgtaaaaggtaggcctggtcctcctggtggggtgcgt
gtggaggagatcagagacacatcagtaaagctagtatggagtctgggctcagatcatggc
aacacacttatccaacacattatacagacacgagacttttacgctttagacccagaggac
tggaagactgcagatacatctcctgcattcttggatgggaaagctgaggcagcagaggtt
attgacttgtatccttggatggagtatcagtttcgtgtatatgccataaatgaggtggga
gcaggagagagcagtgtgccctccatcaaaatcaaaacctgggatgctattcctaccatg
tctccaactgatgtggatggctttgtgggcatgaatggcgagcttataatcagttggaca
cccatgaagccccagtacttttttggtaaaaggtttggctatgtggttgcatttaaagct
cacgaggatttcaactggaaatggtcaacggtggccgaccatgaggccagacgctatgtc
tacagggacagcattattcccaacactgagattcaggtcaaagtaaaaggctacaacact
aagggagagggcccatacagcctcatcaaagtggtttactcatctgaaagtgctcccaca
gaggcaccgcttgacgtttatgcacgtcaggttacctccactgaggctctagtgtggtgg
ctgccagtttatcaggttcctcctcactgggtggatggctaccagatccggtactggaga
aaatatgacgacaacgaggcagcagcctctcgtgttctggtgcacagttcagttaaccaa
acccggctggagaacatgcgacccgactcacactatctcattgaagtgcgcgcttacaat
ggagctggacttggaccacctagtgagcactgtgagatgttcaccagaagaccacctcca
aatcgtcgtctgagagtgtacaaatatgtcagcttcacacgtaaatggctgtatatctac
tgggatcacatctacaactactggaatgagtcttatgtggaggggtacaagatcttgttt
aggaaagaaggggagcgctatgggaaattatacaccactggcaggcactacattgacttc
cccatgcctgagacaggagattatttagtagagatacgggctcgctgcgagggaggagat
gggccgatttcacagatacgagtgcaaggtggagctgtactgagctctcagtctctctgt
gctgtgtctctgctgctgctggtgttggtctacatgaatctggacctttaa
DBGET
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