Trichomycterus rosablanca: 134313693
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Entry
134313693 CDS
T09921
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
trn
Trichomycterus rosablanca
Pathway
trn04150
mTOR signaling pathway
trn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134313693 (lrp6)
04150 mTOR signaling pathway
134313693 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134313693 (lrp6)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
134313693 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
134313693
NCBI-ProteinID:
XP_062850765
LinkDB
All DBs
Position
1:complement(59609540..59681386)
Genome browser
AA seq
1619 aa
AA seq
DB search
MGAVLRSLFLWSFCLHIRAVPLLLYANRRDLRLVDAASGNTANATVVVSGLEDAAAVDFV
YAQGFIYWSDVSEEAIKRTVFNSSGSTVQNTVVSGLASPDGLACDWLGNKLYWTDSETNR
IEVAELDGSFRKVLFWQDLDQPRAIALDPSRGYVYWTDWGEIPKIERAGMDGTNRAVIID
TNIYWPNGLTLDYSQKKLYWADAKFNFIHCCNLDGTEREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHSCQKQTGEERREVHSHIFSPMDIHVFSQKRQTMDVMSPCSLKNGGCSHLC
LLSPVKPYYQCACPTGVQLLEDNKTCRNEATKLLLLARRTDLRRISLDTPDFTDIVLHAE
DIRHAIAIDYDPVDGHIYWTDDDVQAIRRSQLDGSESQLLVTSQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGHMYWTDWGETPKIERAALD
GTERVVMVNTSLGWPNGLALDYTERKIYWGDAKTDKIEMMNMNGTDRRILVEDKLPHIFG
FTLLGDFIYWTDWQRRSIERVHKSTAEREVIIDQLPDLMGLKATYVHQAFGTNACAENNG
GCSHLCLYKPLGVACGCPIGLELMGDMSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRAA
MDGTGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACASTN
GHCSHLCLAVPVSSYVCGCPAHYSLNDDNKTCSAPTSFLLFSQKSAINRMVMDEQQSPDI
ILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSNSVGGHHLGLQPF
DLSIDIYSRFIYWTSEVTNVINVTRLDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQ
ERSPKIERAALDGTEREVLFFSGLGKPVALAIDNELGKLFWVDMDLRRIESSDLSGANRI
VIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKITREGRTKIQARIASLTDIHAVHDL
HIDEYNKHPCTSDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCA
SGEVDCIPQAWRCDGYAECDDDSDERDCPVCSDQEFQCDSKQCVDLSLRCNGKINCQDRS
DENKCEVYCPLDQFTCTNGQCIGKHKKCDHNMDCTDNSDEIGCYPTEEPSPQPTNTIGSI
VGVVMTLFVVGAIYFVCQRVLCPQINEDDEAMTNDFVVHAPSSVPLGYVPHPSSLSGSLP
GMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGPYFPPILNPPPSPATVRSQ
YTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRAQPASSSAIAK
GYVSDANYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSQHLYPPPPSPCTDSS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtgctgcggagtctctttttgtggagtttttgtttgcacatacgcgctgta
ccactcctcctgtatgccaacaggcgtgatttgcggttagttgatgcggcctctgggaac
actgccaacgccacagtggtggtaagcggtctggaggatgcagccgccgtggacttcgtc
tacgcccaaggttttatatactggagtgatgtgagcgaagaggccattaagcgcactgtt
ttcaacagctctggatctactgttcaaaacacagtggtgtctggcttggcctcccctgat
ggccttgcgtgcgattggctagggaataaactatactggacagactcggaaacaaaccgg
attgaggttgccgaacttgacggctcattcaggaaagttttgttctggcaggacctggac
cagccaagggcaatcgctctggatccgagcagagggtatgtgtactggacagactggggg
gagatcccgaaaattgaaagggcgggtatggatggtacgaaccgagcggtaatcatcgat
acgaatatctactggcccaatgggcttaccttggactacagccagaaaaaactctactgg
gcagatgccaagttcaacttcattcattgctgcaaccttgatggcacagagagagaggtg
gtggtgaagggctcccttccgcacccctttgccctaacactgtacgaggacacactcttc
tggacagattggaatacacactccatccactcatgccagaagcagacgggggaggaacga
cgtgaagtccactcgcacatcttttcgcccatggacattcatgttttcagccaaaaaaga
caaaccatggatgtgatgagtccttgctctctgaaaaatggcggctgttcccacctttgc
ctgctttctccagtaaaaccctactatcagtgtgcctgtcctacaggcgtgcagcttctg
gaagacaacaagacctgcagaaacgaagccacaaagttacttctcctggcacgacgaaca
gacctgcggcggatttctctggatacgccagactttacagacattgtactgcacgccgaa
gacattcggcatgctatcgccatcgattacgaccctgtggacggtcacatctattggaca
gatgacgacgtgcaggctatccggcgctctcagctggatggcagcgagtcgcagcttctc
gtcacttcacaggtaaaccatccagatggcatcgcggtggactggattgcacggaacctt
tactggactgacaccggcacggaccgcatcgaagtgacacgcctcaatggcaccatgagg
aaaatactgatctctgaggacctggatgagcctagagctattgttctggatcctgtcgca
ggacacatgtactggactgactggggggaaacgccaaagattgagcgtgccgctttggat
ggcacagagcgagtggtaatggtgaacacttctctaggctggcccaatggactagcactc
gactacacagaaagaaagatctactggggagatgccaaaactgacaagatcgagatgatg
aatatgaatggaacagaccggaggatcctggttgaggacaaactcccacacatattcggc
ttcaccctcctgggcgactttatctactggacagattggcagcgacggagcattgagcgt
gtgcacaagtctacagctgaaagagaagtgatcattgaccagctgcctgaccttatgggc
ttgaaggccacatacgtccaccaggcatttgggacgaacgcatgtgcagagaacaacgga
ggctgcagtcatctgtgcttgtacaagccgctgggcgtggcgtgtgggtgcccaatcgga
ctggagctcatgggcgacatgagcacctgcatcgtgcccgaggccttcctgcttttctca
cgccatactgacatccgacgcatttcacttgagaccaacaacaacaacgtggccatcccg
cttactggcgtcaaggaggcatcagcgctcgattttgacgttactgacaaccgaatttac
tggacagacataacactaaagaccatcagccgggcgttcatgaacggcagtgcactggag
catgtggtggagtttggcctggactacccagagggcatggcggtggactggctagggaag
aacctctactgggcagacactggaacaaatcgcattgaggtagctaagctggatggccag
cacaggcaagttctggtgtggaaggacctggacagcccacgggcactggcactggaccct
gccgaaggtttcatgtactggactgagtggggtggaagacccaagattgaccgtgctgct
atggatggcacaggtcgtattactcttgtgcccaacgtgggccgtgccaatgggcttacc
atcgactatgctgagaggcggctatactggacagacctggacaccaccctcattgaatct
tctaacatgcttggtcttgagcgtgaagtcattgcagacgatttgccacacccctttggg
ctcacacagtaccaagactacatctactggacagactggagtcagcgcagcattgaacgc
gccaacaaaaccagcgggcagaaccgaacactcatacagggccaccttgactacgtcatg
gacatcctagtgtttcactcctcacgtcagggcggctggaatgcctgcgcctccaccaat
ggccactgctcacacctgtgccttgcggtgcccgtcagcagctatgtgtgcggttgccca
gcccattactctctcaatgatgacaacaaaacctgcagcgcacccacctccttcctgctg
ttcagccaaaagtcagccatcaatcgcatggtgatggatgagcagcagagccctgatatc
atcctccccattcacagcctgcgcaatgtaagagccatcgactacgatccactcgacaag
cagctctactggatcgattcgaagcagaacgtcattcggcgagcccaggaagatggcaat
cagagtatgactgtggtgtctaactcggtgggagggcaccacttaggcctgcagccgttt
gacctgagcatcgacatctacagccgctttatctactggaccagcgaggtgaccaacgtg
atcaacgttacacgcctggatggatcacgtgtgggagtcgtgctgcgcggagagcacgac
aaaccccgtgcaattgtggtcaacccagaaagggggtacatgtacttcactaacctgcag
gagcgttcccctaagatcgagcgtgcggctcttgatggaacagagcgagaagtgctgttc
tttagtggcctgggcaaacctgttgctcttgctatcgacaatgagctaggcaaactcttc
tgggtcgacatggacctccgtcgcatagagagcagcgacctttctggtgccaatcggatc
gtgatcgaggactctaacatcctccagccagtgggcttgactgtgttcgggaatcatttg
tactggattgatcggcagcagcagatgatagagcgcattgacaagataacacgtgagggc
cgaactaaaatccaggcccgcattgcttcactcactgacatccatgctgtccatgacctc
cacatagatgaatacaacaaacacccctgtacctcggataacggaggctgctcccacatt
tgtatagtgaaaggagatggcacaacacgctgctcctgtcctgttcacctggtcctgctg
caagatgaactttcttgtggagagccgcccacctgttctccagagcagttctcctgcgcc
tcaggtgaggtggactgcattccacaagcatggcgctgcgacgggtatgcagagtgcgat
gacgatagcgacgagcgggactgtcctgtttgctcagaccaagagttccaatgtgacagc
aagcagtgcgtggacctttcactgcgctgcaatggaaagatcaactgccaggaccgatca
gacgagaacaagtgcgaagtttattgcccactggatcagtttacctgcaccaatggtcaa
tgcatcggcaaacacaaaaagtgtgaccacaatatggactgtacagacaattcggatgaa
atcggctgctaccccacagaagagccctcgccccagccaaccaacaccattggctcaatt
gtaggcgtggtcatgacactctttgtggtcggcgctatttactttgtgtgccagagggtc
ctgtgcccgcagataaatgaagatgatgaggccatgaccaacgactttgttgtgcacgct
ccgtcttctgtgccactgggctatgtgccacatcccagctctttgtcagggtctctgcca
ggcatgtctcgtgggaagtctgtgatcggctccttgagcattatgggtgggagcagtgga
cctccatatgaccgtgcccatgtcacaggcgcttcctccagcagctcatccagtaccaag
ggcccttacttccctcctatcctgaacccgcccccgtctcctgctacagtgcgctcccag
tacacaatggagtttggctactcgtccaacagtccatccacacatcgctcatacagctac
aggccgtacagctaccgccacttcgcacctccaaccacaccatgcagcacagacgtctgt
gacagtgactacacgccaggtcgccgggcacagccggcttcctccagtgccatagccaag
ggctatgtcagcgatgccaactatgactcagagcccttcccaccccctcccacaccccgc
agccagtacctgtcagctgaggagaactgtgaaagctgtccaccctcaccatacacagag
cgcagctactctcagcatctctaccccccgcccccttcaccttgcaccgactcatcctga
DBGET
integrated database retrieval system
