Trichomycterus rosablanca: 134314156
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Entry
134314156 CDS
T09921
Symbol
fbxo18
Name
(RefSeq) LOW QUALITY PROTEIN: F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134314156 (fbxo18)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134314156 (fbxo18)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134314156 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
AAA_19
UvrD_C_2
F-box
AAA_30
Viral_helicase1
PhoH
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
134314156
NCBI-ProteinID:
XP_062850801
LinkDB
All DBs
Position
1:complement(63459721..63482400)
Genome browser
AA seq
1046 aa
AA seq
DB search
METSLKGKAKRRHLSISECSSLAQSETGSQSITQPFSVNLSNSYQNQGLQPRTPTKRRKN
DGRQQRGITEFFSSAGVLSSSPQKKQKXCMVKTEAGTNGHTVPKEEEVEQEIMMNHMEGI
TEDMFDDDKEFKTDLCSMEKHEAEQGERVAGCSSWACSSTFAFSVGHSNATVKKEEDQYD
VESLPDAHYGLLGLNKNLLEPQGHFQDLPEEVLSVILAHLPAADLYRNISLVCHQWRDIV
MDPQFLPWKKLYCRYEKQEKETVMAIMTILEENRIVKTDDLCVLNMIRYMSQFKHSRRVN
MVDVLSCVKGHRLYAQAEACIKHRLPDMETIDGEPNPWSAMALMIILADGVKDILNLVDR
LQTSGCLVTPDGISEFLWAIATLLLAMRNTNITISNRWHYNVFYVLHLMENAPPPLSQDS
TGRERPIHVTHEQQQILNHDIHKDHVVKIMAFAGTGKTTTLVRYAQQRPDLRLLYIAFNK
SVATQAERSFPSNVKCRTIHSMAYKAVGYRYRQINKLSSNLKPFTVAFVLPKGHGGFVNA
KVITLTINHFCSSTDEFIGPQHVPNRYSNTNGREEHPTEAKKMEFAHDAQKIWNEMAKLK
PTKETAYHMTHDGYLKLWQMQKPVLHDYDVIFIDEAQDCTPVIMDILLSQHCGKILVGDP
HQQIYTFRGAVNALHAVPHTHLYYLTQSFRFGAEIAYIGATILDVCKKVKRLLVGGFQDG
TVRGEDIETLESLRLAHQQVGGKVAILCRSNVTVFSEAVRLTDANPNCKIHIVGGVDNFG
LMKILDIWILMQPDDKRIKEHLWIKDPFIRKFSKDKLGGYAGLKRCATQMEDRELEAKLS
IVKTYNTRIPELVDRIYNCTQGQPDCADYILGTVHKSKGLEFDTVVVADDFIKVPCSRHN
LQRMNINSGIRNSEADEWNLLYVAVTRAKRVLYITKSISNILTLAGEYFLRTELSSTLLN
NDQSCKCSTRECPNQITKEMPLSMHKLPVRYMDSEEMGGVLCARCVEQRIGPMAFLLSPP
DNVKAMHYTEERLELPINISMLLALL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcgctgaaaggcaaggctaaacggaggcacctgagtatatctgagtgcagc
agtttggcccaaagtgaaactggcagccagtctatcacccagccattcagtgtgaacttg
tctaacagttaccaaaatcagggacttcagccaaggacccctactaagagaagaaaaaac
gatggcagacagcagagaggcattacagaattcttctcatctgctggggttctcagcagc
agtccacaaaaaaaacaaaaatgatgcatggtcaaaacagaggccggaacgaatggacat
actgttccaaaggaggaagaagtggaacaagagataatgatgaaccacatggagggcata
acggaggacatgtttgacgatgataaggagtttaagacagatttatgttccatggaaaaa
catgaagcagaacagggtgaaagggtggcaggatgcagcagttgggcatgttcttcaacg
tttgcttttagtgtcggacactctaatgctactgtaaagaaagaggaagaccagtatgat
gtagaaagcctccctgatgctcattatgggttactgggactgaataagaatctgctggag
ccccagggtcactttcaagacttgcctgaggaggtactgagtgttattttggctcacctc
cctgctgccgatctgtatcgcaacatcagtctggtgtgtcatcagtggagagacattgtc
atggatcctcagtttcttccttggaagaagttgtactgcagatatgaaaagcaggaaaaa
gagactgtaatggcaatcatgaccatacttgaagagaaccgcattgttaaaacggatgat
ctttgtgtattaaacatgataaggtacatgtcgcagttcaagcacagcagacgggtgaac
atggtggatgttttgagttgtgtcaaaggccatcgcctctacgcccaggcagaggcctgc
attaagcaccggctgccagacatggagaccattgacggagaaccaaacccttggtctgcc
atggcactcatgattatcctcgcagatggagtaaaagacattttgaatctcgtggatcgg
ttgcaaacctctggctgtttagtgacccctgatgggatttcggagttcctgtgggccatc
gccaccctgcttcttgccatgaggaacacgaacattactatcagcaacaggtggcactac
aatgttttttatgtgcttcacctgatggagaatgcaccaccgcctctgagccaagacagc
acaggccgagagagacctatacatgtcactcatgaacagcaacagatcctcaatcatgat
atccacaaagatcatgtcgtcaagattatggcttttgctggcactgggaagacgacaact
ctggtgagatatgcacaacaaaggccagatctgcgcttactttacatcgccttcaacaaa
tctgtagccacacaggcagaacgcagcttcccttccaatgtgaagtgcaggaccattcac
tctatggcctacaaagctgttggatacaggtacaggcagataaataagctgtccagtaac
ttgaagcccttcacagtggcctttgtgctgcccaagggacatggtggctttgtgaatgcc
aaagtgattacgctaaccatcaaccatttctgctcctccacggacgagttcattggccca
cagcacgtcccaaatcgctacagtaataccaacgggcgtgaggagcacccaaccgaagcc
aaaaaaatggagtttgcacatgacgcacagaagatctggaacgaaatggcaaagctgaaa
cccaccaaagaaacggcttatcacatgacccatgatggctaccttaaattgtggcagatg
cagaagcctgtgcttcatgattatgatgtcatttttattgacgaggctcaggactgcact
ccagtcatcatggacatcttgctctctcaacactgtgggaagatcctggttggagatcct
catcagcagatttacactttcagaggagctgtcaatgctttgcatgctgttccacacaca
cacctctactacttaacacagagttttagatttggcgctgagattgcctacattggtgca
acaatattagatgtgtgcaaaaaggtgaagaggctgttggttggtggattccaggatggc
actgtaagaggagaggacattgagacactggagagtctgagactggctcatcagcaggtt
ggagggaaggtggccattctgtgtcgctctaatgtaactgtgttcagtgaggcggtacgg
cttaccgatgccaatcccaactgcaagatccacattgttggtggtgttgacaattttggg
ctgatgaaaattctggatatctggatcctaatgcagccggatgataaacggataaaagaa
cacttgtggattaaggacccatttatccggaaattctccaaggacaagctgggtggttat
gcaggtctgaagaggtgtgccacgcagatggaagaccgtgagttggaggccaaactctcc
atagtgaagacatacaacacacgcattccagagctggtggatcgcatttacaactgcact
cagggtcagccagactgtgcagattacatcctgggcacagtacataaatctaagggcctg
gagtttgacacagtagtggtggcggacgacttcataaaagtgccctgttcccgtcataac
ctgcagagaatgaacattaactcaggtataaggaactctgaagcagatgagtggaacctg
ttatatgtggctgtgactcgagccaagagagttctgtacatcaccaaaagcatcagcaac
atccttacacttgcaggagaatacttcctgaggacagagctgagcagtacgttgctgaac
aatgatcagtcttgcaaatgcagtaccagagagtgtcccaatcagatcaccaaggagatg
ccactcagcatgcacaaacttcctgtcagatatatggacagtgaagaaatgggaggtgtc
ctttgtgccagatgtgtggaacagcgcataggtcccatggccttcctgctctctccacct
gacaacgtcaaggccatgcattacacagaggaacgacttgagctgcccatcaacatctct
atgctgcttgctctactttaa
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